Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168856915-12860-11714699928.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,457,254 sequences; 1,532,736,548 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig16 Length=433
Score E Sequences producing significant alignments: (Bits) Value gi|34393219|dbj|BAC82933.1| putative Calreticulin precursor [... 209 2e-54 gi|115471369|ref|NP_001059283.1| Os07g0246200 [Oryza sativa (... 209 2e-54 gi|6682833|dbj|BAA88900.1| calcium-binding protein [Oryza sativa 209 2e-54 gi|11131745|sp|P93508|CALR_RICCO Calreticulin precursor >gi|1... 206 2e-53 gi|11131904|sp|Q9XF98|CALR_PRUAR Calreticulin precursor >gi|4... 204 1e-52 gi|577612|emb|CAA86728.1| calcium-binding protein [Zea mays] ... 203 2e-52 gi|11131840|sp|Q9SP22|CALR_MAIZE Calreticulin precursor >gi|6... 203 2e-52 gi|56606827|gb|AAW02798.1| calreticulin-like protein [Triticum a 202 3e-52 gi|439588|gb|AAA32949.1| calreticulin 202 3e-52 gi|439586|gb|AAA32948.1| calreticulin 202 3e-52 gi|11131631|sp|O81919|CALR_BETVU Calreticulin precursor >gi|3... 202 5e-52 gi|92877003|gb|ABE84253.1| Concanavalin A-like lectin/glucana... 200 1e-51 gi|11131769|sp|Q40401|CALR_NICPL Calreticulin precursor >gi|1... 200 2e-51 gi|117165712|dbj|BAF36056.1| calreticulin-1 [Glycine max] 199 2e-51 gi|11131949|sp|Q9ZPP1|CALR_BERST Calreticulin precursor >gi|4... 199 3e-51 gi|732893|emb|CAA59694.1| tobacco calretulin [Nicotiana tabacum] 198 5e-51 gi|115456397|ref|NP_001051799.1| Os03g0832200 [Oryza sativa (... 197 1e-50 gi|9858814|gb|AAG01147.1|AF283816_1 calreticulin [Pinus taeda] 196 2e-50 gi|15217459|ref|NP_172392.1| calcium ion binding [Arabidopsis... 192 3e-49 gi|21555174|gb|AAM63796.1| putative calcium-binding protein, ... 192 3e-49 gi|2052381|gb|AAC49696.1| calreticulin 192 3e-49 gi|1009712|gb|AAA80652.1| calreticulin 192 3e-49 gi|25295763|pir||H86224 hypothetical protein [imported] - Ara... 192 3e-49 gi|12643243|sp|Q38858|CALR2_ARATH Calreticulin-2 precursor 192 3e-49 gi|24417462|gb|AAN60341.1| unknown [Arabidopsis thaliana] 192 5e-49 gi|79320099|ref|NP_001031199.1| CRT1 (CALRETICULIN 1); calciu... 192 5e-49 gi|15223517|ref|NP_176030.1| CRT1 (CALRETICULIN 1); calcium i... 192 5e-49 gi|24417296|gb|AAN60258.1| unknown [Arabidopsis thaliana] 187 1e-47 gi|115456083|ref|NP_001051642.1| Os03g0807400 [Oryza sativa (... 183 2e-46 gi|30103014|gb|AAP21427.1| putative calreticulin [Oryza sativa ( 183 2e-46 gi|108711657|gb|ABF99452.1| Calreticulin family protein, expr... 181 8e-46 gi|6009911|dbj|BAA85118.1| calreticulin-like protein [Solanum me 169 2e-42 gi|92867898|gb|ABE78019.1| Concanavalin A-like lectin/glucanase 155 6e-38 gi|115441595|ref|NP_001045077.1| Os01g0895600 [Oryza sativa (... 154 1e-37 gi|21952848|dbj|BAC06263.1| putative calreticulin [Oryza sativa 154 1e-37 gi|46981282|gb|AAT07600.1| putative calreticulin protein [Ory... 147 1e-35 gi|18390896|ref|NP_563816.1| CRT3 (CALRETICULIN 3); calcium i... 145 7e-35 gi|27311777|gb|AAO00854.1| calreticulin, putative [Arabidopsis t 145 7e-35 gi|42571405|ref|NP_973793.1| CRT3 (CALRETICULIN 3); calcium i... 145 7e-35 gi|12643531|sp|O04153|CALR3_ARATH Calreticulin-3 precursor >g... 145 7e-35 gi|33517365|gb|AAQ19995.1| calreticulin 3 [Brassica rapa subsp. 