Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168927566-22071-142800088326.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig41 Length=319
Score E Sequences producing significant alignments: (Bits) Value gi|115458184|ref|NP_001052692.1| Os04g0402100 [Oryza sativa (... 172 3e-43 gi|92879647|gb|ABE85666.1| Calreticulin/calnexin [Medicago trunc 169 3e-42 gi|11131766|sp|Q39994|CALX_HELTU Calnexin homolog precursor >... 167 1e-41 gi|56744207|dbj|BAD81043.1| calnexin [Glycine max] 166 3e-41 gi|3334138|sp|Q39817|CALX_SOYBN Calnexin homolog precursor >gi|6 166 3e-41 gi|92871101|gb|ABE80216.1| Concanavalin A-like lectin/glucanase 164 7e-41 gi|67077850|dbj|BAD99512.1| calnexin-like protein [Solanum lycop 164 1e-40 gi|15240353|ref|NP_200987.1| calcium ion binding [Arabidopsis... 161 7e-40 gi|11131469|sp|O82709|CALX_PEA Calnexin homolog precursor >gi... 159 4e-39 gi|31321896|gb|AAK84429.1| putative papillar cell-specific calne 158 6e-39 gi|473878|gb|AAA17742.1| calnexin homolog 151 7e-37 gi|15240773|ref|NP_196351.1| calcium ion binding [Arabidopsis... 151 7e-37 gi|56606827|gb|AAW02798.1| calreticulin-like protein [Triticum a 56.2 3e-08 gi|1181331|emb|CAA54678.1| calnexin [Zea mays] 55.1 7e-08 gi|439588|gb|AAA32949.1| calreticulin 55.1 7e-08 gi|439586|gb|AAA32948.1| calreticulin 55.1 7e-08 gi|34393219|dbj|BAC82933.1| putative Calreticulin precursor [... 53.9 2e-07 gi|115471369|ref|NP_001059283.1| Os07g0246200 [Oryza sativa (... 53.9 2e-07 gi|6682833|dbj|BAA88900.1| calcium-binding protein [Oryza sativa 53.9 2e-07 gi|115456397|ref|NP_001051799.1| Os03g0832200 [Oryza sativa (... 51.2 1e-06 gi|15217459|ref|NP_172392.1| calcium ion binding [Arabidopsis... 51.2 1e-06 gi|21555174|gb|AAM63796.1| putative calcium-binding protein, ... 51.2 1e-06 gi|2052381|gb|AAC49696.1| calreticulin 51.2 1e-06 gi|1009712|gb|AAA80652.1| calreticulin 51.2 1e-06 gi|25295763|pir||H86224 hypothetical protein [imported] - Ara... 51.2 1e-06 gi|12643243|sp|Q38858|CALR2_ARATH Calreticulin-2 precursor 51.2 1e-06 gi|577612|emb|CAA86728.1| calcium-binding protein [Zea mays] ... 50.8 1e-06 gi|115456083|ref|NP_001051642.1| Os03g0807400 [Oryza sativa (... 50.4 2e-06 gi|108711657|gb|ABF99452.1| Calreticulin family protein, expr... 50.4 2e-06 gi|30103014|gb|AAP21427.1| putative calreticulin [Oryza sativa ( 50.4 2e-06 gi|92877003|gb|ABE84253.1| Concanavalin A-like lectin/glucana... 50.1 2e-06 gi|24417462|gb|AAN60341.1| unknown [Arabidopsis thaliana] 50.1 2e-06 gi|79320099|ref|NP_001031199.1| CRT1 (CALRETICULIN 1); calciu... 50.1 2e-06 gi|11131631|sp|O81919|CALR_BETVU Calreticulin precursor >gi|3... 50.1 2e-06 gi|15223517|ref|NP_176030.1| CRT1 (CALRETICULIN 1); calcium i... 50.1 2e-06 gi|11131745|sp|P93508|CALR_RICCO Calreticulin precursor >gi|1... 