Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168926728-12306-92193505040.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig25 Length=494
Score E Sequences producing significant alignments: (Bits) Value gi|22530976|gb|AAM96992.1| putative protein [Arabidopsis thal... 155 7e-38 gi|30695446|ref|NP_850923.1| unknown protein [Arabidopsis tha... 155 7e-38 gi|8777369|dbj|BAA96959.1| unnamed protein product [Arabidopsis 155 7e-38 gi|47497800|dbj|BAD19898.1| putative ABI3-interacting protein... 154 2e-37 gi|115478144|ref|NP_001062667.1| Os09g0248200 [Oryza sativa (... 154 2e-37 gi|115478146|ref|NP_001062668.1| Os09g0248300 [Oryza sativa (... 149 4e-36 gi|82623433|gb|ABB87131.1| hypothetical protein [Solanum tuberos 149 4e-36 gi|82621112|gb|ABB86244.1| unknown [Solanum tuberosum] 148 8e-36 gi|117607071|gb|ABK42079.1| hypothetical protein [Capsicum annuu 140 3e-33 gi|115473127|ref|NP_001060162.1| Os07g0592300 [Oryza sativa (... 75.5 9e-14 gi|118199995|gb|ABK79073.1| truncated FRIGIDA-LIKE1 [Arabidopsis 48.9 9e-06 gi|15237325|ref|NP_197136.1| FRL1 (FRIGIDA LIKE 1) [Arabidops... 48.9 9e-06 gi|118199997|gb|ABK79074.1| FRIGIDA-LIKE 2 [Arabidopsis thaliana 48.1 2e-05 gi|15222466|ref|NP_174463.1| FRL2 (FRIGIDA LIKE 2) [Arabidops... 48.1 2e-05 gi|93007384|gb|ABE97195.1| unknown [Arabidopsis thaliana] 45.4 1e-04 gi|15240464|ref|NP_198075.1| unknown protein [Arabidopsis tha... 45.4 1e-04 gi|92872932|gb|ABE81461.1| ABI3-interacting protein 2 [Medicago 41.2 0.002 gi|116830509|gb|ABK28212.1| unknown [Arabidopsis thaliana] 40.8 0.002 gi|15230428|ref|NP_187826.1| unknown protein [Arabidopsis tha... 40.8 0.002 gi|18414336|ref|NP_567447.1| unknown protein [Arabidopsis tha... 40.0 0.004 gi|2244847|emb|CAB10269.1| hydroxyproline-rich glycoprotein h... 40.0 0.004 gi|115470809|ref|NP_001059003.1| Os07g0173200 [Oryza sativa (... 38.1 0.016 gi|34394454|dbj|BAC83628.1| putative hydroxyproline-rich glyc... 38.1 0.016 gi|34394453|dbj|BAC83627.1| putative hydroxyproline-rich glyc... 38.1 0.016 gi|6554201|gb|AAF16647.1|AC011661_25 T23J18.9 [Arabidopsis thali 37.4 0.027 gi|15220379|ref|NP_172609.1| RNA binding [Arabidopsis thaliana] 37.4 0.027 gi|16974572|gb|AAL31182.1| AT4g14900/dl3490c [Arabidopsis thalia 37.0 0.036 gi|18403383|ref|NP_566709.1| unknown protein [Arabidopsis tha... 36.6 0.046 gi|3831486|sp|Q39295|AGL15_BRANA Agamous-like MADS box protei... 35.8 0.079 gi|108705832|gb|ABF93627.1| kinesin motor protein, putative, ... 35.4 0.10 gi|6735334|emb|CAB68160.1| putative protein [Arabidopsis thalian 35.4 0.10 gi|15451070|gb|AAK96806.1| Unknown protein [Arabidopsis thali... 