Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168854994-20098-24862473387.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,457,254 sequences; 1,532,736,548 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig5 Length=414
Score E Sequences producing significant alignments: (Bits) Value gi|10720220|sp|Q41249|PORA_CUCSA Protochlorophyllide reductas... 121 9e-28 gi|81946|pir||S20941 protochlorophyllide reductase (EC 1.3.1.... 108 8e-24 gi|266742|sp|Q01289|POR_PEA Protochlorophyllide reductase, ch... 105 5e-23 gi|58003345|gb|AAW62234.1| NADPH-protochlorophyllide oxidoreduct 102 3e-22 gi|10720233|sp|Q9SDT1|POR_DAUCA Protochlorophyllide reductase... 101 7e-22 gi|9049763|gb|AAF82471.1| light dependent NADH:protochlorophy... 99.8 3e-21 gi|10720236|sp|Q42850|PORB_HORVU Protochlorophyllide reductas... 97.1 2e-20 gi|15234129|ref|NP_194474.1| PORB (PROTOCHLOROPHYLLIDE OXIDOR... 95.9 4e-20 gi|21593167|gb|AAM65116.1| protochlorophyllide reductase precurs 95.5 5e-20 gi|21068893|dbj|BAB93003.1| NADPH:protochlorophyllide oxidoreduc 92.4 4e-19 gi|21068895|dbj|BAB93004.1| NADPH:protochlorophyllide oxidoreduc 92.4 4e-19 gi|18071421|gb|AAL58280.1|AC068923_22 putative dehydrogenase ... 91.7 8e-19 gi|968975|gb|AAC49043.1| NADPH:protochlorophyllide oxidoreduc... 90.9 1e-18 gi|15239574|ref|NP_200230.1| PORA; oxidoreductase/ protochlor... 90.5 2e-18 gi|79316418|ref|NP_001030948.1| POR (PROTOCHLOROPHYLLIDE OXID... 89.0 5e-18 gi|15218860|ref|NP_171860.1| POR (PROTOCHLOROPHYLLIDE OXIDORE... 87.8 1e-17 gi|13699822|gb|AAD20020.2| NADPH-protochlorophyllide oxidoreduct 82.8 4e-16 gi|9587209|gb|AAF89208.1|AF279251_1 NADPH-protochlorophyllide ox 82.8 4e-16 gi|7330644|gb|AAC60560.2| NADPH-protochlorophyllide-oxidoreducta 80.1 2e-15 gi|46019982|emb|CAD99008.1| NADPH-protochlorophyllide oxidoreduc 71.6 8e-13 gi|90398977|emb|CAJ86249.1| H0801D08.7 [Oryza sativa (indica ... 63.5 2e-10 gi|115461348|ref|NP_001054274.1| Os04g0678700 [Oryza sativa (... 63.5 2e-10 gi|117662246|gb|ABK55691.1| chloroplast NADPH-protochlorophyl... 62.4 5e-10 gi|129708|sp|P13653|PORA_HORVU Protochlorophyllide reductase ... 61.6 8e-10 gi|10720235|sp|Q41578|PORA_WHEAT Protochlorophyllide reductas... 61.2 1e-09 gi|75755841|gb|ABA26980.1| TO34-2rc [Taraxacum officinale] 53.9 2e-07 gi|34915980|dbj|BAC87880.1| Protochlorophyllide reductase chl... 47.0 2e-05 gi|34915978|dbj|BAC87879.1| Protochlorophyllide reductase chl... 46.6 3e-05 gi|10720231|sp|O80333|POR_MARPA Protochlorophyllide reductase... 45.4 6e-05 gi|5821263|dbj|BAA83744.1| NADPH-protochlorophyllide oxidoreduct 45.4 6e-05 gi|116310874|emb|CAH67815.1| OSIGBa0138H21-OSIGBa0138E01.6 [O... 31.6 0.93 gi|58531980|emb|CAE03622.2| OSJNBb0003B01.13 [Oryza sativa (japo 31.6 0.93 gi|13676400|dbj|BAB41189.1| NADPH-protochlorophyllide oxidore... 31.6 0.93 gi|129707|sp|P15904|POR_AVESA Protochlorophyllide reductase (... 31.6 0.93 gi|13676404|dbj|BAB41191.1| NADPH-protochlorophyllide oxidore... 30.8 1.6 gi|115475880|ref|NP_001061536.1| Os08g0322200 [Oryza sativa (... 30.0 2.7 gi|55168040|gb|AAV43908.1| putative polyprotein [Oryza sativa (j 30.0 2.7 gi|55167963|gb|AAV43832.1| putative polyprotein [Oryza sativa (j 30.0 2.7 gi|116059542|emb|CAL55249.1| Fibrillins and related proteins ... 29.6 3.5 gi|115445233|ref|NP_001046396.1| Os02g0237300 [Oryza sativa (... 29.6 3.5 gi|10720232|sp|Q39617|POR_CHLRE Protochlorophyllide reductase... 29.6 3.5 gi|77556933|gb|ABA99729.1| retrotransposon protein, putative,... 29.3 4.6 gi|92896501|gb|ABE93231.1| Polynucleotidyl transferase, Ribon... 28.5 7.9 gi|92895695|gb|ABE92800.1| RNA-directed DNA polymerase (Rever... 28.5 7.9 gi|90399111|emb|CAC09465.2| H0423H10.11 [Oryza sativa (indica cu 28.5 7.9 gi|21902110|dbj|BAC05657.1| putatitive retrotransposon Cinful... 28.5 7.9
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 11, 2007 5:57 PM Number of letters in database: 101,016,998 Number of sequences in database: 283,237 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283237 Number of Hits to DB: 261 Number of extensions: 9 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 414 Length of database: 101016998 Length adjustment: 101 Effective length of query: 313 Effective length of database: 72410061 Effective search space: 2679172257 Effective search space used: 2679172257 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)