Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168926958-17728-99973817563.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig29 Length=558
Score E Sequences producing significant alignments: (Bits) Value gi|115439795|ref|NP_001044177.1| Os01g0736900 [Oryza sativa (... 214 2e-55 gi|115465005|ref|NP_001056102.1| Os05g0526400 [Oryza sativa (... 211 2e-54 gi|85070182|gb|ABC69764.1| unknown [Vitis pseudoreticulata] 208 9e-54 gi|83284001|gb|ABC01908.1| putative 24 kDa seed maturation pr... 204 2e-52 gi|13027362|dbj|BAB32723.1| unknown protein [Oryza sativa (ja... 195 1e-49 gi|15222616|ref|NP_176592.1| unknown protein [Arabidopsis tha... 192 9e-49 gi|42566117|ref|NP_191715.2| unknown protein [Arabidopsis tha... 188 1e-47 gi|18406991|ref|NP_566065.1| unknown protein [Arabidopsis tha... 186 4e-47 gi|15236556|ref|NP_194094.1| unknown protein [Arabidopsis tha... 184 2e-46 gi|15237093|ref|NP_192861.1| unknown protein [Arabidopsis tha... 181 1e-45 gi|15238125|ref|NP_198975.1| unknown protein [Arabidopsis tha... 181 2e-45 gi|79316001|ref|NP_001030913.1| unknown protein [Arabidopsis ... 160 2e-39 gi|92874883|gb|ABE83072.1| Reticulon [Medicago truncatula] 152 6e-37 gi|115445443|ref|NP_001046501.1| Os02g0265900 [Oryza sativa (... 147 2e-35 gi|115468228|ref|NP_001057713.1| Os06g0503400 [Oryza sativa (... 146 4e-35 gi|115455721|ref|NP_001051461.1| Os03g0781700 [Oryza sativa (... 137 2e-32 gi|78714222|gb|ABB51093.1| reticulon [Hordeum vulgare] 131 1e-30 gi|115463129|ref|NP_001055164.1| Os05g0312500 [Oryza sativa (... 128 1e-29 gi|115435410|ref|NP_001042463.1| Os01g0226300 [Oryza sativa (... 124 2e-28 gi|18398810|ref|NP_566371.1| unknown protein [Arabidopsis tha... 123 5e-28 gi|30681227|ref|NP_850552.1| unknown protein [Arabidopsis thalia 123 5e-28 gi|115470537|ref|NP_001058867.1| Os07g0142000 [Oryza sativa (... 117 2e-26 gi|115434434|ref|NP_001041975.1| Os01g0139000 [Oryza sativa (... 102 7e-22 gi|15234108|ref|NP_192032.1| unknown protein [Arabidopsis tha... 99.8 6e-21 gi|62865747|gb|AAY17066.1| m-160-3_1 [Polytrichum juniperinum] 97.4 3e-20 gi|15232423|ref|NP_190980.1| unknown protein [Arabidopsis tha... 94.7 2e-19 gi|21592845|gb|AAM64795.1| unknown [Arabidopsis thaliana] 89.0 1e-17 gi|18401821|ref|NP_566604.1| unknown protein [Arabidopsis tha... 89.0 1e-17 gi|56784501|dbj|BAD82652.1| 24 kDa seed maturation protein-li... 79.7 6e-15 gi|115461218|ref|NP_001054209.1| Os04g0670000 [Oryza sativa (... 79.0 1e-14 gi|90399161|emb|CAJ86090.1| H0818H01.12 [Oryza sativa (indica cu 79.0 1e-14 gi|18402246|ref|NP_566635.1| unknown protein [Arabidopsis tha... 75.1 2e-13 gi|115452885|ref|NP_001050043.1| Os03g0336600 [Oryza sativa (... 