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BLASTX 2.2.15 [Oct-15-2006]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1168858611-9464-183238994788.BLASTQ4


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,457,254 sequences; 1,532,736,548 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig49
Length=464


Distribution of 30 Blast Hits on the Query Sequence



Related Structures

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|42407684|dbj|BAD08833.1|  putative 60S ribosomal protein L3...   172    5e-43 Gene info
gi|37932221|gb|AAP72960.1|  putative ribosomal protein L31 [Lactu   171    1e-42
gi|14423898|sp|Q9M573|RL31_PERFR  60S ribosomal protein L31 >g...   170    2e-42
gi|54111529|gb|AAV28627.1|  putative 60S ribosomal protein L31 [Z   168    7e-42 UniGene infoGene info
gi|89475536|gb|ABD73300.1|  ribosomal protein L31 [Panax ginseng]   167    2e-41
gi|6094052|sp|O65071|RL31_PICMA  60S ribosomal protein L31 >gi...   167    2e-41
gi|110590380|pdb|2GO5|6  Chain 6, Structure Of Signal Recognit...   166    3e-41 Related structures
gi|56481111|gb|AAV92186.1|  60S ribosomal protein L31a [Pseudo...   166    3e-41
gi|115467818|ref|NP_001057508.1|  Os06g0319700 [Oryza sativa (...   164    2e-40 Gene info
gi|1173027|sp|P46290|RL31_NICGU  60S ribosomal protein L31 >gi...   162    5e-40
gi|115448311|ref|NP_001047935.1|  Os02g0717800 [Oryza sativa (...   160    1e-39 Gene info
gi|14423899|sp|Q9MAV7|RL31_PANGI  60S ribosomal protein L31 >g...   160    2e-39
gi|15236157|ref|NP_194353.1|  structural constituent of riboso...   159    4e-39 UniGene infoGene info
gi|21553532|gb|AAM62625.1|  60S ribosomal protein L31 [Arabidopsi   158    7e-39 UniGene info
gi|15241902|ref|NP_200482.1|  structural constituent of riboso...   158    9e-39 UniGene infoGene info
gi|15224836|ref|NP_179564.1|  structural constituent of riboso...   154    1e-37 UniGene infoGene info
gi|1173024|sp|P45841|RL31_CHLRE  60S ribosomal protein L31 >gi...   121    9e-28
gi|74272613|gb|ABA01102.1|  60S ribosomal protein L31 [Chlamydomo   120    3e-27
gi|6440794|dbj|BAA78583.1|  60S ribosomal protein L31 [Chlamydomo   119    6e-27
gi|115477176|ref|NP_001062184.1|  Os08g0505300 [Oryza sativa (...  84.3    2e-16 Gene info
gi|2996164|gb|AAC32173.1|  putative 60S ribosomal protein L31 [Pi  63.5    3e-10
gi|2996162|gb|AAC32172.1|  putative 60S ribosomal protein L31 [Pi  63.5    3e-10
gi|6049118|gb|AAF02462.1|AF127445_1  putative 60S ribosomal prote  63.5    3e-10
gi|6049120|gb|AAF02463.1|AF127446_1  putative 60S ribosomal prote  63.5    3e-10
gi|37776907|emb|CAD23146.1|  ribosomal protein L31 [Oryza sativa]  49.3    6e-06 UniGene info
gi|116060100|emb|CAL56159.1|  60S ribosomal protein L31 (ISS) [Os  43.5    3e-04
gi|115437564|ref|NP_001043325.1|  Os01g0556600 [Oryza sativa (...  30.0    3.7   Gene info
gi|15237677|ref|NP_201239.1|  transcription factor/ transcript...  29.6    4.8   UniGene infoGene info
gi|116056664|emb|CAL52953.1|  Predicted esterase of the alpha-...  29.3    6.3  
gi|115478955|ref|NP_001063071.1|  Os09g0385800 [Oryza sativa (...  29.3    6.3   Gene info
Alignments
