RID=1168921344-30642-76073601025.BLASTQ1, Contig84

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168921344-30642-76073601025.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig84
Length=440

Distribution of 32 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|3169719|gb|AAC17938.1|  similar to yeast dcp1 [Arabidopsis tha   151    7e-37 
gi|18390886|ref|NP_563814.1|  unknown protein [Arabidopsis tha...   151    7e-37 
gi|77745454|gb|ABB02626.1|  unknown [Solanum tuberosum]             143    2e-34
gi|6664305|gb|AAF22887.1|AC006932_4  T27G7.7 [Arabidopsis thalian   136    3e-32
gi|62701653|gb|AAX92726.1|  Dcp1-like decapping family, putati...   130    1e-30
gi|115487422|ref|NP_001066198.1|  Os12g0156400 [Oryza sativa (...   129    4e-30 
gi|115471387|ref|NP_001059292.1|  Os07g0249600 [Oryza sativa (...   118    7e-27 
gi|28376714|gb|AAO41144.1|  hypothetical protein [Oryza sativa (j   101    9e-22 
gi|116060457|emb|CAL55793.1|  Decapping enzyme complex compone...  60.8    2e-09
gi|115489494|ref|NP_001067234.1|  Os12g0607400 [Oryza sativa (...  33.9    0.22  
gi|108705711|gb|ABF93506.1|  expressed protein [Oryza sativa (jap  32.3    0.65 
gi|3831447|gb|AAC69930.1|  putative extensin [Arabidopsis thal...  32.3    0.65 
gi|42408193|dbj|BAD09330.1|  hypothetical protein [Oryza sativ...  31.6    1.1   
gi|115456457|ref|NP_001051829.1|  Os03g0837000 [Oryza sativa (...  31.2    1.4   
gi|29788817|gb|AAP03363.1|  hypothetical protein [Oryza sativa (j  31.2    1.4   
gi|115485621|ref|NP_001067954.1|  Os11g0507500 [Oryza sativa (...  30.0    3.2   
gi|27542759|gb|AAO16692.1|  putative Xa1-like protein [Sorghum bi  30.0    3.2  
gi|42407583|dbj|BAD10814.1|  hypothetical protein [Oryza sativ...  30.0    3.2   
gi|115455189|ref|NP_001051195.1|  Os03g0736600 [Oryza sativa (...  29.6    4.2   
gi|77553980|gb|ABA96776.1|  transposon protein, putative, uncl...  29.6    4.2  
gi|31432300|gb|AAP53950.1|  transposon protein, putative, uncl...  29.6    4.2   
gi|55167934|gb|AAV43803.1|  unknown protein [Oryza sativa (japoni  29.3    5.5  
gi|15226430|ref|NP_179692.1|  PEARLI4 [Arabidopsis thaliana] >...  29.3    5.5   
gi|871782|gb|AAC37472.1|  pEARLI 4 gene product                    29.3    5.5   
gi|38344116|emb|CAE01723.2|  OSJNBb0050O03.13 [Oryza sativa (japo  28.9    7.2   
gi|15222149|ref|NP_175372.1|  structural constituent of cell w...  28.9    7.2   
gi|81051959|gb|ABB55313.1|  hypothetical protein 12.t00024 [Aspar  28.9    7.2  
gi|77555994|gb|ABA98790.1|  retrotransposon protein, putative,...  28.9    7.2  
gi|91214143|ref|YP_538765.1|  RNA polymerase beta' subunit [Gl...  28.9    7.2   
gi|54290272|dbj|BAD61217.1|  hypothetical protein [Oryza sativ...  28.9    7.2  
gi|115479817|ref|NP_001063502.1|  Os09g0482300 [Oryza sativa (...  28.9    7.2   
gi|51038162|gb|AAT93965.1|  hypothetical protein [Oryza sativa...  28.5    9.4

Alignments

 

>gi|3169719|gb|AAC17938.1|  similar to yeast dcp1 [Arabidopsis thaliana]
Length=370

 Score =  151 bits (382),  Expect = 7e-37
 Identities = 73/83 (87%), Positives = 79/83 (95%), Gaps = 0/83 (0%)
 Frame = +2

