Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168938768-29976-63835598744.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig127 Length=542
Related Structures Score E Sequences producing significant alignments: (Bits) Value gi|92877004|gb|ABE84254.1| Universal stress protein (Usp) [Me... 211 1e-54 gi|77994685|gb|ABB13620.1| USP-like protein [Astragalus sinicus] 207 2e-53 gi|115436154|ref|NP_001042835.1| Os01g0303800 [Oryza sativa (... 175 8e-44 gi|115452563|ref|NP_001049882.1| Os03g0305400 [Oryza sativa (... 156 4e-38 gi|92867991|gb|ABE78101.1| universal stress protein family [Medi 149 6e-36 gi|108707726|gb|ABF95521.1| universal stress protein family p... 144 1e-34 gi|15228790|ref|NP_191814.1| unknown protein [Arabidopsis tha... 141 1e-33 gi|92878438|gb|ABE85050.1| Universal stress protein (Usp) [Medic 103 5e-22 gi|115488990|ref|NP_001066982.1| Os12g0552400 [Oryza sativa (... 102 1e-21 gi|55792398|gb|AAV65310.1| universal stress protein [Hordeum vul 100 4e-21 gi|20067187|gb|AAM09541.1|AF491815_1 putative universal stres... 96.7 5e-20 gi|115474017|ref|NP_001060607.1| Os07g0673400 [Oryza sativa (... 95.9 8e-20 gi|115436928|ref|NP_001043170.1| Os01g0511100 [Oryza sativa (... 95.1 1e-19 gi|40539010|gb|AAR87267.1| putative stress-related protein [O... 94.7 2e-19 gi|38016525|gb|AAR07598.1| fiber protein Fb19 [Gossypium barbade 94.7 2e-19 gi|115488992|ref|NP_001066983.1| Os12g0552500 [Oryza sativa (... 94.7 2e-19 gi|18407428|ref|NP_566108.1| unknown protein [Arabidopsis tha... 93.6 4e-19 gi|18399413|ref|NP_566406.1| unknown protein [Arabidopsis thalia 91.7 1e-18 gi|30681321|ref|NP_172445.2| unknown protein [Arabidopsis tha... 91.7 1e-18 gi|30681955|ref|NP_850562.1| unknown protein [Arabidopsis tha... 91.7 1e-18 gi|21555580|gb|AAM63890.1| unknown [Arabidopsis thaliana] 91.3 2e-18 gi|2160182|gb|AAB60745.1| ESTs gb|ATTS1236,gb|T43334,gb|N9701... 91.3 2e-18 gi|46949192|gb|AAT07452.1| putative universal stress protein [Mi 90.1 4e-18 gi|79313191|ref|NP_001030675.1| unknown protein [Arabidopsis tha 89.4 7e-18 gi|5669654|gb|AAD46412.1|AF096262_1 ER6 protein [Lycopersicon es 89.0 1e-17 gi|115448821|ref|NP_001048190.1| Os02g0760500 [Oryza sativa (... 88.2 2e-17 gi|21594903|gb|AAM66054.1| ethylene-responsive protein, putative 87.0 4e-17 gi|30694811|ref|NP_191404.2| unknown protein [Arabidopsis tha... 84.3 2e-16 gi|30694813|ref|NP_850717.1| unknown protein [Arabidopsis thalia 83.2 5e-16 gi|18408994|ref|NP_564927.1| unknown protein [Arabidopsis tha... 79.0 1e-14 gi|30681959|ref|NP_850563.1| unknown protein [Arabidopsis thalia 77.4 3e-14 gi|115463381|ref|NP_001055290.1| Os05g0355400 [Oryza sativa (... 75.9 8e-14 gi|115482168|ref|NP_001064677.1| Os10g0437500 [Oryza sativa (... 