>gi|42407684|dbj|BAD08833.1| Gene info putative 60S ribosomal protein L31 [Oryza sativa (japonica cultivar-group)] gi|42408913|dbj|BAD10170.1| Gene info putative 60S ribosomal protein L31 [Oryza sativa (japonica cultivar-group)] Length=122 Score = 172 bits (436), Expect = 5e-43 Identities = 104/122 (85%), Positives = 110/122 (90%), Gaps = 1/122 (0%) Frame = +1 Query 49 MVEK-ASKGRKEEVVTREYTINLHKRLHGCTFKKMAPKAIKEIRKFAQKSMGTTDVRIDV 225 MVEK RKEEVVTREYTINLHKRLH CTFKK AP AIKEIRKFAQK+MGTTDVR+DV Sbjct 1 MVEKKGGAARKEEVVTREYTINLHKRLHSCTFKKKAPNAIKEIRKFAQKAMGTTDVRVDV 60 Query 226 KLNKHLWSrgirgvprrvrvriarkrNEEEDAKEELYSLVTVAEVPPEGLKGLGTXIVEE 405 KLNKH+WS GIR VPRRVRVRIARKRN+EEDAKEELYSLVTVAEVPPEGLKGLGT +V+E Sbjct 61 KLNKHIWSSGIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPPEGLKGLGTKVVDE 120 Query 406 AD 411 D Sbjct 121 TD 122 >gi|37932221|gb|AAP72960.1| putative ribosomal protein L31 [Lactuca sativa] Length=120 Score = 171 bits (433), Expect = 1e-42 Identities = 102/121 (84%), Positives = 115/121 (95%), Gaps = 1/121 (0%) Frame = +1 Query 49 MVEKASKGRKEEVVTREYTINLHKRLHGCTFKKMAPKAIKEIRKFAQKSMGTTDVRIDVK 228 MV+K +KGRKEEVVTREYTINLHKRLHGCTFKK APKAIKEIRKFAQK+MGTTDVR+DVK Sbjct 1 MVDK-TKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVK 59 Query 229 LNKHLWSrgirgvprrvrvriarkrNEEEDAKEELYSLVTVAEVPPEGLKGLGTXIVEEA 408 LNK++WSRGIR VPRRVRVRIARKRN++EDAKEELYSLVTVAE+P EGLKGLGT ++++ Sbjct 60 LNKYVWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIDDE 119 Query 409 D 411 D Sbjct 120 D 120 >gi|14423898|sp|Q9M573|RL31_PERFR 60S ribosomal protein L31 gi|7229709|gb|AAF42953.1|AF237624_1 80S ribosomal protein L31 [Perilla frutescens] Length=121 Score = 170 bits (431), Expect = 2e-42 Identities = 99/121 (81%), Positives = 112/121 (92%), Gaps = 0/121 (0%) Frame = +1 Query 49 MVEKASKGRKEEVVTREYTINLHKRLHGCTFKKMAPKAIKEIRKFAQKSMGTTDVRIDVK 228 M +K SK RKEEVV+REYTINLHKRLHGCTFKK APKAIKEIRKFAQK+MGTTDVR+DVK Sbjct 1 MADKGSKPRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVK 60 Query 229 LNKHLWSrgirgvprrvrvriarkrNEEEDAKEELYSLVTVAEVPPEGLKGLGTXIVEEA 408 LNKH+WSRGIR VPRR+RVRIARKRN++EDAKEELYSLVTVAE+P GLKGLGT +++E Sbjct 61 LNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPEGGLKGLGTQVIDEE 120 Query 409 D 411 + Sbjct 121 E 121 >gi|54111529|gb|AAV28627.1| UniGene infoGene info putative 60S ribosomal protein L31 [Zea mays] Length=124 Score = 168 bits (426), Expect = 7e-42 Identities = 101/124 (81%), Positives = 110/124 (88%), Gaps = 3/124 (2%) Frame = +1 Query 49 MVEKASK---GRKEEVVTREYTINLHKRLHGCTFKKMAPKAIKEIRKFAQKSMGTTDVRI 219 M EK + RK+EVVTREYTINLHKRLHGCTFKK AP AIKEIRKFAQK+MGTTD+RI Sbjct 1 MAEKKQRPGGSRKDEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDIRI 60 Query 220 DVKLNKHLWSrgirgvprrvrvriarkrNEEEDAKEELYSLVTVAEVPPEGLKGLGTXIV 399 DVKLNKH+WS GIR VPRRVRVRIARKRN+EEDAKEELYSLVTVAE+P EGLKGLGT +V Sbjct 61 DVKLNKHIWSSGIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVV 120 Query 400 EEAD 411 +E D Sbjct 121 DETD 124 >gi|89475536|gb|ABD73300.1| ribosomal protein L31 [Panax ginseng] Length=121 Score = 167 bits (422), Expect = 2e-41 Identities = 101/121 (83%), Positives = 112/121 (92%), Gaps = 1/121 (0%) Frame = +1 Query 49 MVEKASKGRKEEVVTREYTINLHKRLHGCTFKKMAPKAIKEIRKFAQKSMGTTDVRIDVK 228 MV+KASKGRKEEVVTREYTINLH+RLHGCTFKK AP AIKEIRKFAQK+MGTTDVR+D K Sbjct 