Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168926429-30485-181794151395.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig18 Length=567
Score E Sequences producing significant alignments: (Bits) Value gi|15281594|gb|AAK94326.1| histone-like protein [Fritillaria lil 97.1 4e-20 gi|15281584|gb|AAK94321.1| histone-like protein [Fritillaria lil 97.1 4e-20 gi|15281598|gb|AAK94328.1| histone-like protein [Fritillaria lil 97.1 4e-20 gi|15281588|gb|AAK94323.1| histone-like protein [Fritillaria lil 97.1 4e-20 gi|15281578|gb|AAK94318.1| histone-like protein [Fritillaria ... 97.1 4e-20 gi|2641211|gb|AAB86857.1| histone-like protein [Fritillaria agre 97.1 4e-20 gi|115455945|ref|NP_001051573.1| Os03g0799000 [Oryza sativa (... 95.5 1e-19 gi|121950|sp|P23444|H1_MAIZE Histone H1 >gi|22321|emb|CAA40362.1 95.1 1e-19 gi|6474950|dbj|BAA87331.1| variant of histone H1 [Lilium longifl 93.6 4e-19 gi|5230785|gb|AAD41007.1|AF107024_1 histone H1 WH1B.1 [Triticum 93.2 6e-19 gi|15281580|gb|AAK94319.1| histone-like protein [Fritillaria lil 92.0 1e-18 gi|15281596|gb|AAK94327.1| histone-like protein [Fritillaria ... 88.2 2e-17 gi|15281606|gb|AAK94332.1| histone-like protein [Fritillaria lil 88.2 2e-17 gi|15281592|gb|AAK94325.1| histone-like protein [Fritillaria ... 88.2 2e-17 gi|15281604|gb|AAK94331.1| histone-like protein [Fritillaria lil 88.2 2e-17 gi|15281586|gb|AAK94322.1| histone-like protein [Fritillaria lil 88.2 2e-17 gi|90704789|dbj|BAE92289.1| putative histone H1 [Cryptomeria jap 87.4 3e-17 gi|5230788|gb|AAD41008.1|AF107026_1 histone H1 WH1A.3 [Triticum 86.7 5e-17 gi|15281590|gb|AAK94324.1| histone-like protein [Fritillaria lil 86.3 7e-17 gi|5230783|gb|AAD41006.1|AF107023_1 histone H1 WH1A.2 [Triticum 85.9 9e-17 gi|5230781|gb|AAD41005.1|AF107022_1 histone H1 WH1A.1 [Triticum 85.9 9e-17 gi|14916992|sp|P27806|H1_WHEAT Histone H1 85.9 9e-17 gi|11558848|emb|CAA42529.2| histone H1 [Triticum aestivum] 85.9 9e-17 gi|2980893|dbj|BAA25204.1| histone H1 [Triticum aestivum] 85.9 9e-17 gi|15281608|gb|AAK94333.1| histone-like protein [Fritillaria lil 85.1 2e-16 gi|5230790|gb|AAD41009.1|AF107027_1 histone H1 WH1A.4 [Triticum 84.0 3e-16 gi|73587458|emb|CAJ27511.1| histone H1 subtype 7 [Pisum sativum] 84.0 3e-16 gi|2980891|dbj|BAA25203.1| histone H1 [Triticum aestivum] 83.6 4e-16 gi|62286644|sp|Q9M5W4|H1_EUPES Histone H1 >gi|6752901|gb|AAF2... 83.2 6e-16 gi|556345|gb|AAA50303.1| histone H1 82.8 8e-16 gi|37951219|dbj|BAD00018.1| histone 1 [Malus x domestica] 82.0 1e-15 gi|3021487|emb|CAA12232.1| histone H1 [Solanum lycopersicum] 81.6 2e-15 gi|81176340|gb|ABB59463.1| histone H1F [Nicotiana tabacum] >g... 81.6 2e-15 gi|73587462|emb|CAJ27513.1| histone H1 subtype 7 [Pisum sativum] 81.6 2e-15 gi|73587460|emb|CAJ27512.1| histone H1 subtype 7 [Pisum sativum] 81.6 2e-15 gi|115470923|ref|NP_001059060.1| Os07g0184800 [Oryza sativa (... 