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BLASTX 2.2.15 [Oct-15-2006] 
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman 
(1997), "Gapped BLAST and PSI-BLAST: a new generation of 
protein database search programs", Nucleic Acids Res. 25:3389-3402.

RID: 1168927827-21611-135461921653.BLASTQ1


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
           4,458,890 sequences; 1,532,996,420 total letters

 
If you have any problems or questions with the results of this search 
please refer to the BLAST FAQs
Taxonomy reports

Query=  Contig4
Length=350

Distribution of 8 Blast Hits on the Query Sequence


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|115466682|ref|NP_001056940.1|  Os06g0172200 [Oryza sativa (...  30.0    2.5   Gene info
gi|115448417|ref|NP_001047988.1|  Os02g0726000 [Oryza sativa (...  28.9    5.6   Gene info
gi|115436586|ref|NP_001043051.1|  Os01g0369500 [Oryza sativa (...  28.5    7.3   Gene info
gi|14091842|gb|AAK53845.1|AC011806_22  Putative shock protein [Or  28.5    7.3  
gi|5263313|gb|AAD41415.1|AC007727_4  Contains similarity to gb...  28.5    7.3  
gi|42562225|ref|NP_173582.2|  calcium ion binding [Arabidopsis th  28.5    7.3   UniGene infoGene info
gi|115439095|ref|NP_001043827.1|  Os01g0672300 [Oryza sativa (...  28.5    7.3   Gene info
gi|15528670|dbj|BAB64737.1|  putative shock protein SRC2 [Oryz...  28.5    7.3   Gene info
Alignments

>gi|115466682|ref|NP_001056940.1| Gene info Os06g0172200 [Oryza sativa (japonica cultivar-group)]
 gi|55773691|dbj|BAD72274.1| Gene info calmodulin-like protein [Oryza sativa (japonica cultivar-group)]
 gi|113594980|dbj|BAF18854.1| Gene info Os06g0172200 [Oryza sativa (japonica cultivar-group)]
Length=236

 Score = 30.0 bits (66),  Expect = 2.5
 Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +2

Query  2   QERSQSERRKPDPDTEMS-SFDTFSNDGE  85
           ++R + E R+PDPD ++   F TF +DG+
Sbjct  48  KKRPEEEPRRPDPDADLGIVFSTFDHDGD  76


>gi|115448417|ref|NP_001047988.1| Gene info Os02g0726000 [Oryza sativa (japonica cultivar-group)]
 gi|45735897|dbj|BAD12930.1| Gene info putative fasciclin-like arabinogalactan-protein [Oryza sativa 
(japonica cultivar-group)]
 gi|46390593|dbj|BAD16077.1| Gene info putative fasciclin-like arabinogalactan-protein [Oryza sativa 
(japonica cultivar-group)]
 gi|113537519|dbj|BAF09902.1| Gene info Os02g0726000 [Oryza sativa (japonica cultivar-group)]
Length=266

 Score = 28.9 bits (63),  Expect = 5.6
 Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 0/27 (0%)
 Frame = +2

Query  242  SMPNSPEGYGFHGDPQQGYAAXPSPFG  322
            S PNS +    HG P  G  A PSP G
Sbjct  186  SKPNSTDASSKHGPPNAGAHAAPSPVG  212


>gi|115436586|ref|NP_001043051.1| Gene info Os01g0369500 [Oryza sativa (japonica cultivar-group)]
 gi|113532582|dbj|BAF04965.1| Gene info Os01g0369500 [Oryza sativa (japonica cultivar-group)]
Length=332

 Score = 28.5 bits (62),  Expect = 7.3
 Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 0/28 (0%)
 Frame = +2

Query  233  HGGSMPNSPEGYGFHGDPQQGYAAXPSP  316
            +GG  P   + YG+ G P   Y A P P
Sbjct  244  YGGGYPPHQQQYGYAGQPPYAYNAGPPP  271


>gi|14091842|gb|AAK53845.1|AC011806_22  Putative shock protein [Oryza sativa]
Length=339

 Score = 28.5 bits (62),  Expect = 7.3
 Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 0/28 (0%)
 Frame = +2

Query  233  HGGSMPNSPEGYGFHGDPQQGYAAXPSP  316
            +GG  P   + YG+ G P   Y A P P
Sbjct  251  YGGGYPPHQQQYGYAGQPPYAYNAGPPP  278


>gi|5263313|gb|AAD41415.1|AC007727_4  Contains similarity to gb|U07707 epidermal growth factor receptor 
substrate (eps15) from Homo sapiens and contains 2 PF|00036 
EF hand domains.  ESTs gb|T44428 and gb|AA395440 come from 
this gene. [Arabidopsis thaliana]
Length=1181

 Score = 28.5 bits (62),  Expect = 7.3
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = +2

Query  8     RSQSERRKPDPDTEMSSFDTFSNDGENGGYMAYDSQSYDYSS  133
             R+ S R   +PD   S FD+F+       Y ++++QSYD SS
Sbjct  1081  RTDSMRSTSEPDPFASRFDSFNYQ----RYDSFNAQSYDSSS  1118


>gi|42562225|ref|NP_173582.2| UniGene infoGene info calcium ion binding [Arabidopsis thaliana]
Length=1218

 Score = 28.5 bits (62),  Expect = 7.3
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = +2

Query  8     RSQSERRKPDPDTEMSSFDTFSNDGENGGYMAYDSQSYDYSS  133
             R+ S R   +PD   S FD+F+       Y ++++QSYD SS
Sbjct  1118  RTDSMRSTSEPDPFASRFDSFNYQ----RYDSFNAQSYDSSS  1155


>gi|115439095|ref|NP_001043827.1| Gene info Os01g0672300 [Oryza sativa (japonica cultivar-group)]
 gi|56201851|dbj|BAD73301.1| Gene info homeobox transcription factor-like [Oryza sativa (japonica cultivar-group)]
 gi|113533358|dbj|BAF05741.1| Gene info Os01g0672300 [Oryza sativa (japonica cultivar-group)]
Length=417

 Score = 28.5 bits (62),  Expect = 7.3
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 0/30 (0%)
 Frame = +2

Query  5    ERSQSERRKPDPDTEMSSFDTFSNDGENGG  94
            E   ++R   D D EM   D   +DGE+GG
Sbjct  363  EEDDADRAVDDVDAEMDEDDDIGDDGEDGG  392


>gi|15528670|dbj|BAB64737.1| Gene info putative shock protein SRC2 [Oryza sativa (japonica cultivar-group)]
 gi|15528701|dbj|BAB64767.1| Gene info putative shock protein SRC2 [Oryza sativa (japonica cultivar-group)]
Length=297

 Score = 28.5 bits (62),  Expect = 7.3
 Identities = 11/28 (39%), Positives = 14/28 (50%), Gaps = 0/28 (0%)
 Frame = +2

Query  233  HGGSMPNSPEGYGFHGDPQQGYAAXPSP  316
            +GG  P   + YG+ G P   Y A P P
Sbjct  209  YGGGYPPHQQQYGYAGQPPYAYNAGPPP  236







  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 147
Number of extensions: 1
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 350
Length of database: 101054579
Length adjustment: 84
Effective length of query: 266
Effective length of database: 77253263
Effective search space: 2472104416
Effective search space used: 2472104416
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 61 (28.1 bits)