Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168923514-6732-68431106952.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig2 Length=459
Score E Sequences producing significant alignments: (Bits) Value gi|48527431|gb|AAT45847.1| elongation factor 1-alpha 1 [Elaeis g 281 9e-76 gi|61741088|gb|AAX54511.1| elongation factor 1 alpha [Actinidia 281 9e-76 gi|74486740|gb|ABA12223.1| translation elongation factor 1A-7 [G 281 9e-76 gi|74486728|gb|ABA12217.1| translation elongation factor 1A-1 [G 281 9e-76 gi|74486736|gb|ABA12221.1| translation elongation factor 1A-5 [G 281 9e-76 gi|74486742|gb|ABA12224.1| translation elongation factor 1A-8 [G 281 9e-76 gi|74486734|gb|ABA12220.1| translation elongation factor 1A-4 [G 281 9e-76 gi|74486744|gb|ABA12225.1| translation elongation factor 1A-9 [G 281 9e-76 gi|74486732|gb|ABA12219.1| translation elongation factor 1A-3 [G 281 9e-76 gi|3869088|dbj|BAA34348.1| elongation factor-1 alpha [Nicotiana 281 9e-76 gi|6015058|sp|O49169|EF1A_MANES Elongation factor 1-alpha (EF... 281 9e-76 gi|5917747|gb|AAD56020.1|AF181492_1 elongation factor-1 alpha 3 280 1e-75 gi|5917745|gb|AAD56019.1|AF181491_1 elongation factor-1 alpha 2 280 1e-75 gi|24371055|dbj|BAC22125.1| eukaryotic elongation factor 1A [Bru 280 1e-75 gi|74486738|gb|ABA12222.1| translation elongation factor 1A-6 [G 280 2e-75 gi|4680249|gb|AAD27590.1|AF121261_1 elongation factor 1-alpha 1; 280 2e-75 gi|108706480|gb|ABF94275.1| Elongation factor 1-alpha, putati... 279 3e-75 gi|2996096|gb|AAC15413.1| translation elongation factor-1 alp... 279 3e-75 gi|2282584|gb|AAB64207.1| elongation factor 1-alpha [Zea mays] 279 3e-75 gi|74486730|gb|ABA12218.1| translation elongation factor 1A-2 [G 279 3e-75 gi|115451089|ref|NP_001049145.1| Os03g0177400 [Oryza sativa (... 279 3e-75 gi|3122071|sp|Q41803|EF1A_MAIZE Elongation factor 1-alpha (EF... 279 3e-75 gi|399414|sp|Q03033|EF1A_WHEAT Elongation factor 1-alpha (EF-... 279 3e-75 gi|3122060|sp|O24534|EF1A_VICFA Elongation factor 1-alpha (EF... 279 3e-75 gi|2662343|dbj|BAA23658.1| EF-1 alpha [Oryza sativa] 279 3e-75 gi|66775524|gb|AAY56337.1| elongation factor-1 alpha [Musa acumi 279 3e-75 gi|23397097|gb|AAN31833.1| putative translation elongation fa... 279 3e-75 gi|18086389|gb|AAL57653.1| At1g07930/T6D22_3 [Arabidopsis thalia 279 3e-75 gi|17064954|gb|AAL32631.1| putative elongation factor 1-a [Ar... 279 3e-75 gi|8778823|gb|AAF79822.1|AC026875_2 T6D22.2 [Arabidopsis thalian 279 3e-75 gi|79331520|ref|NP_001032107.1| calmodulin binding / translat... 279 3e-75 gi|1864017|dbj|BAA09709.1| elongation factor-1 alpha [Nicotiana 279 3e-75 gi|1169476|sp|P43643|EF1A_TOBAC Elongation factor 1-alpha (EF... 279 3e-75 gi|15239308|ref|NP_200847.1| calmodulin binding / translation... 279 3e-75 gi|40217939|gb|AAR82894.1| elongation factor 1-alpha [Cichorium 278 4e-75 gi|4138179|emb|CAA11705.1| elongation factor 1 alpha subunit [Ma 278 4e-75 gi|18419676|gb|AAL69396.1| elongation factor 1-alpha [Elaeis ole 278 4e-75 gi|9802384|gb|AAF99703.1| elongation factor [Saccharum officinar 278 4e-75 gi|7230391|gb|AAF42979.1| elongation factor 1 alpha [Zea mays] 278 4e-75 gi|26324158|gb|AAN77897.1| elongation factor 1 alpha [Stevia reb 278 4e-75 gi|7230395|gb|AAF42981.1| elongation factor 1 alpha [Zea mays] 278 4e-75 gi|7230387|gb|AAF42977.1| elongation factor 1 alpha [Zea mays] 278 4e-75 gi|7230385|gb|AAF42976.1| elongation factor 1 alpha [Zea mays] 278 4e-75 gi|83283977|gb|ABC01896.1| elongation factor 1-alpha-like protei 278 4e-75 gi|82621190|gb|ABB86283.1| elongation factor-1 alpha-like [Solan 278 4e-75 gi|82400148|gb|ABB72813.1| elongation factor 1-alpha-like protei 278 4e-75 gi|81076159|gb|ABB55388.1| elongation factor 1-alpha-like [Solan 278 4e-75 gi|77999261|gb|ABB16977.1| elongation factor 1-alpha-like protei 278 4e-75 gi|119150|sp|P17786|EF1A_LYCES Elongation factor 1-alpha (EF-... 278 4e-75 gi|461987|sp|P34823|EF1A2_DAUCA Elongation factor 1-alpha (EF... 278 4e-75 gi|24745945|dbj|BAC23049.1| Elongation factor 1-alpha [Solanum t 278 4e-75 gi|295789|emb|CAA34456.1| elongation factor 1-alpha [Arabidopsis 278 8e-75 gi|13605682|gb|AAK32834.1|AF361822_1 At1g07930/T6D22_3 [Arabi... 