Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168926899-15496-173803581125.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig26 Length=533
Score E Sequences producing significant alignments: (Bits) Value gi|115466592|ref|NP_001056895.1| Os06g0163300 [Oryza sativa (... 123 3e-28 gi|55296085|dbj|BAD67647.1| unknown protein [Oryza sativa (japon 122 1e-27 gi|115435440|ref|NP_001042478.1| Os01g0228500 [Oryza sativa (... 92.4 8e-19 gi|92896487|gb|ABE93217.1| Harpin-induced 1 [Medicago truncatula 89.4 7e-18 gi|42571783|ref|NP_973982.1| unknown protein [Arabidopsis thalia 86.3 6e-17 gi|18401556|ref|NP_564495.1| unknown protein [Arabidopsis tha... 86.3 6e-17 gi|116311987|emb|CAJ86345.1| H0814G11.12 [Oryza sativa (indica c 70.9 3e-12 gi|115461492|ref|NP_001054346.1| Os04g0689500 [Oryza sativa (... 70.9 3e-12 gi|5777621|emb|CAB53482.1| CAA30379.1 protein [Oryza sativa] 70.9 3e-12 gi|38345517|emb|CAE01801.2| OSJNBa0039K24.20 [Oryza sativa (japo 70.5 3e-12 gi|28416677|gb|AAO42869.1| At5g42860 [Arabidopsis thaliana] 70.1 4e-12 gi|15239097|ref|NP_199100.1| unknown protein [Arabidopsis tha... 70.1 4e-12 gi|15230135|ref|NP_189103.1| unknown protein [Arabidopsis thalia 55.1 1e-07 gi|9294056|dbj|BAB02013.1| unnamed protein product [Arabidopsis 55.1 1e-07 gi|115458438|ref|NP_001052819.1| Os04g0430600 [Oryza sativa (... 53.1 6e-07 gi|32488073|emb|CAE03026.1| OSJNBa0084A10.1 [Oryza sativa (japon 53.1 6e-07 gi|116309975|emb|CAH67003.1| OSIGBa0160I14.1 [Oryza sativa (indi 52.8 7e-07 gi|15227481|ref|NP_181730.1| unknown protein [Arabidopsis tha... 49.3 8e-06 gi|9294055|dbj|BAB02012.1| unnamed protein product [Arabidopsis 38.9 0.011 gi|115447805|ref|NP_001047682.1| Os02g0667600 [Oryza sativa (... 37.7 0.024 gi|1070000|emb|CAA62261.1| biotin carboxyl carrier protein [B... 32.3 1.0 gi|116060616|emb|CAL55952.1| Predicted small molecule transporte 31.6 1.8 gi|20279462|gb|AAM18742.1|AC092548_20 hypothetical protein [Oryz 31.6 1.8 gi|115478474|ref|NP_001062832.1| Os09g0309300 [Oryza sativa (... 30.4 3.9 gi|115451567|ref|NP_001049384.1| Os03g0216500 [Oryza sativa (... 30.4 3.9 gi|55733905|gb|AAV59412.1| unknown protein [Oryza sativa (jap... 30.4 3.9 gi|115480087|ref|NP_001063637.1| Os09g0511500 [Oryza sativa (... 30.0 5.1 gi|115462003|ref|NP_001054601.1| Os05g0141000 [Oryza sativa (... 30.0 5.1 gi|115446655|ref|NP_001047107.1| Os02g0552600 [Oryza sativa (... 29.6 6.7 gi|115444109|ref|NP_001045834.1| Os02g0138000 [Oryza sativa (... 29.6 6.7 gi|21213868|emb|CAD12767.2| LHY protein [Phaseolus vulgaris] 29.3 8.7 gi|55297151|dbj|BAD68808.1| hypothetical protein [Oryza sativ... 29.3 8.7 gi|40253872|dbj|BAD05807.1| hypothetical protein [Oryza sativa ( 29.3 8.7 gi|42407859|dbj|BAD09001.1| putative AT hook-containing MAR b... 25.0 8.9
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 337 Number of extensions: 2 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 533 Length of database: 101054579 Length adjustment: 106 Effective length of query: 427 Effective length of database: 71019585 Effective search space: 5042390535 Effective search space used: 5042390535 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)