Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168938563-1878-34729057998.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig123 Length=537
Score E Sequences producing significant alignments: (Bits) Value gi|15242362|ref|NP_199345.1| unknown protein [Arabidopsis tha... 120 4e-27 gi|115474939|ref|NP_001061066.1| Os08g0163600 [Oryza sativa (... 75.9 8e-14 gi|37806297|dbj|BAC99811.1| hypothetical protein [Oryza sativ... 75.9 8e-14 gi|53792628|dbj|BAD53642.1| unknown protein [Oryza sativa (japon 69.7 6e-12 gi|116830529|gb|ABK28222.1| unknown [Arabidopsis thaliana] 49.3 8e-06 gi|15231546|ref|NP_189266.1| unknown protein [Arabidopsis tha... 49.3 8e-06 gi|55978705|gb|AAV68814.1| hypothetical protein AT1G13050 [Ar... 43.5 5e-04 gi|15222151|ref|NP_172764.1| unknown protein [Arabidopsis tha... 43.5 5e-04 gi|55978851|gb|AAV68887.1| hypothetical protein AT5G45320 [Arabi 42.0 0.001 gi|115483979|ref|NP_001065651.1| Os11g0130400 [Oryza sativa (... 36.2 0.073 gi|77548517|gb|ABA91314.1| Harpin-induced protein 1 containin... 36.2 0.073 gi|62320276|dbj|BAD94567.1| hypothetical protein [Arabidopsis th 35.8 0.096 gi|79487041|ref|NP_194379.2| unknown protein [Arabidopsis tha... 35.8 0.096 gi|2982457|emb|CAA18221.1| hypothetical protein [Arabidopsis ... 35.8 0.096 gi|115487132|ref|NP_001066053.1| Os12g0127200 [Oryza sativa (... 34.7 0.21 gi|52354565|gb|AAU44603.1| hypothetical protein AT5G56050 [Arabi 34.3 0.28 gi|15241117|ref|NP_200416.1| unknown protein [Arabidopsis tha... 34.3 0.28 gi|85543018|gb|ABC71389.1| unknown [Triticum monococcum] 32.7 0.81 gi|22331362|ref|NP_189334.2| unknown protein [Arabidopsis tha... 32.0 1.4 gi|97974175|dbj|BAE94402.1| Hairpin-induced family protein [I... 31.2 2.4 gi|18401317|ref|NP_565634.1| unknown protein [Arabidopsis tha... 30.4 4.0 gi|115444537|ref|NP_001046048.1| Os02g0174300 [Oryza sativa (... 29.6 6.9 gi|115478605|ref|NP_001062896.1| Os09g0329000 [Oryza sativa (... 29.3 9.0
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 325 Number of extensions: 6 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 537 Length of database: 101054579 Length adjustment: 106 Effective length of query: 431 Effective length of database: 71019585 Effective search space: 5184429705 Effective search space used: 5184429705 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)