Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168856234-11216-45405161807.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,457,254 sequences; 1,532,736,548 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig9 Length=927
Score E Sequences producing significant alignments: (Bits) Value gi|115450711|ref|NP_001048956.1| Os03g0146100 [Oryza sativa (... 353 5e-97 gi|3004950|gb|AAC09245.1| tonoplast intrinsic protein; ZmTIP1... 349 8e-96 gi|38198150|emb|CAE53881.1| aquaporin [Ricinus communis] 347 5e-95 gi|111379086|gb|ABH09330.1| putative aquaporin [Vitis vinifera] 341 2e-93 gi|21284370|gb|AAB51393.2| tonoplast intrinsic protein bobTIP... 340 4e-93 gi|38678108|dbj|BAD04010.1| tonoplast intrinsic protein [Prunus 337 4e-92 gi|22858917|gb|AAN05780.1| tonoplast intrinsic protein bobTIP... 337 5e-92 gi|9988412|dbj|BAB12722.1| gamma tonoplast intrinsic protein [Py 337 5e-92 gi|8699604|gb|AAF78757.1|AF271660_1 putative aquaporin TIP3 [Vit 335 2e-91 gi|56608597|gb|AAW02943.1| aquaporin [Vitis vinifera] 334 3e-91 gi|111379084|gb|ABH09329.1| putative aquaporin [Vitis vinifera] 333 4e-91 gi|60498695|dbj|BAD90702.1| tonoplast intrinsic protein 1;1 [Mim 333 4e-91 gi|6478150|emb|CAB61841.1| putative gamma tonoplast intrinsic... 333 4e-91 gi|78173121|gb|ABB29477.1| tonoplast intrinsic protein [Panax gi 330 5e-90 gi|4099406|gb|AAD10494.1| gamma-type tonoplast intrinsic protein 330 6e-90 gi|475048|emb|CAA51171.1| tonoplast intrinsic protein gamma (... 329 8e-90 gi|21593151|gb|AAM65100.1| putative aquaporin (tonoplast intr... 329 8e-90 gi|520936|emb|CAA56553.1| gamma-TIP-like protein [Hordeum vulgar 328 2e-89 gi|15228041|ref|NP_181221.1| GAMMA-TIP; water channel [Arabid... 328 2e-89 gi|1514977|dbj|BAA12711.1| VM23 [Raphanus sativus] 327 5e-89 gi|62751085|dbj|BAD95790.1| similar to aquaporin [Solanum lycope 325 2e-88 gi|5081419|gb|AAD39372.1|AF118381_1 tonoplast intrinsic protein 325 2e-88 gi|17940748|gb|AAL49753.1|AF452015_1 aquaporin-like protein [Pet 320 4e-87 gi|32363409|sp|Q9FY14|TIP1_MEDTR Probable aquaporin TIP-type ... 320 5e-87 gi|15231569|ref|NP_189283.1| TIP2 (TONOPLAST INTRINSIC PROTEI... 319 1e-86 gi|1622729|gb|AAB17284.1| tonoplast intrinsic protein 318 1e-86 gi|5139543|emb|CAB45653.1| putative tonoplast intrinsic protein 318 2e-86 gi|82468912|gb|ABB76813.1| tonoplast intrinsic protein [Olea eur 317 3e-86 gi|310578|gb|AAA02947.1| nodulin-26 317 6e-86 gi|11357300|pir||T51819 gamma tonoplast intrinsic protein 2 [... 315 1e-85 gi|16492|emb|CAA38633.1| possible membrane channel protein [Arab 315 2e-85 gi|4138262|emb|CAA69353.1| aquaporin 1 [Nicotiana tabacum] 313 6e-85 gi|47026967|gb|AAT08702.1| mitochondrial tonoplast intrinsic ... 313 8e-85 gi|9082285|gb|AAF82790.1|AF275315_1 water-selective transport... 313 8e-85 gi|23957320|gb|AAN40746.1| tonoplast intrinsic protein [Kandelia 312 1e-84 gi|32363500|sp|P42067|TIP1_MEDSA Probable aquaporin TIP-type ... 312 1e-84 gi|12006843|gb|AAG44946.1|AF290619_1 putative gamma TIP [Nicotia 311 2e-84 gi|453980|emb|CAA82843.1| gamma-TIP-like protein [Trifolium repe 310 4e-84 gi|60498697|dbj|BAD90703.1| tonoplast intrinsic protein 1;2 [Mim 309 9e-84 gi|27527692|emb|CAC85291.1| putative tonoplast intrinsic protein 309 9e-84 gi|116831328|gb|ABK28617.1| unknown [Arabidopsis thaliana] 308 3e-83 gi|15234189|ref|NP_192056.1| GAMMA-TIP3/TIP1;3; water channel... 308 3e-83 gi|2246621|gb|AAB62692.1| salt-stress induced tonoplast intri... 307 4e-83 gi|115442565|ref|NP_001045562.1| Os01g0975900 [Oryza sativa (... 307 4e-83 gi|4884866|gb|AAD31847.1|AF133531_1 water channel protein MipI [ 305 2e-82 gi|1200161|emb|CAA64952.1| tonoplast intrinsic protein [Tulipa g 301 2e-81 gi|13447819|gb|AAK26767.1| tonoplast membrane integral protein Z 301 2e-81 gi|310576|gb|AAA02946.1| nodulin-26 298 2e-80 gi|4539145|emb|CAB39758.1| major intrinsic protein [Picea abies] 293 5e-79 gi|3021538|emb|CAA06335.1| aquaporin-like protein [Picea abies] 280 6e-75 gi|76881735|gb|ABA56492.1| putative tonoplast intrinsic protein 259 8e-69 gi|4884868|gb|AAD31848.1|AF133532_1 water channel protein MipK [ 254 4e-67 gi|8699606|gb|AAF78758.1|AF271661_1 putative aquaporin TIP1 [Vit 253 1e-66 gi|13447821|gb|AAK26768.1| tonoplast membrane integral protein Z 252 1e-66 gi|2058706|gb|AAB53329.1| Rb7 [Lycopersicon esculentum] 252 2e-66 gi|92872158|gb|ABE80925.1| Major intrinsic protein [Medicago tru 251 2e-66 gi|111379088|gb|ABH09331.1| putative aquaporin [Vitis vinifera] 249 8e-66 gi|5911732|emb|CAB55837.1| delta tonoplast intrinsic protein [Sp 249 8e-66 gi|115467914|ref|NP_001057556.1| Os06g0336200 [Oryza sativa (... 