Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168922139-6092-89899349497.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig8 Length=627
Score E Sequences producing significant alignments: (Bits) Value gi|116311126|emb|CAH68052.1| B0103C08-B0602B01.9 [Oryza sativa ( 375 5e-104 gi|7649312|gb|AAF65846.1|AF255796_1 aquaporin 2 [Allium cepa] 375 9e-104 gi|115459882|ref|NP_001053541.1| Os04g0559700 [Oryza sativa (... 373 3e-103 gi|50345961|gb|AAT74898.1| plasma membrane intrinsic protein PIP 370 2e-102 gi|4768911|gb|AAD29676.1|AF131201_1 plasma membrane MIP protein 370 2e-102 gi|1632822|emb|CAA70156.1| transmembrane protein [Oryza sativ... 370 2e-102 gi|29650725|gb|AAO86706.1| plasma membrane intrinsic protein [Ze 369 7e-102 gi|13447793|gb|AAK26754.1| plasma membrane integral protein Z... 368 9e-102 gi|6692753|dbj|BAA23746.2| HvPIP1;5 [Hordeum vulgare subsp. vulg 368 9e-102 gi|17940740|gb|AAL49749.1|AF452011_1 aquaporin-like protein [Pet 367 2e-101 gi|2696804|dbj|BAA24016.1| water channel protein [Oryza sativa ( 367 2e-101 gi|22762044|dbj|BAC11804.1| plasma membrane intrinsic protein [L 367 2e-101 gi|115447785|ref|NP_001047672.1| Os02g0666200 [Oryza sativa (... 367 2e-101 gi|77992951|gb|ABB13429.1| plasma membrane intrinsic protein [Ol 367 2e-101 gi|111379070|gb|ABH09322.1| putative aquaporin [Vitis vinifera] 365 7e-101 gi|8071622|gb|AAF71817.1| putative aquaporin PIP1-1 [Vitis berla 365 7e-101 gi|121309843|dbj|BAF44223.1| aquaporin [Iris x hollandica] 364 1e-100 gi|8071624|gb|AAF71818.1|AF141898_1 putative aquaporin PIP1-2 [V 364 2e-100 gi|73913019|gb|AAZ91447.1| PIP1 aquaporin [Xerophyta humilis] 363 3e-100 gi|15236485|ref|NP_194071.1| PIP1;5/PIP1D; water channel [Ara... 363 3e-100 gi|119371436|dbj|BAF41978.1| aquaporin [Hordeum vulgare] 363 4e-100 gi|8886718|gb|AAF80556.1|AF188843_1 plasma membrane aquaporin [V 360 2e-99 gi|53748457|emb|CAH59432.1| aquaporin 2 [Plantago major] 359 5e-99 gi|111379072|gb|ABH09323.1| putative aquaporin [Vitis vinifera] 358 7e-99 gi|17017255|gb|AAL33585.1|AF440271_1 aquaporin [Nicotiana tabacu 358 9e-99 gi|4388774|emb|CAA54233.1| transmembrane protein [Hordeum vulgar 358 1e-98 gi|111379076|gb|ABH09325.1| putative aquaporin [Vitis vinifera] 357 2e-98 gi|57336888|emb|CAH60719.1| putative plasma membrane intrinsi... 357 2e-98 gi|2114050|dbj|BAA20076.1| water channel protein [Nicotiana exce 357 3e-98 gi|116295134|gb|ABJ98540.1| PIP1 protein [Stipa breviflora] 356 3e-98 gi|21593526|gb|AAM65493.1| water channel-like protein [Arabidops 356 4e-98 gi|2114048|dbj|BAA20075.1| water channel protein [Nicotiana exce 355 6e-98 gi|586102|sp|Q08451|PIP1_LYCES Probable aquaporin PIP-type pT... 355 7e-98 gi|13235338|emb|CAC33802.1| plasma membrane intrinsic protein... 355 7e-98 gi|18411332|ref|NP_567178.1| TMP-C; water channel [Arabidopsi... 355 1e-97 gi|2199574|gb|AAB61378.1| aquaporin [Brassica rapa] 354 1e-97 gi|2440042|emb|CAA04652.1| major intrinsic protein PIPa2 [Crater 353 2e-97 gi|2114046|dbj|BAA20074.1| water channel protein [Nicotiana exce 353 3e-97 gi|7209556|dbj|BAA92258.1| plasma membrane aquaporin 1b [Raphanu 353 3e-97 gi|89212808|gb|ABD63904.1| aquaporin 1 [Gossypium hirsutum] 353 4e-97 gi|2440044|emb|CAA04653.1| major intrinsic protein PIPB [Cratero 352 5e-97 gi|38198152|emb|CAE53882.1| aquaporin [Ricinus communis] 352 5e-97 gi|1199503|emb|CAA64896.1| transmembrane channel protein [Bra... 352 6e-97 gi|5912586|emb|CAB56217.1| PM28B protein [Spinacia oleracea] 351 1e-96 gi|8071626|gb|AAF71819.1|AF141899_1 putative aquaporin PIP1-3 [V 351 1e-96 gi|116292722|gb|ABJ97677.1| major intrinsic protein [Solanum tub 350 2e-96 gi|115291793|gb|ABI93215.1| water channel protein [Nicotiana tab 350 2e-96 gi|17940738|gb|AAL49748.1|AF452010_1 channel-like protein [Petun 350 2e-96 gi|8886720|gb|AAF80557.1|AF188844_1 plasma membrane aquaporin [V 350 2e-96 gi|10799093|gb|AAG23179.1|AF299050_1 aquaporin PIP1b1 [Brassica 350 3e-96 gi|115449847|ref|NP_001048566.1| Os02g0823100 [Oryza sativa (... 