Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168927788-1029-116795353719.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig1 Length=442
Related Structures Score E Sequences producing significant alignments: (Bits) Value gi|914029|gb|AAB32995.1| basic protein 1A, WBP1A=lipid transf... 73.6 3e-13 gi|914030|gb|AAB32996.1| basic protein 1B, WBP1B=lipid transf... 70.9 2e-12 gi|55275991|gb|AAV49759.1| non-specific lipid transfer protei... 69.3 5e-12 gi|13507262|gb|AAK28533.1|AF329829_1 lipid transfer protein prec 69.3 5e-12 gi|7012719|gb|AAF35184.1|AF195863_1 lipid transfer protein precu 69.3 5e-12 gi|50251831|dbj|BAD27761.1| putative nonspecific lipid transf... 69.3 5e-12 gi|66271047|gb|AAY43801.1| FSLTP3 [Gossypium hirsutum] 68.9 6e-12 gi|25992534|gb|AAN77147.1| fiber lipid transfer protein [Gossypi 68.9 6e-12 gi|2829204|gb|AAC00499.1| lipid transfer protein precursor [Goss 68.9 6e-12 gi|11095210|gb|AAG29777.1| lipid transfer protein 3 precursor [G 68.2 1e-11 gi|16555403|gb|AAL23748.1| nonspecific lipid transfer protein [B 68.2 1e-11 gi|2497742|sp|Q42762|NLTP1_GOSHI Nonspecific lipid-transfer p... 68.2 1e-11 gi|2497743|sp|Q43129|NLTP2_GOSHI Nonspecific lipid-transfer p... 68.2 1e-11 gi|115486994|ref|NP_001065984.1| Os12g0114500 [Oryza sativa (... 67.8 1e-11 gi|66271045|gb|AAY43800.1| FSLTP2 [Gossypium hirsutum] 67.8 1e-11 gi|77553485|gb|ABA96281.1| Nonspecific lipid-transfer protein... 67.8 1e-11 gi|7012724|gb|AAF35186.1|AF195865_1 lipid transfer protein precu 67.4 2e-11 gi|40792591|gb|AAR90329.1| lipid transfer protein precursor [Gos 67.0 2e-11 gi|28194086|gb|AAO33394.1|AF467946_1 lipid transfer protein isof 65.9 5e-11 gi|75994570|gb|ABA33849.1| phospholipid transfer protein 1 [Zea 65.9 5e-11 gi|75994584|gb|ABA33856.1| phospholipid transfer protein 1 [Zea 65.9 5e-11 gi|75994582|gb|ABA33855.1| phospholipid transfer protein 1 [Zea 65.9 5e-11 gi|75994566|gb|ABA33847.1| phospholipid transfer protein 1 [Zea 65.9 5e-11 gi|75994568|gb|ABA33848.1| phospholipid transfer protein 1 [Zea 65.9 5e-11 gi|75994578|gb|ABA33853.1| phospholipid transfer protein 1 [Zea 65.9 5e-11 gi|75994580|gb|ABA33854.1| phospholipid transfer protein 1 [Zea 65.9 5e-11 gi|75994596|gb|ABA33862.1| phospholipid transfer protein 1 [Z... 65.9 5e-11 gi|75994588|gb|ABA33858.1| phospholipid transfer protein 1 [Zea 65.9 5e-11 gi|75994572|gb|ABA33850.1| phospholipid transfer protein 1 [Zea 65.9 5e-11 gi|75994564|gb|ABA33846.1| phospholipid transfer protein 1 [Zea 65.9 5e-11 gi|75994586|gb|ABA33857.1| phospholipid transfer protein 1 [Zea 65.9 5e-11 gi|75994604|gb|ABA33866.1| phospholipid transfer protein 1 [Zea 65.9 5e-11 gi|75994592|gb|ABA33860.1| phospholipid transfer protein 1 [Zea 65.9 5e-11 gi|75911268|gb|ABA29446.1| non-specific lipid transfer protein [ 65.9 5e-11 gi|2497755|sp|Q43193|NLTP1_SORBI Nonspecific lipid-transfer p... 65.9 5e-11 gi|629847|pir||S45635 lipid-transfer protein - maize 65.9 5e-11 gi|128388|sp|P19656|NLTP_MAIZE Nonspecific lipid-transfer pro... 65.9 5e-11 gi|1827893|pdb|1MZM| Chain , Maize Nonspecific Lipid Transf... 