80.1 5e-15 gi|585241|sp|P37218|H1_LYCES Histone H1 >gi|424100|gb|AAA50578.1 80.1 5e-15 gi|22135471|gb|AAM93216.1|AF527615_1 histone H1-like protein HON 79.7 6e-15 gi|30024108|emb|CAC84682.1| putative histone H1 [Pinus pinaster] 79.3 8e-15 gi|106879565|emb|CAJ38366.1| histone H1 [Plantago major] 79.0 1e-14 gi|790929|gb|AAC41651.1| histone H1 78.6 1e-14 gi|6681423|dbj|BAA88671.1| histone H1 [Nicotiana tabacum] 78.6 1e-14 gi|3204127|emb|CAA07233.1| histone H1 [Cicer arietinum] 78.2 2e-14 gi|115457440|ref|NP_001052320.1| Os04g0253000 [Oryza sativa (... 77.4 3e-14 gi|32489126|emb|CAE04793.1| OSJNBb0018J12.6 [Oryza sativa (ja... 77.4 3e-14 gi|21465095|gb|AAM54671.1|AF514417_1 histone H1 [Pisum sativu... 77.4 3e-14 gi|13540391|gb|AAK29449.1|AF352246_1 histone H1 [Pisum sativum] 77.4 3e-14 gi|13540393|gb|AAK29450.1|AF352247_1 histone H1 [Pisum sativum] 77.4 3e-14 gi|4106696|dbj|BAA36284.1| ribosome-sedimenting protein [Pisum s 77.4 3e-14 gi|4996567|dbj|BAA78535.1| ribosome-sedimenting protein [Pisum s 77.4 3e-14 gi|825521|emb|CAA77867.1| H1 histone-like protein [Solanum lycop 77.4 3e-14 gi|23506611|gb|AAN37904.1| histone H1D [Nicotiana tabacum] 77.0 4e-14 gi|2623960|emb|CAA73171.1| histone H1 [Apium graveolens] 77.0 4e-14 gi|27529850|dbj|BAC53940.1| stress-inducible H1 histone-like pro 77.0 4e-14 gi|13540397|gb|AAK29452.1|AF352249_1 histone H1 [Lathyrus sativu 76.6 5e-14 gi|21465093|gb|AAM54670.1|AF514416_1 histone H1 [Lathyrus aphaca 76.6 5e-14 gi|13540399|gb|AAK29453.1|AF352250_1 histone H1 [Lathyrus sativu 76.6 5e-14 gi|18463959|gb|AAL73043.1|AF461814_1 histone H1-like protein [Ze 76.6 5e-14 gi|5726575|gb|AAD48472.1|AF170089_1 histone H1C [Nicotiana tabac 76.3 7e-14 gi|7595978|gb|AAF64525.1|AF253416_1 histone H1 variant [Lycopers 76.3 7e-14 gi|729668|sp|P40267|H1_LYCPN Histone H1 >gi|436823|gb|AAB0307... 76.3 7e-14 gi|32966575|gb|AAP92164.1| histone H1 [Medicago truncatula] 75.5 1e-13 gi|30420972|gb|AAP31306.1| histone H1 [Vicia hirsuta] 75.5 1e-13 gi|13540395|gb|AAK29451.1|AF352248_1 histone H1 [Pisum sativum] 75.5 1e-13 gi|16314|emb|CAA44312.1| histone H1-1 [Arabidopsis thaliana] 75.5 1e-13 gi|15222199|ref|NP_172161.1| DNA binding [Arabidopsis thalian... 75.5 1e-13 gi|15224536|ref|NP_180620.1| DNA binding [Arabidopsis thalian... 