1 MVDKASKGRKEEVVTREYTINLHRRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRVDAK 60 Query 229 LNKHLWSrgirgvprrvrvriarkrNEEEDAKEELYSLVTVAEVPPEGLKGLGTXIVEEA 408 LNK +WSRGIR VPRRVRVRIARKRN+EEDAKEELYSLVTVA+ PEGLKGLGT I+++ Sbjct 61 LNKQIWSRGIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVADT-PEGLKGLGTKIIDDE 119 Query 409 D 411 + Sbjct 120 E 120 >gi|6094052|sp|O65071|RL31_PICMA 60S ribosomal protein L31 gi|2982295|gb|AAC32133.1| probable 60S ribosomal protein L31 [Picea mariana] Length=120 Score = 167 bits (422), Expect = 2e-41 Identities = 99/121 (81%), Positives = 111/121 (91%), Gaps = 1/121 (0%) Frame = +1 Query 49 MVEKASKGRKEEVVTREYTINLHKRLHGCTFKKMAPKAIKEIRKFAQKSMGTTDVRIDVK 228 MVEK K R+ EV TREYTINLH+RLHGCTFKKMAPKA+KEIRKFAQK+MGTTDVR+DVK Sbjct 1 MVEKG-KSRRNEVATREYTINLHRRLHGCTFKKMAPKAVKEIRKFAQKAMGTTDVRLDVK 59 Query 229 LNKHLWSrgirgvprrvrvriarkrNEEEDAKEELYSLVTVAEVPPEGLKGLGTXIVEEA 408 LNK +WSRGIR VPRR+RVRI+RKRN+EEDAK+ELYS+VTVAEVPPEGL GLGT I+EE Sbjct 60 LNKAVWSRGIRSVPRRMRVRISRKRNDEEDAKDELYSIVTVAEVPPEGLTGLGTKIIEEE 119 Query 409 D 411 D Sbjct 120 D 120 >gi|110590380|pdb|2GO5|6 Related structures Chain 6, Structure Of Signal Recognition Particle Receptor (Sr) In Complex With Signal Recognition Particle (Srp) And Ribosome Nascent Chain Complex gi|119390383|pdb|2J37|6 Related structures Chain 6, Model Of Mammalian Srp Bound To 80s Rncs Length=123 Score = 166 bits (421), Expect = 3e-41 Identities = 99/119 (83%), Positives = 108/119 (90%), Gaps = 0/119 (0%) Frame = +1 Query 55 EKASKGRKEEVVTREYTINLHKRLHGCTFKKMAPKAIKEIRKFAQKSMGTTDVRIDVKLN 234 ++A RK+EVVTREYT+NLHKRLHGCTFKK AP AIKEIRKFAQK+MGT DVRIDVKLN Sbjct 5 KRAPGPRKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLN 64 Query 235 KHLWSrgirgvprrvrvriarkrNEEEDAKEELYSLVTVAEVPPEGLKGLGTXIVEEAD 411 KH+WS GIR VPRRVRVRIARKRN+EEDAKEELYSLVTVAEVP EGLKGLGT +VE+ D Sbjct 65 KHIWSSGIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED 123 >gi|56481111|gb|AAV92186.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gi|56481113|gb|AAV92187.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gi|56481115|gb|AAV92188.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gi|56481117|gb|AAV92189.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gi|56481119|gb|AAV92190.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gi|56481121|gb|AAV92191.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gi|56481123|gb|AAV92192.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gi|56481125|gb|AAV92193.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gi|56481127|gb|AAV92194.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gi|56481129|gb|AAV92195.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gi|56481131|gb|AAV92196.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gi|56481133|gb|AAV92197.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gi|56481135|gb|AAV92198.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gi|56481137|gb|AAV92199.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gi|56481139|gb|AAV92200.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gi|56481141|gb|AAV92201.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gi|56481143|gb|AAV92202.