Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168928334-28698-138289513711.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig11 Length=516
Score E Sequences producing significant alignments: (Bits) Value gi|115435816|ref|NP_001042666.1| Os01g0264800 [Oryza sativa (... 183 3e-46 gi|56783771|dbj|BAD81183.1| hypothetical protein [Oryza sativ... 183 3e-46 gi|18401792|ref|NP_566599.1| unknown protein [Arabidopsis tha... 149 5e-36 gi|9294072|dbj|BAB02029.1| unnamed protein product [Arabidopsis 132 7e-31 gi|4894628|gb|AAD32567.1| NT3 [Nicotiana tabacum] 52.0 1e-06 gi|15242187|ref|NP_199993.1| unknown protein [Arabidopsis tha... 31.2 2.2 gi|92892746|gb|ABE91380.1| SKP1 component [Medicago truncatula] 30.0 4.8 gi|54291139|dbj|BAD61812.1| hypothetical protein [Oryza sativa ( 29.6 6.3
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 315 Number of extensions: 4 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 516 Length of database: 101054579 Length adjustment: 105 Effective length of query: 411 Effective length of database: 71302934 Effective search space: 4777296578 Effective search space used: 4777296578 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 63 (28.9 bits)