Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168921303-5369-187491242211.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig82 Length=490
Score E Sequences producing significant alignments: (Bits) Value gi|18076088|emb|CAC80550.1| cyclophilin [Ricinus communis] 226 3e-59 gi|52788398|gb|AAU87301.1| cyclophilin [Pinus halepensis] 223 2e-58 gi|1563719|emb|CAA69622.1| cyclophylin [Digitalis lanata] 223 3e-58 gi|4559302|gb|AAD22975.1|AF126551_1 cyclophilin [Solanum tube... 222 4e-58 gi|38708272|gb|AAR27291.1| cyclophilin [Thellungiella halophila] 222 6e-58 gi|18376589|emb|CAC81066.1| putative cyclosporin A-binding prote 222 6e-58 gi|2443757|gb|AAB71402.1| cyclophilin [Arabidopsis thaliana] 221 8e-58 gi|15226467|ref|NP_179709.1| peptidyl-prolyl cis-trans isomer... 221 8e-58 gi|6014890|sp|O49886|CYPH_LUPLU Peptidyl-prolyl cis-trans iso... 221 1e-57 gi|90704803|dbj|BAE92296.1| putative peptidyl-prolyl cis-tran... 221 1e-57 gi|3334157|sp|Q39613|CYPH_CATRO Peptidyl-prolyl cis-trans iso... 220 2e-57 gi|21886603|emb|CAC84116.1| peptidylprolyl isomerase (cyclophili 220 2e-57 gi|117372731|gb|ABK34279.1| cyclophilin [Solanum sogarandinum] 219 5e-57 gi|1561575|emb|CAA69598.1| cyclophilin [Digitalis lanata] 219 5e-57 gi|119367479|gb|ABL67655.1| putative cyclophilin [Citrus cv. Shi 217 1e-56 gi|17981611|gb|AAL51087.1|AF456323_1 cyclophilin [Glycine max] 217 1e-56 gi|62728587|gb|AAX94775.1| cyclophilin [Cucumis sativus] 217 1e-56 gi|118103|sp|P21568|CYPH_LYCES Peptidyl-prolyl cis-trans isom... 217 1e-56 gi|829119|emb|CAA52414.1| cyclophilin [Phaseolus vulgaris] 217 2e-56 gi|15227259|ref|NP_179251.1| ROC3; peptidyl-prolyl cis-trans ... 217 2e-56 gi|37722431|gb|AAN72439.1| cyclophilin [Kandelia candel] 214 9e-56 gi|29124975|gb|AAO63777.1| cyclophilin [Populus tremuloides] 214 9e-56 gi|1928939|gb|AAB51386.1| stress responsive cyclophilin [Solanum 214 2e-55 gi|18146786|dbj|BAB82452.1| CYP1 [Vigna radiata] 213 2e-55 gi|3063396|dbj|BAA25755.1| vcCyP [Vicia faba] 213 2e-55 gi|51235021|gb|AAT98376.1| peptidyl-prolyl cis-trans isomeras... 213 3e-55 gi|13925734|gb|AAK49427.1|AF262983_1 cyclophilin A-2 [Triticu... 213 4e-55 gi|13925731|gb|AAK49426.1|AF262982_1 cyclophilin A-1 [Triticu... 212 5e-55 gi|15236211|ref|NP_195213.1| ROC5; peptidyl-prolyl cis-trans ... 212 5e-55 gi|1345921|sp|P24525|CYPH_BRANA Peptidyl-prolyl cis-trans iso... 210 2e-54 gi|41387716|gb|AAS01735.1| putative cyclophilin [Populus alba... 209 3e-54 gi|118104|sp|P21569|CYPH_MAIZE Peptidyl-prolyl cis-trans isom... 209 3e-54 gi|167138|gb|AAA62706.1| cyclophilin 207 1e-53 gi|15234781|ref|NP_195585.1| ROC1; peptidyl-prolyl cis-trans ... 