Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168938566-2161-71333359053.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig124 Length=880
Score E Sequences producing significant alignments: (Bits) Value gi|2454184|gb|AAB86804.1| pyruvate dehydrogenase E1 beta subu... 523 3e-148 gi|15220670|ref|NP_174304.1| PDH-E1 BETA (PYRUVATE DEHYDROGEN... 523 4e-148 gi|15226781|ref|NP_181006.1| transketolase [Arabidopsis thali... 523 5e-148 gi|21593379|gb|AAM65328.1| putative pyruvate dehydrogenase E1... 521 1e-147 gi|115489596|ref|NP_001067285.1| Os12g0616900 [Oryza sativa (... 499 4e-141 gi|108710070|gb|ABF97865.1| Pyruvate dehydrogenase E1 compone... 497 2e-140 gi|115454325|ref|NP_001050763.1| Os03g0645100 [Oryza sativa (... 497 2e-140 gi|2982328|gb|AAC32149.1| pyruvate dehydrogenase E1 beta subunit 472 1e-132 gi|108796697|ref|YP_636504.1| beta subunit of pyruvate dehydr... 444 2e-124 gi|108796799|ref|YP_636456.1| beta subunit of pyruvate dehydr... 441 1e-123 gi|22711921|ref|NP_683783.1| pyruvate dehydrogenase E1 compon... 437 3e-122 gi|108773225|ref|YP_635737.1| beta subunit of pyruvate dehydr... 429 7e-120 gi|11466393|ref|NP_038396.1| pyruvate dehydrogenase E1 compon... 376 7e-104 gi|116058357|emb|CAL53546.1| Branched chain alpha-keto acid d... 233 6e-61 gi|3850999|gb|AAC72192.1| pyruvate dehydrogenase E1 beta subunit 224 5e-58 gi|15241286|ref|NP_199898.1| pyruvate dehydrogenase (acetyl-t... 223 1e-57 gi|115480067|ref|NP_001063627.1| Os09g0509200 [Oryza sativa (... 222 1e-57 gi|520478|gb|AAA52225.1| pyruvate dehydrogenase E1 beta subun... 221 3e-57 gi|3851003|gb|AAC72194.1| pyruvate dehydrogenase E1 beta subunit 220 5e-57 gi|115477529|ref|NP_001062360.1| Os08g0536000 [Oryza sativa (... 219 9e-57 gi|55792499|gb|AAV65347.1| plastid pyruvate dehydrogenase E1 ... 218 2e-56 gi|3851001|gb|AAC72193.1| pyruvate dehydrogenase E1 beta subunit 218 2e-56 gi|1709454|sp|P52904|ODPB_PEA Pyruvate dehydrogenase E1 compo... 213 8e-55 gi|15222731|ref|NP_175947.1| BCDH BETA1 (BRANCHED-CHAIN ALPHA... 179 2e-44 gi|3746568|gb|AAC64005.1| branched-chain alpha-keto acid deca... 179 2e-44 gi|115470781|ref|NP_001058989.1| Os07g0170100 [Oryza sativa (... 178 2e-44 gi|15231242|ref|NP_187954.1| DIN4 (DARK INDUCIBLE 4); 3-methy... 176 1e-43 gi|116055692|emb|CAL57777.1| Branched chain alpha-keto acid d... 171 3e-42 gi|4530522|gb|AAD22077.1| pyruvate dehydrogenase E1 beta subunit 167 7e-41 gi|51970458|dbj|BAD43921.1| putative 1-D-deoxyxylulose 5-phos... 43.9 9e-04 gi|21593831|gb|AAM65798.1| 1-D-deoxyxylulose 5-phosphate synt... 43.5 0.001 gi|30686265|ref|NP_850620.1| 1-deoxy-D-xylulose-5-phosphate synt 43.5 0.001 gi|18403027|ref|NP_566686.1| 1-deoxy-D-xylulose-5-phosphate synt 43.5 0.001 gi|51969370|dbj|BAD43377.1| putative 1-D-deoxyxylulose 5-phos... 43.5 0.001 gi|11994386|dbj|BAB02345.1| 1-deoxyxylulose-5-phosphate synth... 43.5 0.001 gi|14334452|gb|AAK59424.1| putative DEF (CLA1) protein [Arabidop 42.7 0.002 gi|16226685|gb|AAL16232.1|AF428463_1 AT4g15560/dl3821w [Arabidop 42.7 0.002 gi|1399261|gb|AAC49368.1| DEF 42.7 0.002 gi|25311124|pir||T52289 probable transketolase [imported] - A... 42.7 0.002 gi|15234642|ref|NP_193291.1| CLA1 (CLOROPLASTOS ALTERADOS 1) ... 