Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168854708-25275-108865217668.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,457,254 sequences; 1,532,736,548 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig2 Length=203
Score E Sequences producing significant alignments: (Bits) Value gi|59042581|gb|AAW83819.1| GASA2-like protein [Pelargonium zonal 125 6e-29 gi|121689|sp|P27057|GAST1_LYCES GAST1 protein precursor >gi|1... 121 6e-28 gi|2996158|gb|AAC32170.1| GASA5-like protein [Picea mariana] ... 120 1e-27 gi|87241442|gb|ABD33300.1| Gibberellin regulated protein [Medica 120 2e-27 gi|110738064|dbj|BAF00966.1| GAST1-like protein [Arabidopsis tha 119 4e-27 gi|30699033|ref|NP_177605.2| unknown protein [Arabidopsis tha... 119 4e-27 gi|12324817|gb|AAG52379.1|AC011765_31 GAST1-like protein; 109761 119 4e-27 gi|2982285|gb|AAC32128.1| GASA5-like protein [Picea mariana] 119 4e-27 gi|16516821|emb|CAD10104.1| gibberellin induced protein 3 [Petun 118 7e-27 gi|825524|emb|CAA60677.1| gip1 [Petunia x hybrida] 118 7e-27 gi|12003266|gb|AAG43509.1|AF210049_1 gibberellin-induced prot... 118 7e-27 gi|115463571|ref|NP_001055385.1| Os05g0376800 [Oryza sativa (... 117 1e-26 gi|110648737|emb|CAJ77893.1| GASA [Fagus sylvatica] 113 2e-25 gi|56236464|gb|AAV84588.1| Gip1-like protein [Populus tomento... 113 2e-25 gi|55584076|gb|AAQ57667.2| Gasa4-like protein [Pelargonium zonal 112 5e-25 gi|1289320|gb|AAA98520.1| GASA5 111 7e-25 gi|18396367|ref|NP_566186.1| GASA5 [Arabidopsis thaliana] >gi... 111 7e-25 gi|92876699|gb|ABE84043.1| Gibberellin regulated protein [Medica 110 1e-24 gi|48375076|gb|AAT42201.1| gibberellin-stimulated protein [Or... 110 2e-24 gi|115467494|ref|NP_001057346.1| Os06g0266800 [Oryza sativa (... 110 2e-24 gi|1351018|sp|P47926|RSI1_LYCES RSI-1 protein precursor (TR13... 109 3e-24 gi|115479153|ref|NP_001063170.1| Os09g0414900 [Oryza sativa (... 107 1e-23 gi|3201610|gb|AAC20716.1| putative gibberellin-regulated protein 105 5e-23 gi|42569487|ref|NP_180639.2| unknown protein [Arabidopsis tha... 105 5e-23 gi|16516825|emb|CAD10106.1| Gip1-like protein [Petunia x hybrida 105 5e-23 gi|16516823|emb|CAD10105.1| Gip1-like protein [Petunia x hybrida 105 6e-23 gi|950099|gb|AAA74480.1| gibberellin-regulated 99.8 3e-21 gi|15242249|ref|NP_197027.1| GASA4 [Arabidopsis thaliana] >gi... 99.8 3e-21 gi|108707183|gb|ABF94978.1| GAST1 protein precursor, putative... 81.3 1e-15 gi|87241420|gb|ABD33278.1| Gibberellin regulated protein [Medica 78.2 8e-15 gi|66731525|gb|AAY51975.1| GIR1 [Vigna radiata] 71.2 1e-12 gi|15225493|ref|NP_181486.1| unknown protein [Arabidopsis tha... 71.2 1e-12 gi|21592790|gb|AAM64739.1| unknown [Arabidopsis thaliana] 67.8 1e-11 gi|15219934|ref|NP_173683.1| unknown protein [Arabidopsis tha... 67.8 1e-11 gi|14627134|emb|CAC44032.1| snakin-1 [Solanum tuberosum] 67.8 1e-11 gi|15242165|ref|NP_196996.1| unknown protein [Arabidopsis tha... 67.8 1e-11 gi|115464061|ref|NP_001055630.1| Os05g0432200 [Oryza sativa (... 