207 2e-53 gi|115443875|ref|NP_001045717.1| Os02g0121300 [Oryza sativa (... 207 2e-53 gi|600769|gb|AAA57046.1| cyclophilin 2 204 1e-52 gi|55247974|gb|AAV48823.1| cyclophilin 1; CyP1 [Codonopsis lance 202 4e-52 gi|2959712|gb|AAC05639.1| cyclophilin 1 [Chlamydomonas reinhardt 202 4e-52 gi|42565453|gb|AAS20994.1| cyclophilin [Hyacinthus orientalis] 201 8e-52 gi|7649161|gb|AAF65770.1|AF242312_1 cyclophilin [Euphorbia esula 201 1e-51 gi|1305457|gb|AAB96833.1| cytosolic cyclophilin [Arabidopsis tha 200 2e-51 gi|939726|gb|AAA74096.1| cyclophilin 200 2e-51 gi|15228814|ref|NP_191166.1| ROC2; peptidyl-prolyl cis-trans ... 200 2e-51 gi|115480799|ref|NP_001063993.1| Os09g0571400 [Oryza sativa (... 197 1e-50 gi|9885808|gb|AAG01536.1|AF291180_1 cyclophilin CACYP1 [Capsicum 185 6e-47 gi|32351008|gb|AAP76508.1| cyclophilin [Triticum aestivum] >g... 182 5e-46 gi|82621146|gb|ABB86261.1| cyclophilin ROC7-like [Solanum tubero 180 3e-45 gi|2443755|gb|AAB71401.1| cyclophilin [Arabidopsis thaliana] 178 7e-45 gi|115469872|ref|NP_001058535.1| Os06g0708500 [Oryza sativa (... 178 7e-45 gi|53792606|dbj|BAD53621.1| putative cyclophilin [Oryza sativ... 178 7e-45 gi|15227674|ref|NP_180557.1| CYP5; peptidyl-prolyl cis-trans ... 178 7e-45 gi|544125|sp|P35627|CYPX_USEUD Peptidyl-prolyl cis-trans isom... 177 2e-44 gi|45680882|gb|AAS75310.1| multidomain cyclophilin type pepti... 177 2e-44 gi|15229425|ref|NP_191899.1| ATP binding / peptidyl-prolyl ci... 177 2e-44 gi|30695789|ref|NP_850740.1| ATP binding / peptidyl-prolyl ci... 177 2e-44 gi|115467098|ref|NP_001057148.1| Os06g0216800 [Oryza sativa (... 177 2e-44 gi|461902|sp|P34887|CYPH_ALLCE Peptidyl-prolyl cis-trans isom... 176 3e-44 gi|21554007|gb|AAM63088.1| cyclophilin [Arabidopsis thaliana] 176 4e-44 gi|15237739|ref|NP_200679.1| ROC7; peptidyl-prolyl cis-trans ... 174 2e-43 gi|18410386|ref|NP_567029.1| peptidyl-prolyl cis-trans isomer... 172 4e-43 gi|56694218|gb|AAW22880.1| putative cyclophilin [Lycopersicon es 172 7e-43 gi|115469870|ref|NP_001058534.1| Os06g0708400 [Oryza sativa (... 168 8e-42 gi|115448829|ref|NP_001048194.1| Os02g0761100 [Oryza sativa (... 167 1e-41 gi|18397936|ref|NP_565381.1| SQN (SQUINT) [Arabidopsis thalia... 164 1e-40 gi|115480397|ref|NP_001063792.1| Os09g0537600 [Oryza sativa (... 164 2e-40 gi|37788310|gb|AAP44536.1| cyclophilin-like protein [Triticum ae 161 1e-39 gi|116055831|emb|CAL57916.1| Cyclophilin type peptidyl-prolyl... 160 2e-39 gi|116058302|emb|CAL53491.1| HSP90 co-chaperone CPR7/Cyclophilin 159 5e-39 gi|21555831|gb|AAM63944.1| peptidylprolyl isomerase ROC4 [Arabid 158 8e-39 gi|15228674|ref|NP_191762.1| ROC4; peptidyl-prolyl cis-trans ... 