278 8e-75 gi|1352345|sp|P25698|EF1A_SOYBN Elongation factor 1-alpha (EF... 278 8e-75 gi|89276321|gb|ABD66517.1| EF-1 alpha [Gymnadenia conopsea] 277 1e-74 gi|13430510|gb|AAK25877.1|AF360167_1 putative translation elo... 277 1e-74 gi|7230397|gb|AAF42982.1| elongation factor 1 alpha [Zea mays] 277 1e-74 gi|232029|sp|P29521|EF1A1_DAUCA Elongation factor 1-alpha (EF... 277 1e-74 gi|29243204|dbj|BAC66180.1| elongation factor 1A [Avicennia mari 276 2e-74 gi|110741201|dbj|BAF02151.1| elongation factor 1-alpha [Arabidop 276 2e-74 gi|24371059|dbj|BAC22127.1| eukaryotic elongation factor 1A [Sal 275 4e-74 gi|18873725|gb|AAL79774.1|AF331849_1 elongation factor 1 alpha [ 275 6e-74 gi|108706481|gb|ABF94276.1| Elongation factor 1-alpha, putati... 274 8e-74 gi|24371057|dbj|BAC22126.1| eukaryotic elongation factor 1A [Sua 274 8e-74 gi|7230393|gb|AAF42980.1| elongation factor 1 alpha [Zea mays] 273 2e-73 gi|15081765|gb|AAK82537.1| At1g07930/T6D22_3 [Arabidopsis thalia 273 2e-73 gi|6015054|sp|Q40034|EF1A2_HORVU Elongation factor 1-alpha (E... 273 2e-73 gi|461988|sp|P34824|EF1A1_HORVU Elongation factor 1-alpha (EF-1- 271 5e-73 gi|18873727|gb|AAL79775.1| elongation factor 1 alpha [Saccharum 269 3e-72 gi|12580861|emb|CAC27139.1| translation elongation factor-1 alph 268 5e-72 gi|3122053|sp|Q41011|EF1A_PEA Elongation factor 1-alpha (EF-1... 263 3e-70 gi|33347397|gb|AAQ15281.1| elongation factor 1 alpha [Pyrus pyri 262 3e-70 gi|33347395|gb|AAQ15280.1| elongation factor 1 alpha [Pyrus pyri 262 4e-70 gi|1673426|emb|CAA68246.1| factor 1-alpha [Forsythia x intermedi 262 4e-70 gi|1669668|emb|CAA65798.1| EF1-alpha [Forsythia x intermedia] 262 4e-70 gi|40748293|gb|AAR89627.1| elongation factor 1 alpha [Citrus sin 260 1e-69 gi|85717894|gb|ABC74971.1| elongation factor 1 alpha [Malus x do 260 2e-69 gi|56112439|gb|AAV71174.1| elongation factor 1-alpha [Lotus corn 259 4e-69 gi|7230389|gb|AAF42978.1| elongation factor 1 alpha [Zea mays] 258 5e-69 gi|77999299|gb|ABB16996.1| elongation factor 1-alpha-like protei 257 1e-68 gi|90823336|gb|ABE01138.1| elongation factor 1-alpha [Daucus car 250 2e-66 gi|62362578|gb|AAX81595.1| elongation factor elF1-alpha [Populus 248 7e-66 gi|29892963|emb|CAD60652.1| elongation factor [Solanum tuberosum 245 4e-65 gi|4586588|dbj|BAA76426.1| translation elongation factor [Cicer 245 4e-65 gi|4731316|gb|AAD28440.1| elongation factor 1-alpha [Nicotiana t 236 3e-62 gi|27414140|gb|AAO12048.1| elongation factor 1-alpha [Poncirus t 228 7e-60 gi|7542600|gb|AAF63516.1|AF242732_1 translation elongation facto 207 2e-53 gi|77745446|gb|ABB02622.1| elongation factor 1-alpha-like protei 186 3e-47 gi|77999257|gb|ABB16975.1| elongation factor 1-alpha-like protei 185 5e-47 gi|119721291|gb|ABL98118.1| elongation factor 1-alpha [Euphorbia 176 4e-44 gi|29419231|gb|AAO61852.1| translation elongation factor-1 alpha 175 5e-44 gi|115345316|dbj|BAF33334.1| elongation factor 1 alpha [Capsicum 164 9e-41 gi|92873453|gb|ABE81895.1| Protein synthesis factor, GTP-binding 156 3e-38 gi|37783255|gb|AAP04393.1| translation elongation factor 1 alpha 154 2e-37 gi|92895648|gb|ABE92795.1| Zinc finger, RanBP2-type; AAA ATPa... 149 4e-36 gi|116061178|emb|CAL56566.1| Mitochondrial translation elonga... 147 2e-35 gi|54399516|gb|AAV34148.1| EF-1 alpha-like protein [Helicospo... 146 3e-35 gi|116061031|emb|CAL56419.1| Mitochondrial translation elonga... 145 6e-35 gi|74272649|gb|ABA01120.1| elongation factor alpha-like protein 144 1e-34 gi|29539324|dbj|BAC67663.1| elongation factor-1alpha [Pleodorina 144 2e-34
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 268 Number of extensions: 4 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 459 Length of database: 101054579 Length adjustment: 103 Effective length of query: 356 Effective length of database: 71869632 Effective search space: 3593481600 Effective search space used: 3593481600 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 62 (28.5 bits)