Query  191  MSQNGKLMPNLDHQSTKLLNLTVLQRIDPYVEEILITAAHVTFYEFNIELNQWSRKDVEG  370
            MSQNGK++PNLD  ST+LLNLTVLQRIDPY+EEILITAAHVTFYEFNIEL+QWSRKDVEG
Sbjct  1    MSQNGKIIPNLDQNSTRLLNLTVLQRIDPYIEEILITAAHVTFYEFNIELSQWSRKDVEG  60

Query  371  SLFVVKRNTQPXFQFIVMNRRXT  439
            SLFVVKR+TQP FQFIVMNRR T
Sbjct  61   SLFVVKRSTQPRFQFIVMNRRNT  83


>gi|18390886|ref|NP_563814.1|  unknown protein [Arabidopsis thaliana]
 gi|67460429|sp|Q9SJF3|DCP1_ARATH  mRNA decapping enzyme-like protein (DCP1 homolog)
Length=367

 Score =  151 bits (382),  Expect = 7e-37
 Identities = 73/83 (87%), Positives = 79/83 (95%), Gaps = 0/83 (0%)
 Frame = +2

Query  191  MSQNGKLMPNLDHQSTKLLNLTVLQRIDPYVEEILITAAHVTFYEFNIELNQWSRKDVEG  370
            MSQNGK++PNLD  ST+LLNLTVLQRIDPY+EEILITAAHVTFYEFNIEL+QWSRKDVEG
Sbjct  1    MSQNGKIIPNLDQNSTRLLNLTVLQRIDPYIEEILITAAHVTFYEFNIELSQWSRKDVEG  60

Query  371  SLFVVKRNTQPXFQFIVMNRRXT  439
            SLFVVKR+TQP FQFIVMNRR T
Sbjct  61   SLFVVKRSTQPRFQFIVMNRRNT  83


>gi|77745454|gb|ABB02626.1|  unknown [Solanum tuberosum]
Length=369

 Score =  143 bits (361),  Expect = 2e-34
 Identities = 69/83 (83%), Positives = 77/83 (92%), Gaps = 0/83 (0%)
 Frame = +2

Query  191  MSQNGKLMPNLDHQSTKLLNLTVLQRIDPYVEEILITAAHVTFYEFNIELNQWSRKDVEG  370
            MSQNGKLMPNLD  STKLLNLTVLQRIDP++EEILITAAHVT YEF+I+ +QWSRKD+EG
Sbjct  1    MSQNGKLMPNLDQNSTKLLNLTVLQRIDPFIEEILITAAHVTLYEFSIDNSQWSRKDIEG  60

Query  371  SLFVVKRNTQPXFQFIVMNRRXT  439
            SLFVVKR++QP FQFIVMNRR T
Sbjct  61   SLFVVKRSSQPRFQFIVMNRRNT  83


>gi|6664305|gb|AAF22887.1|AC006932_4  T27G7.7 [Arabidopsis thaliana]
Length=396

 Score =  136 bits (342),  Expect = 3e-32
 Identities = 73/112 (65%), Positives = 79/112 (70%), Gaps = 29/112 (25%)
 Frame = +2

Query  191  MSQNGKLMPNLDHQSTKLLNLTVLQRIDPYVEEILITAAHVTFYEFNIELNQWSRKDVEG  370
            MSQNGK++PNLD  ST+LLNLTVLQRIDPY+EEILITAAHVTFYEFNIEL+QWSRKDVEG
Sbjct  1    MSQNGKIIPNLDQNSTRLLNLTVLQRIDPYIEEILITAAHVTFYEFNIELSQWSRKDVEG  60

Query  371  SLFVVK-----------------------------RNTQPXFQFIVMNRRXT  439
            SLFVVK                             R+TQP FQFIVMNRR T
Sbjct  61   SLFVVKRLLLSIFNYVYLIFNRLLKSDWILFFVSFRSTQPRFQFIVMNRRNT  112


>gi|62701653|gb|AAX92726.1|  Dcp1-like decapping family, putative [Oryza sativa (japonica 
cultivar-group)]
 gi|77548732|gb|ABA91529.1|  mRNA decapping enzyme, putative, expressed [Oryza sativa (japonica 
cultivar-group)]
Length=380

