Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168926714-11530-147676392794.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig24 Length=511
Score E Sequences producing significant alignments: (Bits) Value gi|115463745|ref|NP_001055472.1| Os05g0398100 [Oryza sativa (... 279 3e-75 gi|30687245|ref|NP_850852.1| protein binding [Arabidopsis thalia 263 3e-70 gi|15239713|ref|NP_197434.1| protein binding [Arabidopsis thalia 263 3e-70 gi|18491179|gb|AAL69492.1| unknown protein [Arabidopsis thaliana 199 3e-51 gi|30684235|ref|NP_196810.2| protein binding [Arabidopsis thalia 199 3e-51 gi|9955550|emb|CAC05434.1| putative protein [Arabidopsis thalian 190 2e-48 gi|116055510|emb|CAL58178.1| Neural adherens junction protein... 163 4e-40 gi|115483458|ref|NP_001065399.1| Os10g0563200 [Oryza sativa (... 62.0 1e-09 gi|12597882|gb|AAG60190.1|AC084763_10 putative arm repeat protei 62.0 1e-09 gi|78709013|gb|ABB47988.1| armadillo/beta-catenin repeat fami... 62.0 1e-09 gi|18406656|ref|NP_566029.1| ubiquitin-protein ligase [Arabid... 61.2 2e-09 gi|79527508|ref|NP_199049.2| ubiquitin-protein ligase [Arabidops 60.1 4e-09 gi|51969312|dbj|BAD43348.1| arm repeat containing protein [Arabi 60.1 4e-09 gi|9759470|dbj|BAB10475.1| arm repeat containing protein [Arabid 60.1 4e-09 gi|15232303|ref|NP_191594.1| ubiquitin-protein ligase [Arabid... 58.9 9e-09 gi|115470068|ref|NP_001058633.1| Os06g0726900 [Oryza sativa (... 55.1 1e-07 gi|55296755|dbj|BAD67947.1| putative cell death-related prote... 55.1 1e-07 gi|115465872|ref|NP_001056535.1| Os06g0102700 [Oryza sativa (... 55.1 1e-07 gi|54291136|dbj|BAD61809.1| putative cell death-related prote... 55.1 1e-07 gi|15235456|ref|NP_193007.1| unknown protein [Arabidopsis tha... 53.5 4e-07 gi|115452221|ref|NP_001049711.1| Os03g0275900 [Oryza sativa (... 49.3 7e-06 gi|2949588|emb|CAA75514.1| Importin alpha-like protein [Arabidop 49.3 7e-06 gi|2154717|emb|CAA70703.1| Kap alpha protein [Arabidopsis thalia 49.3 7e-06 gi|14334730|gb|AAK59543.1| unknown protein [Arabidopsis thaliana 49.3 7e-06 gi|28974687|gb|AAO61490.1| arm repeat-containing protein [Nicoti 49.3 7e-06 gi|1101777|gb|AAC49169.1| PF16 >gi|1587371|prf||2206442A PF16 ge 49.3 7e-06 gi|15235257|ref|NP_192124.1| ATIMPALPHA3/MOS6; protein transp... 49.3 7e-06 gi|115472767|ref|NP_001059982.1| Os07g0560300 [Oryza sativa (... 48.9 1e-05 gi|115473079|ref|NP_001060138.1| Os07g0587500 [Oryza sativa (... 48.5 1e-05 gi|2642448|gb|AAB87116.1| hypothetical protein [Arabidopsis t... 48.1 2e-05 gi|18401867|ref|NP_565676.1| ubiquitin-protein ligase [Arabid... 48.1 2e-05 gi|30681980|ref|NP_179895.2| ubiquitin-protein ligase [Arabidops 48.1 2e-05 gi|115489180|ref|NP_001067077.1| Os12g0570000 [Oryza sativa (... 