49.7 3e-06 gi|11131904|sp|Q9XF98|CALR_PRUAR Calreticulin precursor >gi|4... 49.3 4e-06 gi|117165712|dbj|BAF36056.1| calreticulin-1 [Glycine max] 48.9 5e-06 gi|11131769|sp|Q40401|CALR_NICPL Calreticulin precursor >gi|1... 47.0 2e-05 gi|6009911|dbj|BAA85118.1| calreticulin-like protein [Solanum me 47.0 2e-05 gi|115441595|ref|NP_001045077.1| Os01g0895600 [Oryza sativa (... 45.8 4e-05 gi|92867898|gb|ABE78019.1| Concanavalin A-like lectin/glucanase 45.8 4e-05 gi|33517365|gb|AAQ19995.1| calreticulin 3 [Brassica rapa subsp. 45.8 4e-05 gi|21952848|dbj|BAC06263.1| putative calreticulin [Oryza sativa 45.8 4e-05 gi|46981282|gb|AAT07600.1| putative calreticulin protein [Ory... 45.4 6e-05 gi|18390896|ref|NP_563816.1| CRT3 (CALRETICULIN 3); calcium i... 45.4 6e-05 gi|575359|emb|CAA57914.1| calreticulin [Parthenium argentatum] 45.4 6e-05 gi|27311777|gb|AAO00854.1| calreticulin, putative [Arabidopsis t 45.4 6e-05 gi|12643531|sp|O04153|CALR3_ARATH Calreticulin-3 precursor >g... 45.4 6e-05 gi|732893|emb|CAA59694.1| tobacco calretulin [Nicotiana tabacum] 44.3 1e-04 gi|9858814|gb|AAG01147.1|AF283816_1 calreticulin [Pinus taeda] 43.9 2e-04 gi|11131840|sp|Q9SP22|CALR_MAIZE Calreticulin precursor >gi|6... 43.9 2e-04 gi|6664320|gb|AAF22902.1|AC006932_19 T27G7.13 [Arabidopsis thali 43.1 3e-04 gi|11131949|sp|Q9ZPP1|CALR_BERST Calreticulin precursor >gi|4... 43.1 3e-04 gi|115464783|ref|NP_001055991.1| Os05g0507300 [Oryza sativa (... 42.7 4e-04 gi|116056708|emb|CAL52997.1| Calnexin (ISS) [Ostreococcus tauri] 41.6 8e-04 gi|4650852|dbj|BAA77025.1| calreticulin [Lithospermum erythrorhi 37.4 0.016 gi|42571405|ref|NP_973793.1| CRT3 (CALRETICULIN 3); calcium i... 36.6 0.027 gi|2429343|gb|AAB70919.1| calreticulin [Brassica napus] 33.5 0.23 gi|11131843|sp|Q9STD3|CALR_CHLRE Calreticulin precursor >gi|5... 32.0 0.66 gi|115435760|ref|NP_001042638.1| Os01g0259200 [Oryza sativa (... 29.6 3.3 gi|115489802|ref|NP_001067388.1| Os12g0639400 [Oryza sativa (... 29.3 4.3 gi|22531032|gb|AAM97020.1| subtilisin-like protein [Arabidopsis 29.3 4.3 gi|77556817|gb|ABA99613.1| Cell Division Protein AAA ATPase f... 29.3 4.3 gi|15241149|ref|NP_197467.1| subtilase [Arabidopsis thaliana]... 29.3 4.3 gi|115489804|ref|NP_001067389.1| Os12g0639500 [Oryza sativa (... 28.1 9.5 gi|77556818|gb|ABA99614.1| Cell Division Protein AAA ATPase f... 28.1 9.5
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 222 Number of extensions: 1 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 319 Length of database: 101054579 Length adjustment: 75 Effective length of query: 244 Effective length of database: 79803404 Effective search space: 2473905524 Effective search space used: 2473905524 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)