 Score =  130 bits (328),  Expect = 1e-30
 Identities = 65/84 (77%), Positives = 73/84 (86%), Gaps = 2/84 (2%)
 Frame = +2

Query  194  SQNGKLMPNL--DHQSTKLLNLTVLQRIDPYVEEILITAAHVTFYEFNIELNQWSRKDVE  367
            +  GK+ PNL  D + T+LLNLTVLQR+DP VE+ILITAAHVT Y+FNI+LNQWSRKDVE
Sbjct  19   ANGGKVTPNLTMDAEGTRLLNLTVLQRLDPAVEDILITAAHVTLYDFNIDLNQWSRKDVE  78

Query  368  GSLFVVKRNTQPXFQFIVMNRRXT  439
            GSLFVVKRNTQP FQFIVMNRR T
Sbjct  79   GSLFVVKRNTQPRFQFIVMNRRNT  102


>gi|115487422|ref|NP_001066198.1|  Os12g0156400 [Oryza sativa (japonica cultivar-group)]
 gi|108862222|gb|ABA96497.2|  Dcp1-like decapping family protein, expressed [Oryza sativa (japonica 
cultivar-group)]
 gi|113648705|dbj|BAF29217.1|  Os12g0156400 [Oryza sativa (japonica cultivar-group)]
Length=374

 Score =  129 bits (324),  Expect = 4e-30
 Identities = 65/81 (80%), Positives = 71/81 (87%), Gaps = 2/81 (2%)
 Frame = +2

Query  203  GKLMPNL--DHQSTKLLNLTVLQRIDPYVEEILITAAHVTFYEFNIELNQWSRKDVEGSL  376
            GK+ PNL  D + T+LLNLTVLQR+DP VE+ILITAAHVT Y+FNIELNQWSRKDVEGSL
Sbjct  14   GKVTPNLAMDAEGTRLLNLTVLQRLDPAVEDILITAAHVTLYDFNIELNQWSRKDVEGSL  73

Query  377  FVVKRNTQPXFQFIVMNRRXT  439
            FVVKRN QP FQFIVMNRR T
Sbjct  74   FVVKRNKQPRFQFIVMNRRNT  94


>gi|115471387|ref|NP_001059292.1|  Os07g0249600 [Oryza sativa (japonica cultivar-group)]
 gi|33146979|dbj|BAC80052.1|  putative transcription factor [Oryza sativa (japonica cultivar-group)]
 gi|113610828|dbj|BAF21206.1|  Os07g0249600 [Oryza sativa (japonica cultivar-group)]
Length=382

 Score =  118 bits (296),  Expect = 7e-27
 Identities = 57/80 (71%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
 Frame = +2

Query  206  KLMPNL--DHQSTKLLNLTVLQRIDPYVEEILITAAHVTFYEFNIELNQWSRKDVEGSLF  379
            K+ PNL  D + T++LN+TVLQR+DP VE+ILITA HVT Y+F+  LNQWSRKDVEGSLF
Sbjct  10   KVTPNLAMDEEGTRVLNITVLQRLDPAVEDILITAGHVTLYDFDTNLNQWSRKDVEGSLF  69

Query  380  VVKRNTQPXFQFIVMNRRXT  439
            VVKRN QP FQF+VMNRR T
Sbjct  70   VVKRNAQPRFQFVVMNRRNT  89


>gi|28376714|gb|AAO41144.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length=143

 Score =  101 bits (252),  Expect = 9e-22
 Identities = 48/72 (66%), Positives = 58/72 (80%), Gaps = 0/72 (0%)
 Frame = +2

Query  224  DHQSTKLLNLTVLQRIDPYVEEILITAAHVTFYEFNIELNQWSRKDVEGSLFVVKRNTQP  403
            D + T+ LNLTVL+R+DP V +ILI AAHV  Y F+  ++QWSR+ VEGSLFVVKRNTQP
Sbjct  23   DQEGTRTLNLTVLRRLDPAVADILIIAAHVVLYSFDDNIHQWSRRPVEGSLFVVKRNTQP  82