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gi|56481145|gb|AAV92203.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gi|56481147|gb|AAV92204.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gi|56481149|gb|AAV92205.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gi|56481151|gb|AAV92206.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gi|56481153|gb|AAV92207.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gi|56481155|gb|AAV92208.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gi|56481157|gb|AAV92209.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gi|56481159|gb|AAV92210.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gi|56481161|gb|AAV92211.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gi|56481163|gb|AAV92212.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] gi|56481165|gb|AAV92213.1| 60S ribosomal protein L31a [Pseudotsuga menziesii var. menziesii] Length=113 Score = 166 bits (421), Expect = 3e-41 Identities = 97/113 (85%), Positives = 107/113 (94%), Gaps = 0/113 (0%) Frame = +1 Query 73 RKEEVVTREYTINLHKRLHGCTFKKMAPKAIKEIRKFAQKSMGTTDVRIDVKLNKHLWSr 252 R++EVVTREYTINLHKRLHGCTFKKMAPKA+KEIRKFAQK MGTTDVR+DVKLNK +WSR Sbjct 1 RRDEVVTREYTINLHKRLHGCTFKKMAPKAVKEIRKFAQKVMGTTDVRLDVKLNKSVWSR 60 Query 253 girgvprrvrvriarkrNEEEDAKEELYSLVTVAEVPPEGLKGLGTXIVEEAD 411 GIR VPRR+RVRI+RKRN+EEDAKEELYS+VTVAEVPPEGL GLGT +VEE D Sbjct 61 GIRSVPRRMRVRISRKRNDEEDAKEELYSIVTVAEVPPEGLSGLGTKVVEEED 113 >gi|115467818|ref|NP_001057508.1| Gene info Os06g0319700 [Oryza sativa (japonica cultivar-group)] gi|54290930|dbj|BAD61612.1| Gene info putative 60S ribosomal protein L31 [Oryza sativa (japonica cultivar-group)] gi|113595548|dbj|BAF19422.1| Gene info Os06g0319700 [Oryza sativa (japonica cultivar-group)] Length=124 Score = 164 bits (414), Expect = 2e-40 Identities = 99/122 (81%), Positives = 108/122 (88%), Gaps = 3/122 (2%) Frame = +1 Query 49 MVEKASK---GRKEEVVTREYTINLHKRLHGCTFKKMAPKAIKEIRKFAQKSMGTTDVRI 219 M EK + RK+EVVTREYTINLHKRLHGCTFKK AP AIKEIRKFAQK+MGT DVR+ Sbjct 1 MAEKKQRPGGARKDEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTIDVRV 60 Query 220 DVKLNKHLWSrgirgvprrvrvriarkrNEEEDAKEELYSLVTVAEVPPEGLKGLGTXIV 399 DVKLNKH+WS GIR VPRRVRVRIAR+RN+EEDAKEELYSLVTVAEVP EGLKGLGT +V Sbjct 61 DVKLNKHIWSSGIRSVPRRVRVRIARRRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKLV 120 Query 400 EE 405 E+ Sbjct 121 ED 122 >gi|1173027|sp|P46290|RL31_NICGU 60S ribosomal protein L31 gi|915313|gb|AAA80638.1| ribosomal protein L31 Length=120 Score = 162 bits (410), Expect = 5e-40 Identities = 97/116 (83%), Positives = 107/116 (92%), Gaps = 0/116 (0%) Frame = +1 Query 64 SKGRKEEVVTREYTINLHKRLHGCTFKKMAPKAIKEIRKFAQKSMGTTDVRIDVKLNKHL 243 +KGRKEEVVTREYTINLHKRLH CTFKK AP AIKEIRKFAQK+MGT DVR+DVKLNK + Sbjct 5 TKGRKEEVVTREYTINLHKRLHSCTFKKKAPTAIKEIRKFAQKAMGTKDVRVDVKLNKQI 64 Query 244 WSrgirgvprrvrvriarkrNEEEDAKEELYSLVTVAEVPPEGLKGLGTXIVEEAD 411 WSRGIR VPRRVRVRIARKRN++EDAKEELYSLVTVAE+P +GLKGLGT I+E+ D Sbjct 65 WSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAEIPAKGLKGLGTKIIEDED 120 >gi|115448311|ref|NP_001047935.1| Gene info Os02g0717800 [Oryza sativa (japonica cultivar-group)] gi|45735864|dbj|BAD12898.1| Gene info putative 60S ribosomal protein L31 [Oryza sativa (japonica