72.0 1e-12 gi|115455359|ref|NP_001051280.1| Os03g0750000 [Oryza sativa (... 69.3 8e-12 gi|6735362|emb|CAB68183.1| putative protein [Arabidopsis thalian 68.9 1e-11 gi|6554203|gb|AAF16649.1|AC011661_27 T23J18.3 [Arabidopsis thali 67.4 3e-11 gi|30682187|ref|NP_563888.2| unknown protein [Arabidopsis tha... 67.4 3e-11 gi|30678807|ref|NP_850506.1| unknown protein [Arabidopsis tha... 67.0 4e-11 gi|18401345|ref|NP_566564.1| unknown protein [Arabidopsis tha... 67.0 4e-11 gi|115441061|ref|NP_001044810.1| Os01g0849600 [Oryza sativa (... 65.5 1e-10 gi|119720802|gb|ABL97971.1| unknown [Brassica rapa] 64.3 3e-10 gi|115472689|ref|NP_001059943.1| Os07g0551400 [Oryza sativa (... 63.5 4e-10 gi|28971968|dbj|BAC65369.1| CHP-rich zinc finger protein-like... 63.5 4e-10 gi|53982304|gb|AAV25283.1| hypothetical protein [Oryza sativa (j 63.2 6e-10 gi|115440349|ref|NP_001044454.1| Os01g0783500 [Oryza sativa (... 63.2 6e-10 gi|108708091|gb|ABF95886.1| universal stress protein family p... 62.4 1e-09 gi|92878441|gb|ABE85053.1| Universal stress protein (Usp) [Medic 62.4 1e-09 gi|92875130|gb|ABE83259.1| Universal stress protein (Usp) [Medic 62.0 1e-09 gi|33307141|gb|AAQ02914.1|AF396464_1 C2.6 protein [Pisum sativum 61.2 2e-09 gi|92895945|gb|ABE92953.1| Universal stress protein (Usp) [Medic 60.5 4e-09 gi|51970852|dbj|BAD44118.1| unknown protein [Arabidopsis thalian 59.3 8e-09 gi|3269293|emb|CAA19726.1| putative protein [Arabidopsis thal... 58.9 1e-08 gi|51971917|dbj|BAD44623.1| unknown protein [Arabidopsis thalian 58.9 1e-08 gi|51971835|dbj|BAD44582.1| unknown protein [Arabidopsis thalian 58.9 1e-08 gi|18416966|ref|NP_567770.1| unknown protein [Arabidopsis tha... 58.9 1e-08 gi|115462209|ref|NP_001054704.1| Os05g0157200 [Oryza sativa (... 58.5 1e-08 gi|51968678|dbj|BAD43031.1| unknown protein [Arabidopsis thalian 58.5 1e-08 gi|119720748|gb|ABL97944.1| hypothetical protein [Brassica rapa] 58.2 2e-08 gi|60100214|gb|AAX13276.1| USP family protein [Triticum aestivum 58.2 2e-08 gi|51969908|dbj|BAD43646.1| unknown protein [Arabidopsis thalian 58.2 2e-08 gi|115448175|ref|NP_001047867.1| Os02g0705400 [Oryza sativa (... 58.2 2e-08 gi|115464745|ref|NP_001055972.1| Os05g0501700 [Oryza sativa (... 57.8 2e-08 gi|18395845|ref|NP_566140.1| unknown protein [Arabidopsis tha... 57.0 4e-08 gi|6016711|gb|AAF01537.1|AC009325_7 unknown protein [Arabidopsis 57.0 4e-08 gi|18423628|ref|NP_568808.1| unknown protein [Arabidopsis tha... 57.0 4e-08 gi|8885586|dbj|BAA97516.1| unnamed protein product [Arabidopsis 57.0 4e-08 gi|115464233|ref|NP_001055716.1| Os05g0453700 [Oryza sativa (... 56.6 5e-08 gi|99032632|pdb|2GM3|A Chain A, Crystal Structure Of An Unive... 56.2 7e-08 gi|21536534|gb|AAM60866.1| putative ethylene-responsive protein 56.2 7e-08 gi|115448199|ref|NP_001047879.1| Os02g0707900 [Oryza sativa (... 