158 8e-39 gi|15224944|ref|NP_181407.1| peptidyl-prolyl cis-trans isomer... 157 1e-38 gi|11762200|gb|AAG40378.1|AF325026_1 AT3g62030 [Arabidopsis thal 157 2e-38 gi|115456145|ref|NP_001051673.1| Os03g0811600 [Oryza sativa (... 155 5e-38 gi|74272691|gb|ABA01141.1| peptidylprolyl isomerase/cyclophil... 155 7e-38 gi|4454307|emb|CAA10766.1| cyclophilin [Pseudotsuga menziesii] 155 7e-38 gi|13486733|dbj|BAB39968.1| putative peptidyl-prolyl cis-tran... 154 1e-37 gi|92879371|gb|ABE85500.1| Peptidyl-prolyl cis-trans isomeras... 154 2e-37 gi|113202130|gb|ABI33223.1| cyclophilin [Camellia sinensis] 153 3e-37 gi|21593963|gb|AAM65904.1| peptidylprolyl isomerase-like protein 152 7e-37 gi|115481190|ref|NP_001064188.1| Os10g0154700 [Oryza sativa (... 152 7e-37 gi|9955556|emb|CAC05440.1| peptidylprolyl isomerase-like protein 152 7e-37 gi|15240008|ref|NP_196816.1| peptidyl-prolyl cis-trans isomer... 152 7e-37 gi|37788312|gb|AAP44537.1| cyclophilin-like protein [Triticum ae 150 2e-36 gi|115461585|ref|NP_001054392.1| Os05g0103200 [Oryza sativa (... 150 2e-36 gi|6014889|sp|Q41651|CYPB_VICFA Peptidyl-prolyl cis-trans iso... 149 4e-36 gi|37788308|gb|AAP44535.1| cyclophilin-like protein [Triticum ae 149 6e-36 gi|116059591|emb|CAL55298.1| HSP90 co-chaperone CPR7/Cyclophilin 148 8e-36 gi|15236227|ref|NP_195222.1| peptidyl-prolyl cis-trans isomer... 147 1e-35 gi|115436026|ref|NP_001042771.1| Os01g0284700 [Oryza sativa (... 146 3e-35 gi|7573487|emb|CAB87846.1| cyclophilin-like protein [Arabidopsis 146 3e-35 gi|116060727|emb|CAL57205.1| HSP90 co-chaperone CPR7/Cyclophilin 145 9e-35 gi|83700344|gb|ABC41018.1| chloroplast-localized cyclophilin [Tr 144 2e-34 gi|83700338|gb|ABC41015.1| chloroplast-localized cyclophilin [Tr 143 3e-34 gi|116058882|emb|CAL54589.1| Cyclophilin-type peptidyl-prolyl... 141 1e-33 gi|83700342|gb|ABC41017.1| chloroplast-localized cyclophilin [Tr 141 1e-33 gi|92893217|gb|ABE91669.1| Peptidyl-prolyl cis-trans isomeras... 140 3e-33 gi|38566732|emb|CAE76635.1| cyclophilin-type peptidyl-prolyl ... 137 1e-32 gi|116060180|emb|CAL56239.1| HSP90 co-chaperone CPR7/Cyclophilin 136 3e-32 gi|14334173|gb|AAK60569.1|AF384147_1 cyclophilin [Triticum aesti 134 1e-31 gi|82547214|gb|ABB82362.1| cyclophilin [Triticum aestivum] 134 2e-31
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 297 Number of extensions: 1 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 490 Length of database: 101054579 Length adjustment: 104 Effective length of query: 386 Effective length of database: 71586283 Effective search space: 4223590697 Effective search space used: 4223590697 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 63 (28.9 bits)