35.4 0.10 gi|27476088|gb|AAO17019.1| Hypothetical protein [Oryza sativa (j 35.4 0.10 gi|15240463|ref|NP_198074.1| unknown protein [Arabidopsis tha... 35.4 0.10 gi|22328978|ref|NP_680744.1| unknown protein [Arabidopsis thalia 35.4 0.10 gi|89574426|gb|ABD77425.1| agamous-like 15 [Brassica napus] 35.0 0.14 gi|18400804|ref|NP_565591.1| unknown protein [Arabidopsis tha... 35.0 0.14 gi|18402909|ref|NP_565741.1| unknown protein [Arabidopsis tha... 35.0 0.14 gi|15982767|gb|AAL09731.1| At2g32240/F22D22.1 [Arabidopsis th... 35.0 0.14 gi|25412304|pir||D84647 hypothetical protein At2g25350 [impor... 35.0 0.14 gi|116056290|emb|CAL56673.1| Myosin class II heavy chain (ISS) [ 34.7 0.18 gi|25408221|pir||F84730 probable myosin heavy chain [imported] - 34.7 0.18 gi|115453955|ref|NP_001050578.1| Os03g0588600 [Oryza sativa (... 34.3 0.23 gi|42568499|ref|NP_200114.2| unknown protein [Arabidopsis thalia 33.9 0.30 gi|8809591|dbj|BAA97142.1| unnamed protein product [Arabidopsis 33.9 0.30 gi|42565618|ref|NP_190176.2| unknown protein [Arabidopsis tha... 33.5 0.39 gi|7339491|emb|CAB82814.1| putative protein [Arabidopsis thalian 33.5 0.39 gi|89257621|gb|ABD65109.1| Myosin II heavy chain-like domain ... 33.5 0.39 gi|92896841|gb|ABE93369.1| IMP dehydrogenase/GMP reductase [Medi 33.1 0.51 gi|108709212|gb|ABF97007.1| retrotransposon protein, putative... 32.0 1.1 gi|15235996|ref|NP_194885.1| unknown protein [Arabidopsis tha... 32.0 1.1 gi|29244667|gb|AAO73260.1| unknown protein [Oryza sativa (japoni 32.0 1.1 gi|115462417|ref|NP_001054808.1| Os05g0180400 [Oryza sativa (... 31.6 1.5 gi|110739535|dbj|BAF01676.1| hypothetical protein [Arabidopsis t 31.6 1.5 gi|16604601|gb|AAL24093.1| unknown protein [Arabidopsis thaliana 31.6 1.5 gi|57900683|gb|AAW57808.1| putative MAR binding protein [Oryz... 31.6 1.5 gi|42567325|ref|NP_567888.2| unknown protein [Arabidopsis thalia 31.6 1.5 gi|15222723|ref|NP_173976.1| RNA binding [Arabidopsis thalian... 31.6 1.5 gi|2827621|emb|CAA16573.1| putative protein [Arabidopsis thal... 31.6 1.5 gi|50300536|gb|AAT73677.1| hypothetical protein [Oryza sativa (j 31.2 2.0 gi|115446227|ref|NP_001046893.1| Os02g0497500 [Oryza sativa (... 31.2 2.0 gi|15228210|ref|NP_190350.1| Ran GTPase binding / chromatin b... 31.2 2.0 gi|77554150|gb|ABA96946.1| hypothetical protein LOC_Os12g1516... 31.2 2.0 gi|73587476|emb|CAJ27520.1| beclin 1 protein [Gossypium raimondi 31.2 2.0 gi|15230998|ref|NP_191386.1| unknown protein [Arabidopsis tha... 31.2 2.0 gi|116000517|emb|CAL50197.1| Myosin class II heavy chain (ISS) [ 30.8 2.5 gi|4204261|gb|AAD10642.1| Hypothetical protein [Arabidopsis thal 30.8 2.5 gi|18405416|ref|NP_564695.1| unknown protein [Arabidopsis thalia 30.8 2.5 gi|55296258|dbj|BAD68038.1| hypothetical protein [Oryza sativ... 