75.1 2e-13 gi|46237496|emb|CAG25587.1| histone H1 [Pisum sativum] 74.3 3e-13 gi|29469895|gb|AAO74588.1| histone H1 subtype 5 [Pisum sativum] 74.3 3e-13 gi|28301619|emb|CAD65876.1| histone H1 [Pisum sativum] 74.3 3e-13 gi|46237494|emb|CAG25586.1| histone H1 [Pisum sativum] 73.9 4e-13 gi|14594811|emb|CAC43291.1| putative linker histone H1 variant p 73.9 4e-13 gi|30420974|gb|AAP31307.1| histone H1 [Lens nigricans] 73.2 6e-13 gi|13540405|gb|AAK29456.1|AF352253_1 histone H1 [Lens culinaris] 73.2 6e-13 gi|13540403|gb|AAK29455.1|AF352252_1 histone H1 [Lens culinaris] 73.2 6e-13 gi|13540401|gb|AAK29454.1|AF352251_1 histone H1 [Lens culinaris] 73.2 6e-13 gi|121953|sp|P08283|H1_PEA Histone H1 (PsH1b) (PsH1b-40) >gi|... 72.8 8e-13 gi|15227957|ref|NP_179396.1| HIS1-3 (HISTONE H1-3); DNA bindi... 72.4 1e-12 gi|30420970|gb|AAP31305.1| histone H1 [Vicia faba] 72.0 1e-12 gi|47027093|gb|AAT08760.1| histone H1 [Hyacinthus orientalis] 71.6 2e-12 gi|585238|sp|Q08864|H11_VOLCA Histone H1-I >gi|349585|gb|AAA7472 60.8 3e-09 gi|30680194|ref|NP_849970.1| HIS1-3 (HISTONE H1-3); DNA binding 60.5 4e-09 gi|115466186|ref|NP_001056692.1| Os06g0130800 [Oryza sativa (... 58.9 1e-08 gi|585239|sp|Q08865|H12_VOLCA Histone H1-II >gi|349587|gb|AAA342 58.5 2e-08 gi|555655|gb|AAA50196.1| DNA-binding protein 57.8 3e-08 gi|92870991|gb|ABE80152.1| hypothetical protein MtrDRAFT_AC13... 56.6 6e-08 gi|414525|gb|AAA21525.1| meiotin-1 56.2 8e-08 gi|537916|gb|AAB59301.1| meiotin-1 56.2 8e-08 gi|571480|gb|AAA98452.1| histone H1 56.2 8e-08 gi|15706274|emb|CAC69997.1| HMG I/Y like protein [Glycine max] 51.2 2e-06 gi|92872731|gb|ABE81296.1| Linker histone, N-terminal; Homeod... 50.8 3e-06 gi|4218141|emb|CAA15421.1| HMR1 protein [Antirrhinum majus] 48.9 1e-05 gi|110931702|gb|ABH02850.1| MYB transcription factor MYB107 [Gly 47.4 4e-05 gi|115476508|ref|NP_001061850.1| Os08g0428800 [Oryza sativa (... 47.0 5e-05 gi|25553691|dbj|BAC24935.1| putative high mobility group I/Y ... 47.0 5e-05 gi|454279|gb|AAA32718.1| DNA-binding protein 46.6 6e-05 gi|1661162|gb|AAB18405.1| water stress inducible protein [Oryza 45.8 1e-04 gi|4585621|emb|CAB40849.1| HMGI/Y protein [Zea mays] 45.8 1e-04 gi|47027043|gb|AAT08736.1| high mobility group I/Y-2 [Hyacinthus 44.7 2e-04 gi|110931744|gb|ABH02871.1| MYB transcription factor MYB91 [Glyc 44.3 3e-04
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 173 Number of extensions: 0 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 567 Length of database: 101054579 Length adjustment: 107 Effective length of query: 460 Effective length of database: 70736236 Effective search space: 5800371352 Effective search space used: 5800371352 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)