Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168857060-22776-38316387726.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,457,254 sequences; 1,532,736,548 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig19 Length=356
Score E Sequences producing significant alignments: (Bits) Value gi|72384424|gb|AAZ67540.1| 4D11_26 [Brassica rapa subsp. pekinen 149 2e-36 gi|62701879|gb|AAX92952.1| histone H3 - maize [Oryza sativa (jap 149 2e-36 gi|15232146|ref|NP_189372.1| DNA binding [Arabidopsis thalian... 149 2e-36 gi|55775689|gb|AAV65112.1| histone 3 [Camellia sinensis] 148 5e-36 gi|68342452|gb|AAY90124.1| histone 3 [Rheum australe] 148 5e-36 gi|55977041|sp|P68427|H32_PEA Histone H3.2 >gi|55977043|sp|P6... 148 5e-36 gi|166384|gb|AAA32655.1| histone H3 (H3-1.1) 147 1e-35 gi|116060503|emb|CAL55839.1| Histones H3 and H4 (ISS) [Ostreococ 146 2e-35 gi|119370645|sp|Q402E1|H32_LILLO Histone H3.2 >gi|73808028|db... 146 2e-35 gi|122083|sp|P08903|H32_ENCAL Histone H3.2 >gi|224865|prf||12022 146 2e-35 gi|60543010|dbj|BAD90754.1| histone 3 [Conocephalum conicum] ... 145 4e-35 gi|169793|gb|AAA33907.1| histone 3 >gi|940018|gb|AAA74190.1| his 144 7e-35 gi|60543056|dbj|BAD90777.1| histone 3 [Conocephalum conicum] ... 144 9e-35 gi|72398503|gb|AAZ72657.1| histone H3.3 [Craterostigma plantagin 143 2e-34 gi|60543120|dbj|BAD90809.1| histone 3 [Conocephalum conicum] 143 2e-34 gi|18698662|gb|AAL78367.1|AF467728_1 disease-resistent-related p 143 2e-34 gi|1053047|gb|AAB03538.1| histone H3 >gi|1053049|gb|AAB03539.... 143 2e-34 gi|62642119|gb|AAX92698.1| histone 3 [Picea abies] 143 2e-34 gi|62642121|gb|AAX92699.1| histone 3 [Picea abies] >gi|626421... 143 2e-34 gi|15236103|ref|NP_195713.1| DNA binding [Arabidopsis thalian... 143 2e-34 gi|60543076|dbj|BAD90787.1| histone 3 [Conocephalum conicum] 142 3e-34 gi|60543098|dbj|BAD90798.1| histone 3 [Conocephalum conicum] 142 4e-34 gi|10732809|gb|AAG22548.1|AF304365_1 histone H3 [Rubus idaeus] 142 5e-34 gi|1053059|gb|AAB03543.1| histone H3 142 5e-34 gi|60543074|dbj|BAD90786.1| histone 3 [Conocephalum conicum] 141 8e-34 gi|1053057|gb|AAB03542.1| histone H3 141 8e-34 gi|92880832|gb|ABE85856.1| Histone core [Medicago truncatula] 140 1e-33 gi|33772147|gb|AAQ54510.1| histone 3 [Malus x domestica] 140 1e-33 gi|15238430|ref|NP_201338.1| DNA binding [Arabidopsis thalian... 140 1e-33 gi|60543064|dbj|BAD90781.1| histone 3 [Conocephalum conicum] 140 1e-33 gi|1053045|gb|AAB03537.1| histone H3 140 2e-33 gi|73919914|sp|Q5MYA4|H32_CICIN Histone H3.2 >gi|40217937|gb|... 140 2e-33 gi|1708109|sp|P50564|H3_CHLRE Histone H3 >gi|790700|gb|AAA99965. 140 2e-33 gi|122090|sp|P08437|H3_VOLCA Histone H3 >gi|2119017|pir||S595... 