42.7 0.002 gi|92871781|gb|ABE80687.1| TonB box, N-terminal [Medicago trunca 42.4 0.002 gi|51234083|gb|AAT97962.1| putative 1-deoxy-D-xylulose 5-phos... 42.0 0.003 gi|21322713|emb|CAD22530.1| 1-deoxy-D-xylulose 5-phosphate synth 42.0 0.003 gi|8000868|gb|AAD56390.2|AF182286_1 1-deoxy-D-xylulose-5-phospha 41.6 0.004 gi|5059160|gb|AAD38941.1|AF143812_1 1-D-deoxyxylulose 5-phosp... 41.6 0.004 gi|30315812|sp|O78328|DXS_CAPAN Probable 1-deoxy-D-xylulose-5... 41.6 0.004 gi|11691594|emb|CAA09804.2| 1-deoxyxylulose 5-phosphate synthase 41.2 0.006 gi|92884268|gb|ABE87288.1| Transketolase, C-terminal-like [Medic 40.4 0.009 gi|91771913|gb|ABE60813.1| CLA1-like protein [Brassica rapa] 40.4 0.009 gi|7446974|pir||D71420 hypothetical protein - Arabidopsis thalia 40.4 0.009 gi|46361691|gb|AAS89341.1| 1-deoxy-D-xylulose-5-phosphate syntha 39.7 0.016 gi|92869038|gb|ABE78977.1| Deoxyxylulose-5-phosphate synthase [M 37.7 0.061 gi|3114573|gb|AAC33513.1| 1-deoxyxylulose-5-phosphate synthase [ 37.7 0.061 gi|16930804|gb|AAL32062.1|AF443590_1 deoxy-D-xylulose-5-phosphat 37.4 0.080 gi|61656097|gb|AAX49359.1| 1-deoxy-D-xylulose 5-phosphate syntha 37.4 0.080 gi|35187002|gb|AAQ84169.1| 1-deoxy-D-xylulose 5-phosphate syn... 37.4 0.080 gi|115470975|ref|NP_001059086.1| Os07g0190000 [Oryza sativa (... 37.4 0.080 gi|21322715|emb|CAD22531.1| 1-deoxy-D-xylulose 5-phosphate synth 37.4 0.080 gi|46410858|gb|AAS94123.1| putative 1-deoxy-D-xylulose 5-phos... 37.0 0.10 gi|9971824|gb|AAG10432.1| 1-deoxy-D-xylulose-5-phosphate synthas 37.0 0.10 gi|94421690|gb|ABF18929.1| putative 1-deoxy-D-xylulose 5-phos... 36.6 0.14 gi|10178920|emb|CAC08458.1| 1-D-desoxyxylulose 5-phosphate sy... 36.6 0.14 gi|92871786|gb|ABE80692.1| pyruvate dehydrogenase e1 componen... 36.2 0.18 gi|40317612|gb|AAP14354.2| 1-deoxy-D-xylulose-5-phosphate syn... 36.2 0.18 gi|4185881|emb|CAA07554.1| 1-deoxy-D-xylulose-5-phosphate syn... 35.8 0.23 gi|11493204|emb|CAC17468.1| 1-deoxy-D-xylulose 5-phosphate synth 35.8 0.23 gi|55733939|gb|AAV59446.1| putative 1-deoxy-D-xylulose 5-phos... 34.7 0.52 gi|115463849|ref|NP_001055524.1| Os05g0408900 [Oryza sativa (... 34.7 0.52 gi|2612941|gb|AAB88295.1| CLA1 transketolase-like protein [Oryza 34.7 0.52 gi|30144404|gb|AAP14353.1| 1-deoxy-D-xylulose-5-phosphate syn... 34.3 0.67 gi|15239030|ref|NP_196699.1| 1-deoxy-D-xylulose-5-phosphate s... 33.9 0.88 gi|46488696|gb|AAS99588.1| chloroplast 1-deoxy-D-xylulose-5-p... 33.1 1.5 gi|119358853|emb|CAL52263.2| Dxs 1-deoxy-D-xylulose-5-phospha... 32.7 2.0 gi|46361693|gb|AAS89342.1| 1-deoxy-D-xylulose-5-phosphate syntha 32.7 2.0 gi|118722794|gb|ABL10109.1| 1-D-deoxyxylulose 5-phosphate syntha 32.3 2.6 gi|56785668|gb|AAW28999.1| 1-deoxy-D-xylulose-5-phosphate syntha 32.0 3.3 gi|87299429|dbj|BAE79547.1| 1-deoxyxylulose 5-phosphate synth... 31.6 4.4 gi|117553508|gb|ABK35283.1| deoxyxylulose-5-phosphate synthas... 31.2 5.7 gi|115466348|ref|NP_001056773.1| Os06g0142900 [Oryza sativa (... 31.2 5.7 gi|55295805|dbj|BAD67656.1| 1-deoxy-D-xylulose 5-phosphate sy... 31.2 5.7 gi|55295806|dbj|BAD67657.1| putative 1-deoxy-D-xylulose 5-pho... 31.2 5.7 gi|22797427|emb|CAD22155.2| 1-deoxy-D-xylulose 5-phosphate synth 30.8 7.4
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 579 Number of extensions: 11 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 880 Length of database: 101054579 Length adjustment: 112 Effective length of query: 768 Effective length of database: 69319491 Effective search space: 12546827871 Effective search space used: 12546827871 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 67 (30.4 bits)