144 1e-34 gi|575359|emb|CAA57914.1| calreticulin [Parthenium argentatum] 144 1e-34 gi|6664320|gb|AAF22902.1|AC006932_19 T27G7.13 [Arabidopsis thali 122 6e-28 gi|93359544|gb|ABF13298.1| calreticulin [Phaseolus vulgaris] 120 1e-27 gi|11131843|sp|Q9STD3|CALR_CHLRE Calreticulin precursor >gi|5... 115 7e-26 gi|2429343|gb|AAB70919.1| calreticulin [Brassica napus] 69.3 5e-24 gi|115464783|ref|NP_001055991.1| Os05g0507300 [Oryza sativa (... 102 6e-22 gi|4650852|dbj|BAA77025.1| calreticulin [Lithospermum erythrorhi 80.9 2e-15 gi|56744207|dbj|BAD81043.1| calnexin [Glycine max] 60.5 2e-09 gi|3334138|sp|Q39817|CALX_SOYBN Calnexin homolog precursor >gi|6 60.5 2e-09 gi|67077850|dbj|BAD99512.1| calnexin-like protein [Solanum lycop 59.3 5e-09 gi|92879647|gb|ABE85666.1| Calreticulin/calnexin [Medicago trunc 57.8 1e-08 gi|115458184|ref|NP_001052692.1| Os04g0402100 [Oryza sativa (... 57.8 1e-08 gi|11131469|sp|O82709|CALX_PEA Calnexin homolog precursor >gi... 56.6 3e-08 gi|92871101|gb|ABE80216.1| Concanavalin A-like lectin/glucanase 56.2 4e-08 gi|11131766|sp|Q39994|CALX_HELTU Calnexin homolog precursor >... 56.2 4e-08 gi|15240353|ref|NP_200987.1| calcium ion binding [Arabidopsis... 56.2 4e-08 gi|31321896|gb|AAK84429.1| putative papillar cell-specific calne 53.9 2e-07 gi|1181333|emb|CAA54975.1| calreticulin [Zea mays] 52.0 8e-07 gi|473878|gb|AAA17742.1| calnexin homolog 43.1 4e-04 gi|15240773|ref|NP_196351.1| calcium ion binding [Arabidopsis... 43.1 4e-04 gi|399305|sp|P30806|CALR_SPIOL Calreticulin >gi|265784|gb|AAB... 41.2 0.001 gi|116056708|emb|CAL52997.1| Calnexin (ISS) [Ostreococcus tauri] 35.0 0.095 gi|9958061|gb|AAG09550.1|AC011810_9 Hypothetical Protein [Arabid 32.3 0.62 gi|30683308|ref|NP_172804.2| unknown protein [Arabidopsis thalia 32.3 0.62 gi|116057337|emb|CAL51764.1| CREB binding protein/P300 and re... 30.8 1.8 gi|19705584|gb|AAL27709.3|AF433643_1 vacuolar invertase [Citrus 30.8 1.8 gi|115485937|ref|NP_001068112.1| Os11g0568200 [Oryza sativa (... 30.8 1.8 gi|115478635|ref|NP_001062911.1| Os09g0334800 [Oryza sativa (... 29.3 5.2 gi|115435924|ref|NP_001042720.1| Os01g0274800 [Oryza sativa (... 29.3 5.2 gi|15236483|ref|NP_192579.1| L-ascorbate peroxidase [Arabidop... 29.3 5.2 gi|115437992|ref|NP_001043431.1| Os01g0587400 [Oryza sativa (... 28.9 6.8 gi|115481862|ref|NP_001064524.1| Os10g0394400 [Oryza sativa (... 28.9 6.8 gi|53793381|dbj|BAD53040.1| S-receptor kinase-like [Oryza sativa 28.9 6.8
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 11, 2007 5:57 PM Number of letters in database: 101,016,998 Number of sequences in database: 283,237 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283237 Number of Hits to DB: 251 Number of extensions: 3 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 433 Length of database: 101016998 Length adjustment: 102 Effective length of query: 331 Effective length of database: 72126824 Effective search space: 3029326608 Effective search space used: 3029326608 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 62 (28.5 bits)