139 2e-33 gi|60543050|dbj|BAD90774.1| histone 3 [Conocephalum supradecompo 139 4e-33 gi|60543024|dbj|BAD90761.1| histone 3 [Conocephalum conicum] 139 4e-33 gi|60543106|dbj|BAD90802.1| histone 3 [Conocephalum conicum] 139 4e-33 gi|60543082|dbj|BAD90790.1| histone 3 [Marchantia polymorpha] 139 4e-33 gi|60543040|dbj|BAD90769.1| histone 3 [Conocephalum supradecompo 139 4e-33 gi|60543052|dbj|BAD90775.1| histone 3 [Conocephalum supradecompo 139 4e-33 gi|60543102|dbj|BAD90800.1| histone 3 [Conocephalum conicum] 139 4e-33 gi|60543112|dbj|BAD90805.1| histone 3 [Conocephalum conicum] 139 4e-33 gi|60543030|dbj|BAD90764.1| histone 3 [Conocephalum conicum] 139 4e-33 gi|119370646|sp|Q402E2|H33A_LILLO Histone H3.3a (Somatic-like... 139 4e-33 gi|73919917|sp|Q5DWI3|H3_MARPO Histone H3 >gi|60543034|dbj|BA... 139 4e-33 gi|576633|gb|AAA98455.1| histone H3 138 5e-33 gi|60543036|dbj|BAD90767.1| histone 3 [Conocephalum supradecompo 138 7e-33 gi|60543104|dbj|BAD90801.1| histone 3 [Conocephalum conicum] 137 9e-33 gi|60543018|dbj|BAD90758.1| histone 3 [Conocephalum conicum] ... 137 9e-33 gi|60543028|dbj|BAD90763.1| histone 3 [Conocephalum conicum] 137 9e-33 gi|60543042|dbj|BAD90770.1| histone 3 [Conocephalum supradecompo 137 1e-32 gi|60543020|dbj|BAD90759.1| histone 3 [Conocephalum conicum] 137 1e-32 gi|60543068|dbj|BAD90783.1| histone 3 [Conocephalum conicum] 137 1e-32 gi|60543058|dbj|BAD90778.1| histone 3 [Conocephalum conicum] 137 1e-32 gi|60543046|dbj|BAD90772.1| histone 3 [Conocephalum supradecompo 137 1e-32 gi|60543012|dbj|BAD90755.1| histone 3 [Conocephalum conicum] 137 1e-32 gi|21555021|gb|AAM63756.1| histone H3 protein, putative [Arabido 136 2e-32 gi|60543060|dbj|BAD90779.1| histone 3 [Conocephalum conicum] 136 3e-32 gi|60543048|dbj|BAD90773.1| histone 3 [Conocephalum supradecompo 136 3e-32 gi|60543110|dbj|BAD90804.1| histone 3 [Conocephalum conicum] 136 3e-32 gi|60543084|dbj|BAD90791.1| histone 3 [Marchantia polymorpha] 136 3e-32 gi|60543014|dbj|BAD90756.1| histone 3 [Conocephalum conicum] 135 3e-32 gi|60543070|dbj|BAD90784.1| histone 3 [Conocephalum conicum] 135 3e-32 gi|60543086|dbj|BAD90792.1| histone 3 [Marchantia polymorpha] 135 3e-32 gi|60543032|dbj|BAD90765.1| histone 3 [Conocephalum conicum] 135 3e-32 gi|60543118|dbj|BAD90808.1| histone 3 [Conocephalum conicum] 135 4e-32 gi|60543116|dbj|BAD90807.1| histone 3 [Conocephalum conicum] 135 4e-32 gi|15222272|ref|NP_172794.1| DNA binding [Arabidopsis thalian... 135 6e-32 gi|9369379|gb|AAF87128.1|AC006434_24 F10A5.19 [Arabidopsis thali 134 1e-31 gi|15222297|ref|NP_177690.1| DNA binding [Arabidopsis thalian... 134 1e-31 gi|119370647|sp|Q2Z2F4|H33B_LILLO Histone H3.3b (Somatic-like... 133 2e-31 gi|60543080|dbj|BAD90789.1| histone 3 [Marchantia polymorpha] 132 3e-31 gi|15223698|ref|NP_173418.1| DNA binding [Arabidopsis thalian... 