56.2 7e-08 gi|30681471|ref|NP_850015.1| RD2 [Arabidopsis thaliana] >gi|2... 55.1 2e-07 gi|116056972|emb|CAL51399.1| unnamed protein product [Ostreococc 54.7 2e-07 gi|30681474|ref|NP_850016.1| RD2 [Arabidopsis thaliana] >gi|1... 54.7 2e-07 gi|30693971|ref|NP_566991.2| unknown protein [Arabidopsis tha... 54.3 3e-07 gi|18396497|ref|NP_566198.1| unknown protein [Arabidopsis tha... 53.5 4e-07 gi|30025162|gb|AAP04431.1| pathogen induced protein 2-4 [Hordeum 52.8 8e-07 gi|115448973|ref|NP_001048266.1| Os02g0773200 [Oryza sativa (... 52.0 1e-06 gi|11602747|emb|CAC18556.1| early nodulin ENOD18 [Vicia faba] 52.0 1e-06 gi|15241464|ref|NP_196972.1| unknown protein [Arabidopsis tha... 51.6 2e-06 gi|11602749|emb|CAC18557.1| early nodulin ENOD18 [Vicia faba] 51.6 2e-06 gi|11602751|emb|CAC18558.1| ENOD18 protein [Vicia faba] 50.8 3e-06 gi|18404733|ref|NP_566785.1| unknown protein [Arabidopsis tha... 50.8 3e-06 gi|68299221|emb|CAJ13711.1| putative ethylene response protein [ 48.9 1e-05 gi|15239780|ref|NP_199716.1| unknown protein [Arabidopsis tha... 48.9 1e-05 gi|45720184|emb|CAG14983.1| putative universal stress protein [C 48.5 1e-05 gi|77552033|gb|ABA94830.1| hypothetical protein LOC_Os11g4066... 48.1 2e-05 gi|21555336|gb|AAM63836.1| unknown [Arabidopsis thaliana] 47.4 3e-05 gi|79410471|ref|NP_188758.2| protein binding / zinc ion bindi... 47.0 4e-05 gi|9280222|dbj|BAB01712.1| unnamed protein product [Arabidopsis 47.0 4e-05 gi|115434768|ref|NP_001042142.1| Os01g0170600 [Oryza sativa (... 44.7 2e-04 gi|15215650|gb|AAK91370.1| At2g21620/F2G1.11 [Arabidopsis tha... 44.7 2e-04 gi|4704826|gb|AAD28288.1|AF139378_1 LlDD2A18 [Lupinus luteus] 44.3 3e-04 gi|119638451|gb|ABL85042.1| serine threonine kinase [Brachypodiu 43.1 6e-04 gi|21592322|gb|AAM64273.1| unknown [Arabidopsis thaliana] 42.0 0.001 gi|21536911|gb|AAM61243.1| unknown [Arabidopsis thaliana] 41.6 0.002 gi|7770340|gb|AAF69710.1|AC016041_15 F27J15.25 [Arabidopsis t... 41.6 0.002 gi|18402440|ref|NP_564536.1| unknown protein [Arabidopsis tha... 41.6 0.002 gi|52353761|gb|AAU44327.1| unknown protein [Oryza sativa (japoni 41.2 0.002 gi|15215774|gb|AAK91432.1| At1g11360/T23J18_35 [Arabidopsis t... 38.5 0.015 gi|18409190|ref|NP_564951.1| unknown protein [Arabidopsis tha... 37.4 0.033
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 366 Number of extensions: 4 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 542 Length of database: 101054579 Length adjustment: 106 Effective length of query: 436 Effective length of database: 71019585 Effective search space: 5255449290 Effective search space used: 5255449290 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)