cultivar-group)] gi|113537466|dbj|BAF09849.1| Gene info Os02g0717800 [Oryza sativa (japonica cultivar-group)] Length=123 Score = 160 bits (406), Expect = 1e-39 Identities = 94/113 (83%), Positives = 105/113 (92%), Gaps = 0/113 (0%) Frame = +1 Query 73 RKEEVVTREYTINLHKRLHGCTFKKMAPKAIKEIRKFAQKSMGTTDVRIDVKLNKHLWSr 252 RK+EVVTREYTINLHKRLHGCTFKK AP AIKEIRKFAQK+MGTTD+RIDVKLNK +W+ Sbjct 11 RKDEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDIRIDVKLNKAIWTN 70 Query 253 girgvprrvrvriarkrNEEEDAKEELYSLVTVAEVPPEGLKGLGTXIVEEAD 411 GIR VPRRVRVRI+RKRN+EEDAKEELYSLVTVAE+P EGLKGLGT +VE+ + Sbjct 71 GIRSVPRRVRVRISRKRNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVEDEE 123 >gi|14423899|sp|Q9MAV7|RL31_PANGI 60S ribosomal protein L31 gi|8131703|dbj|BAA96368.1| ribosomal protein L31 [Panax ginseng] Length=121 Score = 160 bits (405), Expect = 2e-39 Identities = 100/121 (82%), Positives = 109/121 (90%), Gaps = 1/121 (0%) Frame = +1 Query 49 MVEKASKGRKEEVVTREYTINLHKRLHGCTFKKMAPKAIKEIRKFAQKSMGTTDVRIDVK 228 MVEK +KGRKEEVVTREYTINLHKRLHGCTFKK AP AIKEIRKFAQK+MGT DVR+DVK Sbjct 1 MVEK-TKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTKDVRVDVK 59 Query 229 LNKHLWSrgirgvprrvrvriarkrNEEEDAKEELYSLVTVAEVPPEGLKGLGTXIVEEA 408 LNK +WSRGIR VPRRVRVRIARKRN++EDAKEELYSLVTVA++P LKGLG I+EE Sbjct 60 LNKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAKIPAGTLKGLGPQIIEED 119 Query 409 D 411 D Sbjct 120 D 120 >gi|15236157|ref|NP_194353.1| UniGene infoGene info structural constituent of ribosome [Arabidopsis thaliana] gi|14423879|sp|Q9STR1|RL312_ARATH Gene info 60S ribosomal protein L31-2 gi|4539419|emb|CAB38952.1| Gene info putative ribosomal protein [Arabidopsis thaliana] gi|7269474|emb|CAB79478.1| Gene info putative ribosomal protein [Arabidopsis thaliana] gi|21553368|gb|AAM62461.1| UniGene infoGene info putative ribosomal protein [Arabidopsis thaliana] gi|29028794|gb|AAO64776.1| UniGene infoGene info At4g26230 [Arabidopsis thaliana] gi|110736498|dbj|BAF00217.1| Gene info putative ribosomal protein [Arabidopsis thaliana] Length=119 Score = 159 bits (402), Expect = 4e-39 Identities = 92/115 (80%), Positives = 104/115 (90%), Gaps = 0/115 (0%) Frame = +1 Query 67 KGRKEEVVTREYTINLHKRLHGCTFKKMAPKAIKEIRKFAQKSMGTTDVRIDVKLNKHLW 246 KGRKEEVVTREYTINLH+RLH CTFKK APKAIKEIRKFA+K MGT DVR+DVKLNK +W Sbjct 5 KGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLNKQIW 64 Query 247 SrgirgvprrvrvriarkrNEEEDAKEELYSLVTVAEVPPEGLKGLGTXIVEEAD 411 S+GIRG PRR+RVR+ARKRN++EDAKEE +SLVTVAE+P EGL GLGT I+EE D Sbjct 65 SKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119 >gi|21553532|gb|AAM62625.1| UniGene info 60S ribosomal protein L31 [Arabidopsis thaliana] Length=119 Score = 158 bits (400), Expect = 7e-39 Identities = 91/115 (79%), Positives = 105/115 (91%), Gaps = 0/115 (0%) Frame = +1 Query 67 KGRKEEVVTREYTINLHKRLHGCTFKKMAPKAIKEIRKFAQKSMGTTDVRIDVKLNKHLW 246 KGRKEEV+TREYTINLH+RLH CTFKK APKAIKEIRKFA+K+MGT DVRIDVKLNK +W Sbjct 5 KGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRIDVKLNKQIW 64 Query 247 SrgirgvprrvrvriarkrNEEEDAKEELYSLVTVAEVPPEGLKGLGTXIVEEAD 411 S+GIRG PRR+RVR+ARKRN++EDAKEE +SLVTVAE+P EGL GLGT ++EE D Sbjct 65 SKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119 >gi|15241902|ref|NP_200482.1| UniGene infoGene info structural constituent of ribosome [Arabidopsis thaliana] gi|19884146|sp|P51420|RL313_ARATH Gene info 60S ribosomal protein L31-3 gi|10176775|dbj|BAB09889.1| Gene info 60S ribosomal protein L31 [Arabidopsis thaliana] gi|15215729|gb|AAK91410.1| UniGene infoGene info AT5g56710/MIK19_16 [Arabidopsis thaliana] gi|21700813|gb|AAM70530.1| UniGene infoGene info AT5g56710/MIK19_16 [Arabidopsis thaliana] Length=119 Score = 158 bits (399), Expect = 9e-39 Identities = 90/115 (78%), Positives = 105/115 (91%), Gaps = 0/115 (0%) Frame = +1 Query 67 KGRKEEVVTREYTINLHKRLHGCTFKKMAPKAIKEIRKFAQKSMGTTDVRIDVKLNKHLW 246 KGRKEEV+TREYTINLH+RLH CTFKK APKAIKEIRKFA+K+MGT DVR+DVKLNK +W Sbjct 5 KGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIW 64 Query 247 SrgirgvprrvrvriarkrNEEEDAKEELYSLVTVAEVPPEGLKGLGTXIVEEAD 411 S+GIRG PRR+RVR+ARKRN++EDAKEE +SLVTVAE+P EGL GLGT ++EE D Sbjct 65 SKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119 >gi|15224836|ref|NP_179564.1| UniGene infoGene info structural constituent of ribosome [Arabidopsis thaliana] gi|75266051|sp|Q9SLL7|RL311_ARATH Gene info 60S ribosomal protein L31-1 gi|3687244|gb|AAC62142.1| Gene info 60S ribosomal protein L31 [Arabidopsis thaliana] gi|15450425|gb|AAK96506.1| UniGene infoGene info At2g19740/F6F22.23 [Arabidopsis thaliana] gi|15451072|gb|AAK96807.1| UniGene infoGene info 60S ribosomal protein L31 [Arabidopsis thaliana] gi|16974433|gb|AAL31220.1| UniGene infoGene info At2g19740/F6F22.23 [Arabidopsis thaliana] gi|18377416|gb|AAL66874.1| UniGene infoGene info 60S ribosomal protein L31 [Arabidopsis thaliana] Length=119 Score = 154 bits (389), Expect = 1e-37 Identities = 89/115 (77%), Positives = 103/115 (89%), Gaps = 0/115 (0%) Frame = +1 Query 67 KGRKEEVVTREYTINLHKRLHGCTFKKMAPKAIKEIRKFAQKSMGTTDVRIDVKLNKHLW 246 KGRKEEVVTREYTINLH+RLH CTFKK AP AIKEIRKFA K+MGT DVR+DVKLNK +W Sbjct 5 KGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLNKQIW 64 Query 247 SrgirgvprrvrvriarkrNEEEDAKEELYSLVTVAEVPPEGLKGLGTXIVEEAD 411 S+GIRG PRR+RVR+ARKRN++EDAKEE +SLVTVAE+P EGL GLGT ++EE + Sbjct 65 SKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE 119 >gi|1173024|sp|P45841|RL31_CHLRE 60S ribosomal protein L31 gi|18209|emb|CAA47044.1| UniGene info ribosomal protein L31 [Chlamydomonas reinhardtii] Length=116 Score = 121 bits (304), Expect = 9e-28 Identities = 73/114 (64%), Positives = 93/114 (81%), Gaps = 2/114 (1%) Frame = +1 Query 67 KGRKEEVVTREYTINLHKRLHGCTFKKMAPKAIKEIRKFAQKSMGTTDVRIDVKLNKHLW 246 K R +E VTREYTI+L KRLH +FKK APKA+KEIRKFA K MGT+DVR+DVKLNK +W Sbjct 5 KSRSKEQVTREYTIHLSKRLHKTSFKKCAPKAVKEIRKFASKVMGTSDVRLDVKLNKAVW 64 Query 247 SrgirgvprrvrvriarkrNEEEDAKEELYSLVTVAEVPPEGLKGLGTXIVEEA 408 S+GI+ VP R+R+ I+R+RN++EDAKEE+YS VTVAE + KG GT +V++A Sbjct 65 SKGIKNVPTRLRIVISRRRNDDEDAKEEMYSFVTVAE--DQSTKGKGTVVVQDA 116 >gi|74272613|gb|ABA01102.1| 60S ribosomal protein L31 [Chlamydomonas incerta] Length=116 Score = 120 bits (300), Expect = 3e-27 Identities = 74/114 (64%), Positives = 92/114 (80%), Gaps = 2/114 (1%) Frame = +1 Query 67 KGRKEEVVTREYTINLHKRLHGCTFKKMAPKAIKEIRKFAQKSMGTTDVRIDVKLNKHLW 246 K R +E VTREYTI+L KRL +FKK APKA+KEIRKFA K MGTTDVR+DVKLNK +W Sbjct 5 