248 2e-65 gi|10047074|emb|CAB95746.2| putative aquaporin [Vitis vinifera] 248 3e-65 gi|29650739|gb|AAO86710.1| tonoplast water channel [Zea mays] 248 3e-65 gi|1518057|gb|AAB67881.1| membrane channel protein [Solanum tube 248 3e-65 gi|3264596|gb|AAC24569.1| putative tonoplast aquaporin [Zea m... 248 3e-65 gi|15219403|ref|NP_177462.1| water channel [Arabidopsis thali... 248 3e-65 gi|267135|sp|P24422|TIP2_TOBAC Probable aquaporin TIP-type RB... 247 4e-65 gi|73623473|gb|AAZ78659.1| aquaporin [Phaseolus vulgaris] >gi... 246 9e-65 gi|42541154|gb|AAS19470.1| delta tonoplast intrinsic protein TIP 246 9e-65 gi|126959|sp|P21653|TIP1_TOBAC Probable aquaporin TIP-type RB... 246 9e-65 gi|89257490|gb|ABD64981.1| tonoplast intrinsic protein, putative 246 1e-64 gi|13448043|gb|AAK26848.1| tonoplast membrane integral protein Z 246 1e-64 gi|15220848|ref|NP_173223.1| BETA-TIP (BETA-TONOPLAST INTRINS... 246 1e-64 gi|92872870|gb|ABE81405.1| Major intrinsic protein [Medicago tru 245 2e-64 gi|13447827|gb|AAK26771.1| tonoplast membrane integral protein Z 245 2e-64 gi|115447705|ref|NP_001047632.1| Os02g0658100 [Oryza sativa (... 245 2e-64 gi|42541152|gb|AAS19469.1| delta tonoplast intrinsic protein TIP 245 2e-64 gi|92879460|gb|ABE85548.1| Major intrinsic protein [Medicago tru 244 4e-64 gi|13447823|gb|AAK26769.1| tonoplast membrane integral protein Z 244 4e-64 gi|92872541|gb|ABE81150.1| Major intrinsic protein [Medicago ... 244 5e-64 gi|1212925|emb|CAA65184.1| aquaporin [Helianthus annuus] 244 5e-64 gi|42541150|gb|AAS19468.1| delta tonoplast intrinsic protein TIP 243 6e-64 gi|1212915|emb|CAA65186.1| aquaporin [Helianthus annuus] 243 6e-64 gi|89257520|gb|ABD65010.1| tonoplast intrinsic protein, putative 243 1e-63 gi|1212921|emb|CAA65187.1| aquaporin [Helianthus annuus] 242 1e-63 gi|4099408|gb|AAD10495.1| delta-type tonoplast intrinsic protein 242 1e-63 gi|115482680|ref|NP_001064933.1| Os10g0492600 [Oryza sativa (... 242 1e-63 gi|9623335|gb|AAF90121.1|AF254799_1 tonoplast intrinsic protein 242 2e-63 gi|3249565|gb|AAC39480.1| aquaporin [Vernicia fordii] 242 2e-63 gi|81886|pir||JQ1106 tonoplast intrinsic protein alpha - kidney 242 2e-63 gi|461929|sp|P33560|TIP_ANTMA Probable aquaporin TIP-type (To... 241 2e-63 gi|1794147|dbj|BAA19129.1| unnamed protein product [Daucus carot 241 2e-63 gi|1212923|emb|CAA65185.1| aquaporin [Helianthus annuus] 241 3e-63 gi|115459788|ref|NP_001053494.1| Os04g0550900 [Oryza sativa (... 241 4e-63 gi|21284372|gb|AAB51394.2| tonoplast intrinsic protein bobTIP... 241 4e-63 gi|15238100|ref|NP_199556.1| AtTIP2;3; water channel [Arabido... 241 4e-63 gi|15236043|ref|NP_193465.1| DELTA-TIP2/TIP2;2; water channel... 241 4e-63 gi|12006841|gb|AAG44945.1|AF290618_1 putative delta TIP [Nicotia 240 7e-63 gi|1109612|dbj|BAA08107.1| MP23 precursor [Cucurbita cv. Kurokaw 240 7e-63 gi|135859|sp|P23958|TIPA_PHAVU Probable aquaporin TIP-type al... 239 9e-63 gi|60498699|dbj|BAD90704.1| tonoplast intrinsic protein 2;1 [Mim 239 1e-62 gi|17473872|gb|AAL38357.1| delta tonoplast intrinsic protein ... 239 1e-62
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 11, 2007 5:57 PM Number of letters in database: 101,016,998 Number of sequences in database: 283,237 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283237 Number of Hits to DB: 448 Number of extensions: 4 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 927 Length of database: 101016998 Length adjustment: 113 Effective length of query: 814 Effective length of database: 69011217 Effective search space: 13526198532 Effective search space used: 13526198532 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 67 (30.4 bits)