67.4 1e-11 gi|44889867|gb|AAS48461.1| GASA-like protein [Gerbera hybrid cul 67.4 1e-11 gi|98961687|gb|ABF59173.1| unknown protein [Arabidopsis thaliana 67.0 2e-11 gi|98961911|gb|ABF59285.1| unknown protein [Arabidopsis thaliana 67.0 2e-11 gi|18424288|ref|NP_568914.1| unknown protein [Arabidopsis tha... 67.0 2e-11 gi|9757905|dbj|BAB08352.1| unnamed protein product [Arabidopsis 67.0 2e-11 gi|15233953|ref|NP_192699.1| GASA2 [Arabidopsis thaliana] >gi... 66.6 2e-11 gi|15226025|ref|NP_179096.1| unknown protein [Arabidopsis tha... 65.5 5e-11 gi|15233952|ref|NP_192698.1| GASA3 [Arabidopsis thaliana] >gi... 64.7 9e-11 gi|5102600|emb|CAB45241.1| GEG protein [Gerbera hybrid cultivar] 64.7 9e-11 gi|92890175|gb|ABE90192.1| Gibberellin regulated protein [Medica 63.5 2e-10 gi|115455495|ref|NP_001051348.1| Os03g0760800 [Oryza sativa (... 63.5 2e-10 gi|92872830|gb|ABE81382.1| Gibberellin regulated protein [Medica 63.2 3e-10 gi|4102634|gb|AAD01518.1| Snakin-1 [Solanum tuberosum] 63.2 3e-10 gi|82581109|emb|CAJ43591.1| Snakin-like cysteine rich protein [P 62.4 5e-10 gi|3094012|gb|AAC15460.1| cold-regulated LTCOR12 [Lavatera thuri 59.7 3e-09 gi|14625943|emb|CAC44011.1| snakin2 [Solanum tuberosum] 59.7 3e-09 gi|14625945|emb|CAC44012.1| snakin2 [Solanum tuberosum] 59.7 3e-09 gi|2253442|gb|AAB62947.1| LTCOR11 [Lavatera thuringiaca] 59.3 4e-09 gi|115458848|ref|NP_001053024.1| Os04g0465300 [Oryza sativa (... 58.9 5e-09 gi|2792297|gb|AAB97006.1| GAST-like gene product [Fragaria x ana 58.5 7e-09 gi|28274027|gb|AAO33907.1| gibberellin regulated protein [Gos... 58.5 7e-09 gi|92893616|gb|ABE91842.1| Gonadotropin, beta chain; Gibberel... 58.2 9e-09 gi|21618022|gb|AAM67072.1| GAST1-like protein [Arabidopsis thali 57.8 1e-08 gi|22530936|gb|AAM96972.1| expressed protein [Arabidopsis tha... 57.8 1e-08 gi|887939|gb|AAB06310.1| GAST1 protein homolog 57.8 1e-08 gi|25313155|pir||A96787 protein F10A5.6 [imported] - Arabidop... 57.8 1e-08 gi|18410924|ref|NP_565116.1| GASA1 [Arabidopsis thaliana] >gi... 57.8 1e-08 gi|105990544|gb|ABF81694.1| GASA-like protein [Zea mays] 57.4 1e-08 gi|119392328|gb|ABL74292.1| snakin 2 [Solanum tuberosum] 53.9 2e-07 gi|92872481|gb|ABE81096.1| Growth factor, cystine knot; Gibbe... 53.5 2e-07 gi|28274033|gb|AAO33910.1| gibberellin regulated protein [Gossyp 53.1 3e-07 gi|15224170|ref|NP_179433.1| unknown protein [Arabidopsis tha... 52.8 4e-07 gi|115470100|ref|NP_001058649.1| Os06g0729400 [Oryza sativa (... 48.1 9e-06 gi|115473121|ref|NP_001060159.1| Os07g0592000 [Oryza sativa (... 47.4 2e-05 gi|115454073|ref|NP_001050637.1| Os03g0607200 [Oryza sativa (... 45.8 4e-05 gi|92872834|gb|ABE81386.1| BRCT [Medicago truncatula] 40.4 0.002 gi|15230718|ref|NP_190139.1| protein binding / zinc ion bindi... 29.3 4.4 gi|11467826|ref|NP_050877.1| hypothetical chloroplast RF2 [Ne... 28.1 9.7
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 11, 2007 5:57 PM Number of letters in database: 101,016,998 Number of sequences in database: 283,237 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283237 Number of Hits to DB: 124 Number of extensions: 1 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 203 Length of database: 101016998 Length adjustment: 39 Effective length of query: 164 Effective length of database: 89970755 Effective search space: 2519181140 Effective search space used: 2519181140 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)