Query  404  XFQFIVMNRRXT  439
             FQFIVMNR+ T
Sbjct  83   RFQFIVMNRKNT  94


>gi|116060457|emb|CAL55793.1|  Decapping enzyme complex component DCP1 (ISS) [Ostreococcus tauri]
Length=261

 Score = 60.8 bits (146),  Expect = 2e-09
 Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 0/62 (0%)
 Frame = +2

Query  245  LNLTVLQRIDPYVEEILITAAHVTFYEFNIELNQWSRKDVEGSLFVVKRNTQPXFQFIVM  424
            +NLTVL+  D  +E I+  + H   Y F++    W RK VEG+LFVV+R++ P   F+V+
Sbjct  25   MNLTVLRASDASIESIVAQSKHCVLYGFDVNSRSWVRKSVEGALFVVRRSSAPRDAFVVL  84

Query  425  NR  430
            NR
Sbjct  85   NR  86


>gi|115489494|ref|NP_001067234.1|  Os12g0607400 [Oryza sativa (japonica cultivar-group)]
 gi|113649741|dbj|BAF30253.1|  Os12g0607400 [Oryza sativa (japonica cultivar-group)]
Length=322

 Score = 33.9 bits (76),  Expect = 0.22
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +1

Query  184  CEDVAKRKADAQPRSPEHQAAQPHR-PPADRSLRRGDPDNRGPCHLLRIQHRAQPM  348
            C    +R+A  +  + +H  + P+R P A   +R  +PDN    HLL ++  AQP+
Sbjct  131  CHRHPRREARRRHLASQHTDSLPNRWPQASVRVRAPEPDNHDSLHLLAVELAAQPV  186


>gi|108705711|gb|ABF93506.1|  expressed protein [Oryza sativa (japonica cultivar-group)]
Length=318

 Score = 32.3 bits (72),  Expect = 0.65
 Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
 Frame = -2

Query  346  LVELDVEFVKGDMGRGYQDLLDVGIDPLEDGEVEQLGALVIEVGHQL  206
            L + DVE  + D G G  +L++ G+D  E GEVEQ G    EVG  L
Sbjct  230  LADTDVEVEEVDAGGGGCELVEDGLDAGEVGEVEQRG----EVGEGL  272


>gi|3831447|gb|AAC69930.1|  putative extensin [Arabidopsis thaliana]
 gi|20197778|gb|AAM15241.1|  putative extensin [Arabidopsis thaliana]
Length=394

 Score = 32.3 bits (72),  Expect = 0.65
 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 0/46 (0%)
 Frame = +1

Query  220  PRSPEHQAAQPHRPPADRSLRRGDPDNRGPCHLLRIQHRAQPMEPQ  357
            P SP  Q  QP  PP  ++     P  R P H    +H + P  P+
Sbjct  63   PPSPPRQQQQPLTPPRQKAPPTSPPQERSPYHSPPSRHMSPPTPPK  108


>gi|42408193|dbj|BAD09330.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
 gi|42408254|dbj|BAD09410.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length=334

 Score = 31.6 bits (70),  Expect = 1.1
 Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 5/66 (7%)
 Frame = +1

Query  202  RKADAQPRSPEHQAAQPHRPPADRSLRRGDPDNRGPCHLLRIQHRA-----QPMEPQGCG  366
            R+  A P +P   AA P R P   SLR G    R P H      R+     +P +P    
Sbjct  204  RQLLAAPPAPPCVAASPRRRPPHSSLRDGSHQRRRPSHQPSSPRRSFPVSCRPRQPSSTL  263

Query  367  RIALCR  384
            R   CR
Sbjct  264  RRRRCR  269


>gi|115456457|ref|NP_001051829.1|  Os03g0837000 [Oryza sativa (japonica cultivar-group)]
 gi|113550300|dbj|BAF13743.1|  Os03g0837000 [Oryza sativa (japonica cultivar-group)]
Length=445

 Score = 31.2 bits (69),  Expect = 1.4
 Identities = 13/16 (81%), Positives = 14/16 (87%), Gaps = 0/16 (0%)
 Frame = +2