65.9 5e-11 gi|115483837|ref|NP_001065580.1| Os11g0114900 [Oryza sativa (... 65.1 9e-11 gi|37625029|gb|AAQ96338.1| lipid transfer protein [Vitis aestiva 65.1 9e-11 gi|82712|pir||JH0379 phospholipid transfer protein 6B6 - maiz... 65.1 9e-11 gi|60735408|gb|AAX35806.1| lipid transfer protein 1 precursor [L 64.7 1e-10 gi|422012|pir||S33460 lipid transfer protein - sorghum (fragm... 64.7 1e-10 gi|109255207|gb|ABG27026.1| phosophlipid protein [Gymnadenia con 63.9 2e-10 gi|1498597|gb|AAB06443.1| phospholipid transfer protein [Zea may 63.9 2e-10 gi|75994606|gb|ABA33867.1| phospholipid transfer protein 1 [Zea 63.9 2e-10 gi|28194084|gb|AAO33393.1|AF467945_1 lipid transfer protein isof 63.5 3e-10 gi|75994590|gb|ABA33859.1| phospholipid transfer protein 1 [Z... 63.5 3e-10 gi|2497756|sp|Q43194|NLTP2_SORBI Nonspecific lipid-transfer p... 63.5 3e-10 gi|28193997|gb|AAO33357.1|AF465408_1 nonspecific lipid transf... 63.2 4e-10 gi|510337|emb|CAA80809.1| lipid transfer protein [Oryza sativa ( 63.2 4e-10 gi|7012722|gb|AAF35185.1|AF195864_1 lipid transfer protein precu 62.8 5e-10 gi|18477856|emb|CAC86258.1| lipid transfer protein [Fragaria x a 62.4 6e-10 gi|18424225|ref|NP_568905.1| LTP3 (LIPID TRANSFER PROTEIN 3);... 62.4 6e-10 gi|108863933|gb|ABA91221.2| Nonspecific lipid-transfer protei... 62.0 8e-10 gi|115487000|ref|NP_001065987.1| Os12g0115100 [Oryza sativa (... 62.0 8e-10 gi|75994089|gb|ABA34080.1| phospholipid transfer protein 2 [Z... 62.0 8e-10 gi|75994117|gb|ABA34094.1| phospholipid transfer protein 2 [Z... 62.0 8e-10 gi|75994107|gb|ABA34089.1| phospholipid transfer protein 2 [Z... 62.0 8e-10 gi|75994113|gb|ABA34092.1| phospholipid transfer protein 2 [Z... 62.0 8e-10 gi|75994125|gb|ABA34098.1| phospholipid transfer protein 2 [Z... 62.0 8e-10 gi|75994121|gb|ABA34096.1| phospholipid transfer protein 2 [Z... 62.0 8e-10 gi|115483843|ref|NP_001065583.1| Os11g0115400 [Oryza sativa (... 62.0 8e-10 gi|62738004|pdb|1T12|A Chain A, Solution Structure Of A New Ltp1 62.0 8e-10 gi|9759253|dbj|BAB09777.1| lipid transfer protein-like [Arabidop 62.0 8e-10 gi|68843|pir||EPRZ phospholipid transfer protein homolog - ri... 62.0 8e-10 gi|417371|sp|Q03461|NLTP2_TOBAC Nonspecific lipid-transfer pr... 62.0 8e-10 gi|2497757|sp|Q42952|NLTP1_TOBAC Nonspecific lipid-transfer p... 62.0 8e-10 gi|1619604|emb|CAA69949.1| lipid transfer protein [Oryza sati... 62.0 8e-10 gi|110180523|gb|ABG54494.1| putative allergen Rub i 3 [Rubus ida 61.6 1e-09 gi|32966061|gb|AAP92127.1| lipid transfer protein LPT1 [Oryza... 