350 3e-96 gi|3551131|dbj|BAA32777.1| plasma membrane aquaporin (PAQ1) [Rap 350 3e-96 gi|472873|emb|CAA53475.1| plasma membrane intrinsic protein 1a [ 349 4e-96 gi|83283969|gb|ABC01892.1| major intrinsic protein 1-like protei 349 4e-96 gi|15225913|ref|NP_182120.1| PIP1B; water channel [Arabidopsi... 349 4e-96 gi|15233109|ref|NP_191702.1| PIP1A; water channel [Arabidopsi... 349 4e-96 gi|111379074|gb|ABH09324.1| putative aquaporin [Vitis vinifera] 349 5e-96 gi|1199804|emb|CAA64895.1| transmembrane channel protein [Brassi 349 5e-96 gi|118132686|gb|ABK60194.1| PIP1 protein [Gossypium hirsutum] 348 7e-96 gi|60498683|dbj|BAD90696.1| plasma membrane intrinsic protein 1; 348 7e-96 gi|10799095|gb|AAG23180.1|AF299051_1 aquaporin PIP1b2 [Brassica 348 7e-96 gi|116295124|gb|ABJ98535.1| PIP1 protein [Stipa baicalensis] ... 348 9e-96 gi|2385378|emb|CAA04750.1| aquaporin 1 [Nicotiana tabacum] >g... 348 9e-96 gi|116295130|gb|ABJ98538.1| PIP1 protein [Stipa tianschanica var 348 1e-95 gi|115334273|dbj|BAF33067.1| aquaporin [Hordeum vulgare] 348 1e-95 gi|110277322|gb|ABG57184.1| aquaporin [Tamarix sp. ZDY-001908] 348 1e-95 gi|559684|gb|AAA93521.1| aquaporin 348 1e-95 gi|56131020|gb|AAV80228.1| aquaporin 1 [Aegiceras corniculatum] 347 2e-95 gi|7263070|gb|AAF44085.1| putative water channel protein [Lycope 347 2e-95 gi|17065068|gb|AAL32688.1| plasma membrane intrinsic protein ... 347 2e-95 gi|77999265|gb|ABB16979.1| major intrinsic protein 1-like protei 347 2e-95 gi|15223438|ref|NP_171668.1| PIP1C; water channel [Arabidopsi... 347 2e-95 gi|7441247|pir||T01528 probable plasma membrane intrinsic pro... 347 2e-95 gi|4467357|emb|CAB37860.1| PIP1b protein [Arabidopsis thaliana] 347 2e-95 gi|3158474|gb|AAC17528.1| aquaporin 1 [Samanea saman] 347 2e-95 gi|21594059|gb|AAM65975.1| plasma membrane intrinsic protein 1a 347 2e-95 gi|116295136|gb|ABJ98541.1| PIP1 protein [Stipa tianschanica var 347 3e-95 gi|14538013|gb|AAK66766.1|AF386739_1 aquaporin protein PIP1;1 [M 347 3e-95 gi|54873534|gb|AAV41024.1| plasma membrane intrinsic protein [Gl 346 3e-95 gi|50402524|gb|AAT76618.1| aquaporin [Vicia faba] 346 3e-95 gi|868154|gb|AAB09757.1| similar to mipB gene product in Mese... 346 3e-95 gi|82623377|gb|ABB87103.1| water channel protein-like [Solanum t 346 3e-95 gi|19880505|gb|AAM00368.1|AF366564_1 aquaporin PIP1 [Triticum ae 346 3e-95 gi|13447799|gb|AAK26757.1| plasma membrane integral protein ZmPI 346 5e-95 gi|472875|emb|CAA53476.1| plasma membrane intrinsic protein 1c [ 345 6e-95 gi|2623060|gb|AAB86380.1| aquaporin-like transmembrane channel p 345 6e-95 gi|62945923|gb|AAY22204.1| putative aquaporin [Phaseolus vulgari 345 6e-95 gi|62642086|gb|AAX92682.1| probable aquaporin [Picea abies] 345 6e-95 gi|2373401|dbj|BAA22097.1| transmembrane protein [Arabidopsis th 345 8e-95 gi|115334275|dbj|BAF33068.1| aquaporin [Hordeum vulgare] 345 1e-94 gi|21536709|gb|AAM61041.1| aquaporin (plasma membrane intrins... 345 1e-94 gi|57336886|emb|CAH60718.1| putative plasma membrane intrinsi... 344 1e-94 gi|6691629|dbj|BAA23745.2| HvPIP1;3 [Hordeum vulgare subsp. vulg 344 1e-94 gi|575731|emb|CAA57955.1| transmembrane protein [Zea mays] 343 3e-94 gi|401189|sp|P25794|PIP2_PEA Probable aquaporin PIP-type 7a (... 342 5e-94 gi|85690845|gb|AAS55867.2| aquaporin-like protein [Ipomoea nil] 342 7e-94 gi|20683|emb|CAA38241.1| unnamed protein product [Pisum sativum] 340 2e-93 gi|2570509|gb|AAB82140.1| transmembrane protein [Oryza sativa] 340 2e-93 gi|27527694|emb|CAC85292.1| putative plasma membrane intrinsic p 339 6e-93 gi|42572785|ref|NP_974489.1| TMP-C [Arabidopsis thaliana] 339 6e-93
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 401 Number of extensions: 10 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 627 Length of database: 101054579 Length adjustment: 108 Effective length of query: 519 Effective length of database: 70452887 Effective search space: 7115741587 Effective search space used: 7115741587 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 65 (29.6 bits)