Query  392  NTQPXFQFIVMNRRXT  439
            NTQP FQFIVMNR+ T
Sbjct  49   NTQPRFQFIVMNRKNT  64


>gi|29788817|gb|AAP03363.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length=464

 Score = 31.2 bits (69),  Expect = 1.4
 Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +1

Query  217  QPRSPEHQAAQPHRPPADRSLR-RGDPDNRGPCHLLRIQ  330
            QP  P   +A PHRPP    L   G P  R P H LR Q
Sbjct  251  QPALPSPPSASPHRPPPRLLLGFAGTPSPRRPLHPLRRQ  289


>gi|115485621|ref|NP_001067954.1|  Os11g0507500 [Oryza sativa (japonica cultivar-group)]
 gi|113645176|dbj|BAF28317.1|  Os11g0507500 [Oryza sativa (japonica cultivar-group)]
Length=233

 Score = 30.0 bits (66),  Expect = 3.2
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
 Frame = +1

Query  214  AQPRSPEHQAAQPHRPPADRSLRRGDPDNRGPCHLLRIQHRAQPMEPQGCGR  369
            A  R P  ++ +  RP   R +  GD  N   CH   +  RA P+  +G GR
Sbjct  167  AATRRPRRRSGRSERPRRHRGIEGGDARNVCDCHC--VDCRALPLPVRGEGR  216


>gi|27542759|gb|AAO16692.1|  putative Xa1-like protein [Sorghum bicolor]
Length=1284

 Score = 30.0 bits (66),  Expect = 3.2
 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +2

Query  218  NLDHQSTKLLNLTVLQRIDPYVEEILITAAHVTFYEFN-IELNQW  349
            +L H  +KLL+L  L+ + P   E+ + +    FY    ++LNQW
Sbjct  543  SLPHSFSKLLHLRYLKLLSPDYPEMCLPSTVSKFYHLKFLDLNQW  587


>gi|42407583|dbj|BAD10814.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
 gi|42407920|dbj|BAD09060.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length=191

 Score = 30.0 bits (66),  Expect = 3.2
 Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 0/36 (0%)
 Frame = +1

Query  190  DVAKRKADAQPRSPEHQAAQPHRPPADRSLRRGDPD  297
            DV KR   A    P   AAQ H+   DR  R G PD
Sbjct  58   DVIKRGRAALASGPHRSAAQGHQSTVDRDHRVGRPD  93


>gi|115455189|ref|NP_001051195.1|  Os03g0736600 [Oryza sativa (japonica cultivar-group)]
 gi|113549666|dbj|BAF13109.1|  Os03g0736600 [Oryza sativa (japonica cultivar-group)]
Length=226

 Score = 29.6 bits (65),  Expect = 4.2
 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 9/56 (16%)
 Frame = +1

Query  190  DVAKRKADAQPRSPEHQAAQPH-----RPPADRSLRRGDPDNRGPCHLLRIQHRAQ  342
            D A R  DA    P+H+  +PH     RP ADR LRR     R P H  + Q +A+
Sbjct  148  DRAHRPQDA----PDHRVREPHHRERRRPVADRRLRRLLRPRRVPRHRPQRQGQAR  199


>gi|77553980|gb|ABA96776.1|  transposon protein, putative, unclassified [Oryza sativa (japonica 
cultivar-group)]
Length=1990

 Score = 29.6 bits (65),  Expect = 4.2
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 0/36 (0%)
 Frame = +1

Query  196  AKRKADAQPRSPEHQAAQPHRPPADRSLRRGDPDNR  303
            ++R+A     +  H AA P   P+ R  +RG+PD R
Sbjct  142  SRRRARRAAAAARHSAATPSSTPSTREDQRGEPDAR  177


>gi|31432300|gb|AAP53950.1|  transposon protein, putative, unclassified [Oryza sativa (japonica 
cultivar-group)]
Length=2026

 Score = 29.6 bits (65),  Expect = 4.2
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = +1

Query  196  AKRKADAQPRSPEHQAAQPHRPPADRSLRRGDPDNRGPCHLLRIQHRA-QPMEPQGCGRI  372
            ++R+A     +  H AA P   P+ R  + G+PD R      R   RA + ME     R+
Sbjct  141  SRRRARRAAAAARHSAATPSSTPSTREDQHGEPDARLDIERRRSDRRAPRAMEGASSSRV  200