61.2 1e-09 gi|38492338|gb|AAR22488.1| allergen Mal d 3 [Malus x domestica] 61.2 1e-09 gi|83026871|gb|ABB96481.1| non-specific lipid transfer protei... 61.2 1e-09 gi|77548411|gb|ABA91208.1| expressed protein [Oryza sativa (japo 61.2 1e-09 gi|77548412|gb|ABA91209.1| expressed protein [Oryza sativa (japo 61.2 1e-09 gi|50659859|gb|AAT80649.1| lipid transfer protein precursor [... 61.2 1e-09 gi|14423814|sp|Q9M5X7|NLTP_MALDO Nonspecific lipid-transfer p... 61.2 1e-09 gi|8980444|emb|CAB96874.1| mal d 3 [Malus x domestica] 61.2 1e-09 gi|3172343|gb|AAC18567.1| lipid transfer protein [Oryza sativa] 61.2 1e-09 gi|115486998|ref|NP_001065986.1| Os12g0115000 [Oryza sativa (... 60.8 2e-09 gi|67937767|gb|AAY83342.1| non-specific lipid transfer protei... 60.8 2e-09 gi|21952514|gb|AAM82606.1| putative non-specific lipid transf... 60.8 2e-09 gi|21952516|gb|AAM82607.1|AF525363_1 putative non-specific li... 60.8 2e-09 gi|77553487|gb|ABA96283.1| Nonspecific lipid-transfer protein... 60.8 2e-09 gi|115503789|sp|Q42978|NLTP2_ORYSA Nonspecific lipid-transfer... 60.8 2e-09 gi|2407273|gb|AAB70539.1| lipid transfer protein LPT II [Oryza s 60.8 2e-09 gi|2497745|sp|P93224|NLTP2_SOLLC Nonspecific lipid-transfer p... 60.8 2e-09 gi|951334|gb|AAA74624.1| lipid transfer protein precursor 60.8 2e-09 gi|6225766|sp|Q43766|NLTP3_HORVU Nonspecific lipid-transfer p... 60.8 2e-09 gi|21595294|gb|AAM66088.1| nonspecific lipid-transfer protein... 60.5 2e-09 gi|75994095|gb|ABA34083.1| phospholipid transfer protein 2 [Zea 60.5 2e-09 gi|115485277|ref|NP_001067782.1| Os11g0427800 [Oryza sativa (... 60.5 2e-09 gi|14423813|sp|Q9M5X6|NLTP_PYRCO Nonspecific lipid-transfer p... 60.5 2e-09 gi|50659891|gb|AAT80665.1| lipid transfer protein precursor [Mal 60.1 3e-09 gi|49659945|gb|AAT68263.1| lipid transfer protein [Nicotiana gla 60.1 3e-09 gi|60459407|gb|AAX20049.1| putative non-specific lipid transfer 60.1 3e-09 gi|67937769|gb|AAY83343.1| non-specific lipid transfer protei... 58.9 7e-09 gi|67937773|gb|AAY83345.1| non-specific lipid transfer protei... 58.9 7e-09 gi|62529290|gb|AAX84944.1| non-specific lipid transfer protei... 58.9 7e-09 gi|67937765|gb|AAY83341.1| non-specific lipid transfer protei... 58.5 9e-09
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 364 Number of extensions: 3 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 442 Length of database: 101054579 Length adjustment: 102 Effective length of query: 340 Effective length of database: 72152981 Effective search space: 3246884145 Effective search space used: 3246884145 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 62 (28.5 bits)