Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168938010-1164-71660848430.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig112 Length=468
Score E Sequences producing significant alignments: (Bits) Value gi|85070182|gb|ABC69764.1| unknown [Vitis pseudoreticulata] 131 9e-31 gi|15238125|ref|NP_198975.1| unknown protein [Arabidopsis tha... 124 1e-28 gi|83284001|gb|ABC01908.1| putative 24 kDa seed maturation pr... 115 5e-26 gi|18406991|ref|NP_566065.1| unknown protein [Arabidopsis tha... 115 7e-26 gi|15222616|ref|NP_176592.1| unknown protein [Arabidopsis tha... 115 9e-26 gi|15236556|ref|NP_194094.1| unknown protein [Arabidopsis tha... 114 2e-25 gi|15237093|ref|NP_192861.1| unknown protein [Arabidopsis tha... 111 1e-24 gi|115465005|ref|NP_001056102.1| Os05g0526400 [Oryza sativa (... 110 2e-24 gi|42566117|ref|NP_191715.2| unknown protein [Arabidopsis tha... 107 2e-23 gi|115439795|ref|NP_001044177.1| Os01g0736900 [Oryza sativa (... 106 3e-23 gi|13027362|dbj|BAB32723.1| unknown protein [Oryza sativa (ja... 105 7e-23 gi|92874883|gb|ABE83072.1| Reticulon [Medicago truncatula] 97.1 3e-20 gi|79316001|ref|NP_001030913.1| unknown protein [Arabidopsis ... 94.0 2e-19 gi|115445443|ref|NP_001046501.1| Os02g0265900 [Oryza sativa (... 82.8 5e-16 gi|18398810|ref|NP_566371.1| unknown protein [Arabidopsis tha... 80.9 2e-15 gi|30681227|ref|NP_850552.1| unknown protein [Arabidopsis thalia 80.9 2e-15 gi|115468228|ref|NP_001057713.1| Os06g0503400 [Oryza sativa (... 77.4 2e-14 gi|115463129|ref|NP_001055164.1| Os05g0312500 [Oryza sativa (... 75.5 8e-14 gi|115455721|ref|NP_001051461.1| Os03g0781700 [Oryza sativa (... 73.6 3e-13 gi|115434434|ref|NP_001041975.1| Os01g0139000 [Oryza sativa (... 71.2 1e-12 gi|15234108|ref|NP_192032.1| unknown protein [Arabidopsis tha... 70.1 3e-12 gi|115470537|ref|NP_001058867.1| Os07g0142000 [Oryza sativa (... 68.6 1e-11 gi|78714222|gb|ABB51093.1| reticulon [Hordeum vulgare] 63.5 3e-10 gi|15232423|ref|NP_190980.1| unknown protein [Arabidopsis tha... 59.3 6e-09 gi|18401821|ref|NP_566604.1| unknown protein [Arabidopsis tha... 57.8 2e-08 gi|21592845|gb|AAM64795.1| unknown [Arabidopsis thaliana] 57.4 2e-08 gi|62865747|gb|AAY17066.1| m-160-3_1 [Polytrichum juniperinum] 57.0 3e-08 gi|79607888|ref|NP_974276.2| unknown protein [Arabidopsis thalia 53.9 2e-07 gi|79596815|ref|NP_850557.2| unknown protein [Arabidopsis thalia 53.9 2e-07 gi|42572359|ref|NP_974275.1| unknown protein [Arabidopsis tha... 53.9 2e-07 gi|115435410|ref|NP_001042463.1| Os01g0226300 [Oryza sativa (... 50.1 4e-06 gi|115461218|ref|NP_001054209.1| Os04g0670000 [Oryza sativa (... 46.6 4e-05 gi|90399161|emb|CAJ86090.1| H0818H01.12 [Oryza sativa (indica cu 46.6 4e-05 gi|15221333|ref|NP_176990.1| unknown protein [Arabidopsis tha... 43.1 4e-04 gi|56784501|dbj|BAD82652.1| 24 kDa seed maturation protein-li... 42.7 6e-04 gi|115452885|ref|NP_001050043.1| Os03g0336600 [Oryza sativa (... 40.4 0.003 gi|2191131|gb|AAB61018.1| A_IG002N01.8 gene product [Arabidopsis 40.4 0.003 gi|21593206|gb|AAM65155.1| unknown [Arabidopsis thaliana] 39.3 0.006 gi|18402246|ref|NP_566635.1| unknown protein [Arabidopsis tha... 39.3 0.006 gi|30679374|ref|NP_179130.2| unknown protein [Arabidopsis tha... 38.5 0.011 gi|42570787|ref|NP_973467.1| unknown protein [Arabidopsis thalia 38.5 0.011 gi|18406234|ref|NP_565998.1| 3-beta-hydroxy-delta5-steroid de... 30.8 2.2 gi|110743729|dbj|BAE99701.1| hypothetical protein [Arabidopsis t 29.6 4.9 gi|55296322|dbj|BAD68140.1| aminotransferase-like protein [Or... 29.3 6.4 gi|29725558|gb|AAO89082.1| SNF1 kinase complex anchoring protein 28.9 8.4 gi|77745436|gb|ABB02617.1| GAL83-like protein [Solanum tuberosum 28.9 8.4 gi|5702015|emb|CAB52141.1| GAL83 protein [Solanum tuberosum] 28.9 8.4
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 281 Number of extensions: 2 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 468 Length of database: 101054579 Length adjustment: 104 Effective length of query: 364 Effective length of database: 71586283 Effective search space: 3722486716 Effective search space used: 3722486716 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 62 (28.5 bits)