Query  373  A  375
            +
Sbjct  201  S  201


>gi|55167934|gb|AAV43803.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
Length=300

 Score = 29.3 bits (64),  Expect = 5.5
 Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
 Frame = +1

Query  217  QPRSPEHQAAQPHRPPADRSLRRGDPDNRGPCHLLRIQHRAQPMEPQGCGR---IALC  381
            QP  P+   A  HR    R LR   P  R P H  R   R +P+     GR   + LC
Sbjct  229  QPAGPQPGRAPHHRLRPRRRLRPALPSPRRPPHRQRPHRRRRPLAWHTSGRCVEVPLC  286


>gi|15226430|ref|NP_179692.1|  PEARLI4 [Arabidopsis thaliana]
 gi|4803947|gb|AAD29820.1|  pEARLI 4 protein [Arabidopsis thaliana]
 gi|16648887|gb|AAL24295.1|  pEARLI 4 protein [Arabidopsis thaliana]
 gi|20197697|gb|AAM15210.1|  pEARLI 4 protein [Arabidopsis thaliana]
 gi|23197604|gb|AAN15329.1|  pEARLI 4 protein [Arabidopsis thaliana]
Length=748

 Score = 29.3 bits (64),  Expect = 5.5
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = +1

Query  187  EDVAKRKADAQPRSPEHQAAQP-HRP--PADRSLRRGD  291
            +DV+ R    QP++PEH    P HRP  P  RS  + D
Sbjct  143  DDVSPRPFGTQPKTPEHPLRTPQHRPRTPQHRSAHQED  180


>gi|871782|gb|AAC37472.1|  pEARLI 4 gene product
Length=766

 Score = 29.3 bits (64),  Expect = 5.5
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = +1

Query  187  EDVAKRKADAQPRSPEHQAAQP-HRP--PADRSLRRGD  291
            +DV+ R    QP++PEH    P HRP  P  RS  + D
Sbjct  143  DDVSPRPFGTQPKTPEHPLRTPQHRPRTPQHRSAHQED  180


>gi|38344116|emb|CAE01723.2|  OSJNBb0050O03.13 [Oryza sativa (japonica cultivar-group)]
Length=2030

 Score = 28.9 bits (63),  Expect = 7.2
 Identities = 16/48 (33%), Positives = 21/48 (43%), Gaps = 0/48 (0%)
 Frame = +1

Query  196  AKRKADAQPRSPEHQAAQPHRPPADRSLRRGDPDNRGPCHLLRIQHRA  339
            ++R+A     +  H AA P   P+ R   RG PD R      R   RA
Sbjct  142  SRRRARRAAAAVRHSAATPSSTPSTREDLRGGPDARASIERRRNDRRA  189


>gi|15222149|ref|NP_175372.1|  structural constituent of cell wall [Arabidopsis thaliana]
 gi|5430752|gb|AAD43152.1|AC007504_7  Hypothetical Protein [Arabidopsis thaliana]
Length=847

 Score = 28.9 bits (63),  Expect = 7.2
 Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = +1

Query  220  PRSPEHQAAQPHRPPADRSLRRGDPDNRGPCHLLRIQHRAQPMEPQGCGRIALCRQEEYT  399
            P++PE  + +P +PP   S +  +P+N+      +   + QP +P+   +    + EE  
Sbjct  425  PKTPEQPSPKP-QPPKHESPKPEEPENKHELPKQKESPKPQPSKPEDSPKPEQPKPEESP  483

Query  400  AXXSVHCHEPT  432
                    EPT
Sbjct  484  KPEQPQIPEPT  494


>gi|81051959|gb|ABB55313.1|  hypothetical protein 12.t00024 [Asparagus officinalis]
Length=221

 Score = 28.9 bits (63),  Expect = 7.2
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
 Frame = +1

Query  259  PPADRSLRRGDPDNR----GPCHLLRIQHRAQPMEPQGCGRIALCRQ  387
            PPAD++ R G  ++     GPC  L++  RA+       GR+   RQ
Sbjct  69   PPADQNARGGPTEDNNARGGPCRRLKLSTRARTKLEAMKGRVKKIRQ  115