KSRSKEQVTREYTIHLSKRLQKTSFKKCAPKAVKEIRKFASKVMGTTDVRLDVKLNKAVW 64 Query 247 SrgirgvprrvrvriarkrNEEEDAKEELYSLVTVAEVPPEGLKGLGTXIVEEA 408 S+GIR VP R+R+ I+R+RN++EDAKEE+YS VTVAE + KG GT +V++A Sbjct 65 SKGIRNVPTRLRIVISRRRNDDEDAKEEMYSFVTVAE--DQSTKGKGTVVVQDA 116 >gi|6440794|dbj|BAA78583.1| 60S ribosomal protein L31 [Chlamydomonas sp. HS-5] Length=116 Score = 119 bits (297), Expect = 6e-27 Identities = 69/114 (60%), Positives = 94/114 (82%), Gaps = 2/114 (1%) Frame = +1 Query 67 KGRKEEVVTREYTINLHKRLHGCTFKKMAPKAIKEIRKFAQKSMGTTDVRIDVKLNKHLW 246 +G+ ++VVTREYTINLHKR H TFKK APKA+K+IR+FA K MGT+DVR+DVKLNK +W Sbjct 5 EGKSKDVVTREYTINLHKRCHKTTFKKKAPKAVKQIREFAMKMMGTSDVRLDVKLNKAVW 64 Query 247 SrgirgvprrvrvriarkrNEEEDAKEELYSLVTVAEVPPEGLKGLGTXIVEEA 408 S+GI+ VP RVR++++R+RN+ EDAKE++Y+ VTVA+ + KG GT +V +A Sbjct 65 SQGIKNVPTRVRIQVSRRRNDNEDAKEDMYAFVTVAD--DQTTKGKGTVVVADA 116 >gi|115477176|ref|NP_001062184.1| Gene info Os08g0505300 [Oryza sativa (japonica cultivar-group)] gi|113624153|dbj|BAF24098.1| Gene info Os08g0505300 [Oryza sativa (japonica cultivar-group)] Length=66 Score = 84.3 bits (207), Expect = 2e-16 Identities = 57/66 (86%), Positives = 62/66 (93%), Gaps = 0/66 (0%) Frame = +1 Query 214 RIDVKLNKHLWSrgirgvprrvrvriarkrNEEEDAKEELYSLVTVAEVPPEGLKGLGTX 393 R+DVKLNKH+WS GIR VPRRVRVRIARKRN+EEDAKEELYSLVTVAEVPPEGLKGLGT Sbjct 1 RVDVKLNKHIWSSGIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPPEGLKGLGTK 60 Query 394 IVEEAD 411 +V+E D Sbjct 61 VVDETD 66 >gi|2996164|gb|AAC32173.1| putative 60S ribosomal protein L31 [Picea mariana] Length=49 Score = 63.5 bits (153), Expect = 3e-10 Identities = 29/36 (80%), Positives = 33/36 (91%), Gaps = 0/36 (0%) Frame = +1 Query 304 NEEEDAKEELYSLVTVAEVPPEGLKGLGTXIVEEAD 411 N+EEDAK+ELYS+VTVAEVPPEGL GLGT I+EE D Sbjct 14 NDEEDAKDELYSIVTVAEVPPEGLTGLGTKIIEEED 49 >gi|2996162|gb|AAC32172.1| putative 60S ribosomal protein L31 [Picea mariana] Length=55 Score = 63.5 bits (153), Expect = 3e-10 Identities = 29/36 (80%), Positives = 33/36 (91%), Gaps = 0/36 (0%) Frame = +1 Query 304 NEEEDAKEELYSLVTVAEVPPEGLKGLGTXIVEEAD 411 N+EEDAK+ELYS+VTVAEVPPEGL GLGT I+EE D Sbjct 20 NDEEDAKDELYSIVTVAEVPPEGLTGLGTKIIEEED 55 >gi|6049118|gb|AAF02462.1|AF127445_1 putative 60S ribosomal protein L31 [Picea abies] Length=52 Score = 63.5 bits (153), Expect = 3e-10 Identities = 29/36 (80%), Positives = 33/36 (91%), Gaps = 0/36 (0%) Frame = +1 Query 304 NEEEDAKEELYSLVTVAEVPPEGLKGLGTXIVEEAD 411 N+EEDAK+ELYS+VTVAEVPPEGL GLGT I+EE D Sbjct 17 NDEEDAKDELYSIVTVAEVPPEGLTGLGTKIIEEED 52 >gi|6049120|gb|AAF02463.1|AF127446_1 putative 60S ribosomal protein L31 [Picea abies] Length=53 Score = 63.5 bits (153), Expect = 3e-10 Identities = 29/36 (80%), Positives = 33/36 (91%), Gaps = 0/36 (0%) Frame = +1 Query 304 NEEEDAKEELYSLVTVAEVPPEGLKGLGTXIVEEAD 411 N+EEDAK+ELYS+VTVAEVPPEGL GLGT I+EE D Sbjct 18 NDEEDAKDELYSIVTVAEVPPEGLTGLGTKIIEEED 53 >gi|37776907|emb|CAD23146.1| UniGene info ribosomal protein L31 [Oryza sativa] Length=29 Score = 49.3 bits (116), Expect = 6e-06 Identities = 23/29 (79%), Positives = 26/29 (89%), Gaps = 0/29 (0%) Frame = +1 Query 325 EELYSLVTVAEVPPEGLKGLGTXIVEEAD 411 EELYSLVTVAEVP EGLKGLGT +VE+ + Sbjct 1 EELYSLVTVAEVPAEGLKGLGTKVVEDEE 29 >gi|116060100|emb|CAL56159.1| 60S ribosomal