132 5e-31 gi|82568471|dbj|BAE48436.1| histone soH3-2 [Lilium longiflorum] 131 6e-31 gi|1053053|gb|AAB03541.1| histone H3 130 1e-30 gi|82568467|dbj|BAE48434.1| histone soH3-1 [Lilium longiflorum] 129 2e-30 gi|116057937|emb|CAL54140.1| Histones H3 and H4 (ISS) [Ostreococ 129 3e-30 gi|60543078|dbj|BAD90788.1| histone 3 [Marchantia polymorpha] 129 4e-30 gi|488571|gb|AAB36495.1| histone H3.2 [Medicago sativa] 126 2e-29 gi|19611|emb|CAA31966.1| histone H3 (AA 1-123) [Medicago sati... 124 1e-28 gi|60543066|dbj|BAD90782.1| histone 3 [Conocephalum conicum] 122 4e-28 gi|115466554|ref|NP_001056876.1| Os06g0160000 [Oryza sativa (... 121 6e-28 gi|488573|gb|AAB36496.1| histone H3.2 precursor [Medicago sativa 121 8e-28 gi|76362313|dbj|BAE45285.1| histone [Nephrolepis auriculata] 115 6e-26 gi|76362311|dbj|BAE45284.1| histone [Cornopteris decurrenti-alat 115 6e-26 gi|1197519|emb|CAA64881.1| histone H3 [Narcissus pseudonarcissus 114 1e-25 gi|115488324|ref|NP_001066649.1| Os12g0415800 [Oryza sativa (... 111 7e-25 gi|829279|emb|CAA31967.1| histone H3 (AA 1-120) [Medicago sativa 110 1e-24 gi|76362293|dbj|BAE45275.1| histone [Conocephalum conicum] 108 6e-24 gi|76362285|dbj|BAE45271.1| histone [Conocephalum conicum] 107 2e-23 gi|115488322|ref|NP_001066648.1| Os12g0415400 [Oryza sativa (... 106 2e-23 gi|76362289|dbj|BAE45273.1| histone [Conocephalum conicum] 104 1e-22 gi|4574208|gb|AAD23951.1|AF093108_1 histone H3 [Tortula ruralis] 103 2e-22 gi|87239855|dbj|BAE79475.1| histone 3 [Conocephalum conicum] 103 2e-22 gi|1076583|pir||S51664 histone H3.3 - tomato (fragment) 101 7e-22 gi|34101265|gb|AAQ57670.1| histone H3-D [Amphicarpaea bracteata] 97.8 1e-20 gi|34101270|gb|AAQ57671.1| histone H3-D [Amphicarpaea bracteata] 97.8 1e-20 gi|34101261|gb|AAQ57668.1| histone H3-D [Amphicarpaea bractea... 97.8 1e-20 gi|15239940|ref|NP_196795.1| DNA binding [Arabidopsis thalian... 96.7 2e-20 gi|34101298|gb|AAQ57676.1| histone H3-D [Amphicarpaea bracteata] 95.5 5e-20
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 11, 2007 5:57 PM Number of letters in database: 101,016,998 Number of sequences in database: 283,237 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283237 Number of Hits to DB: 238 Number of extensions: 5 Number of successful extensions: 1 Number of sequences better than 10: 1 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 356 Length of database: 101016998 Length adjustment: 85 Effective length of query: 271 Effective length of database: 76941853 Effective search space: 2539081149 Effective search space used: 2539081149 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)