>gi|77555994|gb|ABA98790.1|  retrotransposon protein, putative, unclassified [Oryza sativa 
(japonica cultivar-group)]
Length=680

 Score = 28.9 bits (63),  Expect = 7.2
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 0/36 (0%)
 Frame = +1

Query  196  AKRKADAQPRSPEHQAAQPHRPPADRSLRRGDPDNR  303
            ++R+A     +  H AA P   P  R   RGDPD R
Sbjct  142  SRRRARRAAAAVRHSAATPSSTPPTREDLRGDPDAR  177


>gi|91214143|ref|YP_538765.1|  RNA polymerase beta' subunit [Glycine max]
 gi|88984789|sp|Q8HVY3|RPOC2_SOYBN  DNA-directed RNA polymerase beta'' chain (PEP) (Plastid-encoded 
RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit)
 gi|83595744|gb|ABC25125.1|  RNA polymerase beta' subunit [Glycine max]
Length=1386

 Score = 28.9 bits (63),  Expect = 7.2
 Identities = 23/83 (27%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
 Frame = +2

Query  191  MSQNGKLMPNLDHQSTKLLNLTVLQRIDPYVEEILITAAHVTFYEFNIE--LNQWSRKDV  364
            +S NGK +  +   S +L+   ++   D   +   I  AH +F E +I+  +  + R D+
Sbjct  815  LSGNGKSIRGISDTSIQLVRTCLVLNWDQDKKFSSIENAHASFVEISIKGLVRYFLRIDL  874

Query  365  EGS--LFVVKRNTQPXFQFIVMN  427
              S   ++ KRN  P  +FI+ N
Sbjct  875  VKSHISYIRKRNNPPGSRFILDN  897


>gi|54290272|dbj|BAD61217.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
 gi|54290846|dbj|BAD61507.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length=141

 Score = 28.9 bits (63),  Expect = 7.2
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 7/59 (11%)
 Frame = +1

Query  217  QPRSPEHQAAQ------PHRPPADRSLRRGDPDNRGPCHLLRIQHRAQPMEPQGCGRIA  375
            +P  P H   Q      P R P DR++ RGD D R P     ++  A+ +   G GR A
Sbjct  67   RPGLPYHSHQQEGWLVVPTRHPTDRAVHRGDTDMRAPLTGRGVRLTARSVH-AGAGRAA  124


>gi|115479817|ref|NP_001063502.1|  Os09g0482300 [Oryza sativa (japonica cultivar-group)]
 gi|50725879|dbj|BAD33408.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|50725882|dbj|BAD33411.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|113631735|dbj|BAF25416.1|  Os09g0482300 [Oryza sativa (japonica cultivar-group)]
Length=192

 Score = 28.9 bits (63),  Expect = 7.2
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 0/34 (0%)
 Frame = +1

Query  196  AKRKADAQPRSPEHQAAQPHRPPADRSLRRGDPD  297
            A+R+  A+  + +H+A   HR    R  RR DPD
Sbjct  112  AERRVRARREAGDHRAGVDHRAAGRRERRRRDPD  145


>gi|51038162|gb|AAT93965.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
 gi|51038202|gb|AAT94005.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length=315

 Score = 28.5 bits (62),  Expect = 9.4
 Identities = 20/59 (33%), Positives = 24/59 (40%), Gaps = 8/59 (13%)
 Frame = +1

Query  211  DAQPRSPEHQAAQ-------PHR-PPADRSLRRGDPDNRGPCHLLRIQHRAQPMEPQGC  363
            DA+   P H +         PHR  P   S  RGD ++RG  H  R   R  P    GC
Sbjct  99   DAEALLPTHSSLLSAAARLVPHRLEPRACSCARGDDEHRGGLHRRRGPRRRPPPPSPGC  157

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 261
Number of extensions: 5
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 440
Length of database: 101054579
Length adjustment: 102
Effective length of query: 338
Effective length of database: 72152981
Effective search space: 3174731164
Effective search space used: 3174731164
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 62 (28.5 bits)