47.4 3e-05 gi|115441475|ref|NP_001045017.1| Os01g0884400 [Oryza sativa (... 47.4 3e-05 gi|108862859|gb|ABG22055.1| Spotted leaf protein 11, putative... 47.4 3e-05 gi|56784489|dbj|BAD82582.1| putative arm repeat-containing pr... 47.4 3e-05 gi|42568835|ref|NP_201535.3| ubiquitin-protein ligase [Arabid... 47.4 3e-05 gi|79559926|ref|NP_179803.4| unknown protein [Arabidopsis thalia 47.4 3e-05 gi|77556856|gb|ABA99652.1| Spotted leaf protein 11, putative,... 47.4 3e-05 gi|60390884|sp|Q64HA9|SPL11_ORYSA Spotted leaf protein 11 (Sp... 47.4 3e-05 gi|115476934|ref|NP_001062063.1| Os08g0481200 [Oryza sativa (... 47.4 3e-05 gi|25412087|pir||C84609 hypothetical protein At2g22130 [impor... 47.4 3e-05 gi|9758433|dbj|BAB09019.1| unnamed protein product [Arabidopsis 47.4 3e-05 gi|110738844|dbj|BAF01345.1| hypothetical proteins [Arabidopsis 47.0 4e-05 gi|92899052|gb|ABE94518.1| C2 [Medicago truncatula] 46.6 5e-05 gi|91807014|gb|ABE66234.1| importin alpha-1 subunit [Arabidopsis 46.6 5e-05 gi|62321187|dbj|BAD94341.1| hypothetical protein [Arabidopsis th 46.2 6e-05 gi|27311825|gb|AAO00878.1| unknown protein [Arabidopsis thaliana 46.2 6e-05 gi|2462822|gb|AAB72157.1| hypothetical protein [Arabidopsis thal 46.2 6e-05 gi|15219996|ref|NP_173716.1| ubiquitin-protein ligase [Arabidops 46.2 6e-05 gi|60892761|gb|AAX37286.1| low temperature induced-protein PL... 45.8 8e-05 gi|4678308|emb|CAB41099.1| putative protein [Arabidopsis thalian 45.8 8e-05 gi|15237730|ref|NP_200676.1| unknown protein [Arabidopsis tha... 45.8 8e-05 gi|15241420|ref|NP_196955.1| unknown protein [Arabidopsis tha... 45.8 8e-05 gi|8843789|dbj|BAA97337.1| phosphoinositide-specific phosphol... 45.8 8e-05 gi|26452835|dbj|BAC43497.1| unknown protein [Arabidopsis thalian 45.8 8e-05 gi|22331792|ref|NP_191045.2| ubiquitin-protein ligase [Arabid... 45.8 8e-05 gi|2950210|emb|CAA74965.1| Importin alpha-like protein [Arabidop 45.4 1e-04 gi|13605661|gb|AAK32824.1|AF361811_1 AT3g06720/F3E22_14 [Arab... 45.4 1e-04 gi|18414597|ref|NP_567485.1| protein transporter [Arabidopsis th 45.4 1e-04 gi|115473045|ref|NP_001060121.1| Os07g0584900 [Oryza sativa (... 45.1 1e-04 gi|15217828|ref|NP_171769.1| protein transporter [Arabidopsis... 44.7 2e-04 gi|15231445|ref|NP_190235.1| ubiquitin-protein ligase [Arabid... 44.7 2e-04 gi|21592960|gb|AAM64910.1| unknown [Arabidopsis thaliana] 44.3 2e-04 gi|16226454|gb|AAL16172.1|AF428404_1 AT3g01400/T13O15_4 [Arab... 44.3 2e-04 gi|18395805|ref|NP_566136.1| unknown protein [Arabidopsis tha... 44.3 2e-04 gi|92892811|gb|ABE91410.1| Zinc finger, RING-type; U box [Medica 43.9 3e-04 gi|13699777|gb|AAB72116.2| AtKAP alpha [Arabidopsis thaliana] 43.9 3e-04 gi|4191744|gb|AAD09923.1| importin alpha homolog [Arabidopsis th 43.9 3e-04 gi|115474447|ref|NP_001060820.1| Os08g0110500 [Oryza sativa (... 