30.8 2.5 gi|62733414|gb|AAX95531.1| Expressed protein [Oryza sativa (j... 30.4 3.3 gi|21593427|gb|AAM65394.1| unknown [Arabidopsis thaliana] 30.4 3.3 gi|18425155|ref|NP_569045.1| phospholipase C [Arabidopsis tha... 30.4 3.3 gi|116060285|emb|CAL55621.1| Myosin class II heavy chain (ISS) [ 30.0 4.3 gi|116057503|emb|CAL51930.1| unnamed protein product [Ostreococc 30.0 4.3 gi|32488247|emb|CAE03067.1| OSJNBa0089E12.5 [Oryza sativa (japon 30.0 4.3 gi|5733429|gb|AAD49574.1| methionine S-methyltransferase [Arabid 30.0 4.3 gi|115448605|ref|NP_001048082.1| Os02g0741500 [Oryza sativa (... 30.0 4.3 gi|25311687|pir||D86218 protein F22O13.4 [imported] - Arabido... 30.0 4.3 gi|7212796|dbj|BAA92372.1| St-RNase [Malus transitoria] 30.0 4.3 gi|38346187|emb|CAE02034.2| OSJNBa0027O01.3 [Oryza sativa (japon 30.0 4.3 gi|15223261|ref|NP_172332.1| SYP111; t-SNARE [Arabidopsis tha... 30.0 4.3 gi|15230277|ref|NP_191291.1| unknown protein [Arabidopsis tha... 30.0 4.3 gi|116309878|emb|CAH66915.1| OSIGBa0126B18.8 [Oryza sativa (indi 29.6 5.7 gi|116058701|emb|CAL54408.1| unnamed protein product [Ostreococc 29.6 5.7 gi|92896371|gb|ABE93171.1| Kinesin, motor region; Prefoldin [Med 29.6 5.7 gi|20303594|gb|AAM19021.1|AC084748_11 putative copper/zinc su... 29.6 5.7 gi|15230522|ref|NP_190724.1| ATP binding / transmembrane rece... 29.6 5.7 gi|2982465|emb|CAA18229.1| putative protein [Arabidopsis thal... 29.6 5.7 gi|9828634|gb|AAG00257.1|AC002130_22 F1N21.5 [Arabidopsis thalia 29.6 5.7 gi|77555045|gb|ABA97841.1| hypothetical protein LOC_Os12g2208... 29.6 5.7 gi|15223260|ref|NP_172331.1| NPQ1 (NON-PHOTOCHEMICAL QUENCHIN... 29.6 5.7 gi|15238391|ref|NP_200747.1| unknown protein [Arabidopsis tha... 29.6 5.7 gi|116059314|emb|CAL55021.1| Kinesin (KAR3 subfamily) (ISS) [Ost 29.3 7.4 gi|110739750|dbj|BAF01782.1| methionine S-methyltransferase [Ara 29.3 7.4 gi|108862853|gb|ABA99600.2| retrotransposon protein, putative... 29.3 7.4 gi|115451205|ref|NP_001049203.1| Os03g0186600 [Oryza sativa (... 29.3 7.4 gi|92876112|gb|ABE83845.1| Integrase, catalytic region; Asp/G... 29.3 7.4 gi|91207152|sp|Q5K4R0|MAD47_ORYSA MADS-box transcription fact... 29.3 7.4 gi|89257645|gb|ABD65132.1| Myosin II heavy chain-like domain ... 29.3 7.4 gi|79442300|ref|NP_190807.3| deoxyribonuclease [Arabidopsis t... 29.3 7.4
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 289 Number of extensions: 4 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 494 Length of database: 101054579 Length adjustment: 104 Effective length of query: 390 Effective length of database: 71586283 Effective search space: 4295176980 Effective search space used: 4295176980 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 63 (28.9 bits)