73.9 3e-13 gi|79607888|ref|NP_974276.2| unknown protein [Arabidopsis thalia 73.6 5e-13 gi|79596815|ref|NP_850557.2| unknown protein [Arabidopsis thalia 73.6 5e-13 gi|42572359|ref|NP_974275.1| unknown protein [Arabidopsis tha... 73.6 5e-13 gi|21593206|gb|AAM65155.1| unknown [Arabidopsis thaliana] 73.2 6e-13 gi|30679374|ref|NP_179130.2| unknown protein [Arabidopsis tha... 69.3 9e-12 gi|42570787|ref|NP_973467.1| unknown protein [Arabidopsis thalia 69.3 9e-12 gi|4102690|gb|AAD01540.1| 24 kDa seed maturation protein [Glycin 64.7 2e-10 gi|115457912|ref|NP_001052556.1| Os04g0367400 [Oryza sativa (... 63.2 6e-10 gi|116309603|emb|CAH66659.1| OSIGBa0092J07.5 [Oryza sativa (indi 59.7 7e-09 gi|38344513|emb|CAD40638.2| OSJNBa0016N04.6 [Oryza sativa (japon 59.7 7e-09 gi|4662633|gb|AAD26905.1| hypothetical protein [Arabidopsis thal 58.5 2e-08 gi|15221333|ref|NP_176990.1| unknown protein [Arabidopsis tha... 55.5 1e-07 gi|110743729|dbj|BAE99701.1| hypothetical protein [Arabidopsis t 50.1 5e-06 gi|56784958|dbj|BAD82488.1| 24 kDa seed maturation protein-li... 49.3 9e-06 gi|18400337|ref|NP_565555.1| unknown protein [Arabidopsis tha... 48.9 1e-05 gi|2191131|gb|AAB61018.1| A_IG002N01.8 gene product [Arabidopsis 40.4 0.004 gi|18027687|gb|AAL55822.1|AF314251_1 dehydrin-like protein [Zea 38.5 0.016 gi|21539467|gb|AAM53286.1| 3-beta-hydroxysteroid dehydrogenase [ 33.5 0.52 gi|42569340|ref|NP_180194.2| 3-beta-hydroxy-delta5-steroid de... 33.5 0.52 gi|79323109|ref|NP_001031422.1| 3-beta-hydroxy-delta5-steroid... 33.5 0.52 gi|115480157|ref|NP_001063672.1| Os09g0516500 [Oryza sativa (... 32.7 0.89 gi|47232558|dbj|BAD18982.1| bHLH transcription activator Ivory s 32.7 0.89 gi|115446579|ref|NP_001047069.1| Os02g0542500 [Oryza sativa (... 32.3 1.2 gi|18406234|ref|NP_565998.1| 3-beta-hydroxy-delta5-steroid de... 31.6 2.0 gi|27542756|gb|AAO16689.1| hypothetical protein-like protein [So 30.8 3.4 gi|115453453|ref|NP_001050327.1| Os03g0405000 [Oryza sativa (... 30.0 5.8 gi|115434166|ref|NP_001041841.1| Os01g0116100 [Oryza sativa (... 29.6 7.5 gi|115453515|ref|NP_001050358.1| Os03g0413000 [Oryza sativa (... 29.6 7.5 gi|37542669|gb|AAL47206.1| HAP3-like transcriptional-activato... 29.6 7.5 gi|2865523|gb|AAC02689.1| cold regulated LTCOR18 [Lavatera thuri 29.6 7.5 gi|53791303|dbj|BAD52568.1| hypothetical protein [Oryza sativ... 29.6 7.5 gi|53139488|emb|CAH58741.1| vascular specific protein 4 [Plan... 29.6 7.5 gi|115442575|ref|NP_001045567.1| Os01g0976500 [Oryza sativa (... 29.3 9.8 gi|18071354|gb|AAL58213.1|AC090882_16 putative transposon pro... 29.3 9.8 gi|30060389|dbj|BAC75850.1| hypothetical protein [Oryza sativa ( 29.3 9.8
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 292 Number of extensions: 5 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 558 Length of database: 101054579 Length adjustment: 106 Effective length of query: 452 Effective length of database: 71019585 Effective search space: 5681566800 Effective search space used: 5681566800 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)