43.9 3e-04 gi|15230778|ref|NP_187328.1| AT-IMP; protein transporter [Ara... 43.9 3e-04 gi|26452478|dbj|BAC43324.1| unknown protein [Arabidopsis thalian 43.9 3e-04 gi|81075707|gb|ABB55384.1| importin alpha 1-like [Solanum tubero 43.5 4e-04 gi|15239850|ref|NP_199742.1| protein transporter [Arabidopsis... 43.5 4e-04 gi|116059796|emb|CAL55503.1| Karyopherin (importin) alpha (ISS) 43.1 5e-04 gi|115453673|ref|NP_001050437.1| Os03g0435300 [Oryza sativa (... 43.1 5e-04 gi|7258383|emb|CAB77599.1| putative protein [Arabidopsis thalian 43.1 5e-04 gi|13752560|gb|AAK38726.1|AF369706_1 importin alpha 1 [Capsicum 43.1 5e-04 gi|15809794|gb|AAL06825.1| AT3g06720/F3E22_14 [Arabidopsis thali 43.1 5e-04 gi|77554290|gb|ABA97086.1| armadillo/beta-catenin repeat fami... 43.1 5e-04 gi|30694120|ref|NP_191039.2| ubiquitin-protein ligase [Arabidops 43.1 5e-04 gi|26452249|dbj|BAC43212.1| unknown protein [Arabidopsis thalian 43.1 5e-04 gi|92886249|gb|ABE88245.1| IMP dehydrogenase/GMP reductase [Medi 42.7 7e-04 gi|15228263|ref|NP_190366.1| ubiquitin-protein ligase [Arabid... 42.7 7e-04 gi|2959324|emb|CAA75513.1| Importin alpha-like protein [Arabidop 42.7 7e-04 gi|20259439|gb|AAM14040.1| unknown protein [Arabidopsis thaliana 42.7 7e-04 gi|42571305|ref|NP_973743.1| protein transporter [Arabidopsis th 42.4 0.001 gi|6682927|dbj|BAA88950.1| importin alpha 1b [Oryza sativa (japo 42.4 0.001 gi|28192986|emb|CAD20348.1| ARC1 protein [Brassica oleracea] 42.4 0.001 gi|115462185|ref|NP_001054692.1| Os05g0155500 [Oryza sativa (... 42.4 0.001 gi|14194157|gb|AAK56273.1|AF367284_1 At1g09270/T12M4_2 [Arabidop 42.0 0.001 gi|13752562|gb|AAK38727.1|AF369707_1 importin alpha 2 [Capsicum 42.0 0.001 gi|2959322|emb|CAA74966.1| Importin alpha-like protein [Arabidop 42.0 0.001 gi|33337497|gb|AAQ13406.1|AF005265_1 importin [Oryza sativa] 42.0 0.001 gi|79317456|ref|NP_001031011.1| protein transporter [Arabidopsis 42.0 0.001 gi|15217478|ref|NP_172398.1| protein transporter [Arabidopsis... 42.0 0.001 gi|115435706|ref|NP_001042611.1| Os01g0253300 [Oryza sativa (... 42.0 0.001 gi|119866037|gb|ABM05488.1| Impa2 [Nicotiana benthamiana] 41.2 0.002 gi|92879246|gb|ABE85431.1| Armadillo [Medicago truncatula] 41.2 0.002 gi|115434112|ref|NP_001041814.1| Os01g0112500 [Oryza sativa (... 41.2 0.002
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 337 Number of extensions: 6 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 511 Length of database: 101054579 Length adjustment: 105 Effective length of query: 406 Effective length of database: 71302934 Effective search space: 4634690710 Effective search space used: 4634690710 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 63 (28.9 bits)