protein L31 (ISS) [Ostreococcus tauri] Length=95 Score = 43.5 bits (101), Expect = 3e-04 Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 26/94 (27%) Frame = +1 Query 196 MGTTDVRIDVKLNKHLWSrgirgvprrvrvriarkr------------------------ 303 M T+DVRIDVKLNK +WS+GIR V + K Sbjct 1 MKTSDVRIDVKLNKAVWSKGIRNVRFERLSARSAKGRLTRFTFSSRAQVPKRIRVQISRK 60 Query 304 -NEEEDAKEELYSLVTVAEVPPEGLKGLGTXIVE 402 N+ +DA E+LYS VTV + P G GLGT +++ Sbjct 61 HNDNKDADEDLYSYVTVVDT-PNGFSGLGTDVID 93 >gi|115437564|ref|NP_001043325.1| Gene info Os01g0556600 [Oryza sativa (japonica cultivar-group)] gi|113532856|dbj|BAF05239.1| Gene info Os01g0556600 [Oryza sativa (japonica cultivar-group)] Length=1932 Score = 30.0 bits (66), Expect = 3.7 Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 10/48 (20%) Frame = +3 Query 276 GPCEDCP----------QKKRGGGCKRRALLFGYCCRGSSRRFKGVRN 389 GP +CP + K+G +R +L+ CCRG + K + N Sbjct 307 GPSHECPHCGAVFWYQERVKKGSVVSQRKILYNLCCRGGANIDKTINN 354 >gi|15237677|ref|NP_201239.1| UniGene infoGene info transcription factor/ transcription regulator [Arabidopsis thaliana] gi|9759410|dbj|BAB09865.1| Gene info unnamed protein product [Arabidopsis thaliana] gi|17064970|gb|AAL32639.1| UniGene infoGene info Unknown protein [Arabidopsis thaliana] gi|20259970|gb|AAM13332.1| UniGene infoGene info unknown protein [Arabidopsis thaliana] Length=348 Score = 29.6 bits (65), Expect = 4.8 Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 10/77 (12%) Frame = +3 Query 138 F*EDGSEGH*GD----------KKVRAEVNGHDGCQD*CEAQQASLEQGDPRRAETGPCE 287 F EDG E H D +++ A + D D CE+ + G G C Sbjct 142 FKEDGEEFHKSDGTESEMHEDTEEINALLYSDDDYDDDCESDDEVMSTGHSPYPNEGVCN 201 Query 288 DCPQKKRGGGCKRRALL 338 ++ G CKR+ LL Sbjct 202 KRELEEIDGPCKRQKLL 218 >gi|116056664|emb|CAL52953.1| Predicted esterase of the alpha-beta hydrolase superfamily (Neuropathy target esterase), contains cAMP-binding domains (ISS) [Ostreococcus tauri] Length=1102 Score = 29.3 bits (64), Expect = 6.3 Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 9/49 (18%) Frame = +1 Query 82 EVVTREYTINLHKR--------LHGCTFKKMAPKAIKEIRKFAQKSMGT 204 E++TRE+ IN+H R HG T+ +M A+++ + + K++ T Sbjct 917 EIITREHRINMHLRPPGISSWMTHGLTYSQM-DAAVRKAQAYTNKAIVT 964 >gi|115478955|ref|NP_001063071.1| Gene info Os09g0385800 [Oryza sativa (japonica cultivar-group)] gi|113631304|dbj|BAF24985.1| Gene info Os09g0385800 [Oryza sativa (japonica cultivar-group)] Length=279 Score = 29.3 bits (64), Expect = 6.3 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%) Frame = -2 Query 319 HPPPRFFCGQSSHGP-VSARLGSPCSRDA 236 HPPP FFC H P + A +P + DA Sbjct 10 HPPPSFFCASRPHCPALLAAAAAPAAFDA 38
  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 11, 2007  5:57 PM
  Number of letters in database: 101,016,998
  Number of sequences in database:  283,237
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283237
Number of Hits to DB: 254
Number of extensions: 3
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 464
Length of database: 101016998
Length adjustment: 103
Effective length of query: 361
Effective length of database: 71843587
Effective search space: 3664022937
Effective search space used: 3664022937
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 62 (28.5 bits)