RID=1168938812-801-16971110921.BLASTQ1, Contig130

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168938812-801-16971110921.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig130
Length=498

Distribution of 25 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|16648689|gb|AAL25537.1|  AT3g15460/MJK13_12 [Arabidopsis th...   219    5e-57 
gi|18400776|ref|NP_566514.1|  unknown protein [Arabidopsis tha...   219    5e-57 
gi|18404250|ref|NP_564618.1|  unknown protein [Arabidopsis tha...   206    4e-53 
gi|115447019|ref|NP_001047289.1|  Os02g0591800 [Oryza sativa (...   186    5e-47 
gi|116056625|emb|CAL52914.1|  RNA-binding protein required for...  93.6    3e-19
gi|110743905|dbj|BAE99787.1|  hypothetical protein [Arabidopsis t  32.7    0.68 
gi|15236782|ref|NP_194388.1|  protein binding / ubiquitin-prot...  32.7    0.68  
gi|92892207|gb|ABE91192.1|  hypothetical protein MtrDRAFT_AC14...  30.4    3.4  
gi|16519475|gb|AAL25184.1|AC079852_17  Putative gag-pol polypr...  30.4    3.4  
gi|75812143|dbj|BAD98160.2|  putative ABC transporter [Chlamydomo  30.0    4.4  
gi|110739121|dbj|BAF01477.1|  hypothetical protein [Arabidopsis t  29.6    5.8  
gi|3608153|gb|AAC36186.1|  hypothetical protein [Arabidopsis thal  29.6    5.8  
gi|42569633|ref|NP_181078.2|  catalytic/ protein phosphatase type  29.6    5.8   
gi|115454269|ref|NP_001050735.1|  Os03g0639300 [Oryza sativa (...  29.3    7.5   
gi|108710019|gb|ABF97814.1|  Helix-loop-helix DNA-binding doma...  29.3    7.5  
gi|108710018|gb|ABF97813.1|  Helix-loop-helix DNA-binding doma...  29.3    7.5  
gi|92895563|gb|ABE92756.1|  hypothetical protein MtrDRAFT_AC14...  29.3    7.5  
gi|108796878|ref|YP_636177.1|  beta'' subunit of RNA polymeras...  29.3    7.5   
gi|56311331|emb|CAH69538.1|  putative peroxidase [Zinnia elegans]  28.9    9.8  
gi|32364375|gb|AAP42966.1|  RGC2 resistance protein 4A [Lactuca s  28.9    9.8  
gi|6056403|gb|AAF02867.1|AC009525_1  Hypothetical protein [Arabid  28.9    9.8  
gi|15224605|ref|NP_180663.1|  copper ion binding / electron tr...  28.9    9.8   
gi|22329307|ref|NP_171798.2|  unknown protein [Arabidopsis tha...  28.9    9.8   
gi|42571313|ref|NP_973747.1|  unknown protein [Arabidopsis thalia  28.9    9.8   
gi|115448177|ref|NP_001047868.1|  Os02g0705500 [Oryza sativa (...  28.9    9.8

Alignments

 

>gi|16648689|gb|AAL25537.1|  AT3g15460/MJK13_12 [Arabidopsis thaliana]
 gi|23505881|gb|AAN28800.1|  At3g15460/MJK13_12 [Arabidopsis thaliana]
Length=315

 Score =  219 bits (557),  Expect = 5e-57
 Identities = 108/146 (73%), Positives = 124/146 (84%), Gaps = 5/146 (3%)
 Frame = +3

Query  60   MGKKRKQSETQTAEPTNKDEGAPERPKRTLVGWKDKEEVAKQTESNPDSSSQVFRNKEKV  239
            MG+KRK SET TA P    + APERP+RTL+GWKDK+E A   E++  + + VFRNKEKV
Sbjct  1    MGRKRKHSETVTAAPVK--DSAPERPQRTLLGWKDKKEDA---ENSKPAYASVFRNKEKV  55

Query  240  MVTCSRRINYRYRHLMLNMVSLLPHCKKDNKVESKSSKGATLNELIELSGWSSCLFFECR  419
            +VTCSRRIN+RYRHLMLNMVSLLPHCKKD+KVE+KSS+GATLNELIEL G SSCLFFECR
Sbjct  56   LVTCSRRINFRYRHLMLNMVSLLPHCKKDSKVEAKSSRGATLNELIELKGSSSCLFFECR  115

Query  420  KHQDLYLWMAKSPSGPSGKFLGNAVH  497
            KH+DLY+WM KSP GPS KFL NAVH
Sbjct  116  KHKDLYMWMVKSPGGPSVKFLVNAVH  141


>gi|18400776|ref|NP_566514.1|  unknown protein [Arabidopsis thaliana]
 gi|7021731|gb|AAF35412.1|  unknown protein [Arabidopsis thaliana]
 gi|15795111|dbj|BAB02375.1|  unnamed protein product [Arabidopsis thaliana]
 gi|21592419|gb|AAM64370.1|  unknown [Arabidopsis thaliana]
Length=315

 Score =  219 bits (557),  Expect = 5e-57
 Identities = 108/146 (73%), Positives = 124/146 (84%), Gaps = 5/146 (3%)
 Frame = +3

Query  60   MGKKRKQSETQTAEPTNKDEGAPERPKRTLVGWKDKEEVAKQTESNPDSSSQVFRNKEKV  239
            MG+KRK SET TA P    + APERP+RTL+GWKDK+E A   E++  + + VFRNKEKV
Sbjct  1    MGRKRKHSETVTAAPVK--DSAPERPQRTLLGWKDKKEDA---ENSKPAYASVFRNKEKV  55

Query  240  MVTCSRRINYRYRHLMLNMVSLLPHCKKDNKVESKSSKGATLNELIELSGWSSCLFFECR  419
            +VTCSRRIN+RYRHLMLNMVSLLPHCKKD+KVE+KSS+GATLNELIEL G SSCLFFECR
Sbjct  56   LVTCSRRINFRYRHLMLNMVSLLPHCKKDSKVEAKSSRGATLNELIELKGSSSCLFFECR  115

Query  420  KHQDLYLWMAKSPSGPSGKFLGNAVH  497
            KH+DLY+WM KSP GPS KFL NAVH
Sbjct  116  KHKDLYMWMVKSPGGPSVKFLVNAVH  141


>gi|18404250|ref|NP_564618.1|  unknown protein [Arabidopsis thaliana]
 gi|12324636|gb|AAG52272.1|AC019018_9  unknown protein; 80333-82175 [Arabidopsis thaliana]
 gi|13878055|gb|AAK44105.1|AF370290_1  unknown protein [Arabidopsis thaliana]
 gi|17104647|gb|AAL34212.1|  unknown protein [Arabidopsis thaliana]
Length=320

 Score =  206 bits (523),  Expect = 4e-53
 Identities = 102/147 (69%), Positives = 119/147 (80%), Gaps = 3/147 (2%)
 Frame = +3

Query  60   MGKKRKQSETQTAEPTNK-DEGAPERPKRTLVGWKDKEEVAKQTESNPDSSSQVFRNKEK  236
            MG+KRK SET+   P  K DE AP+RPKRTL+GWKDK E   + E     +S  F+NKEK
Sbjct  1    MGRKRKHSETEAPAPVKKSDEPAPDRPKRTLLGWKDKSE--GEAEKAKALTSSGFKNKEK  58

Query  237  VMVTCSRRINYRYRHLMLNMVSLLPHCKKDNKVESKSSKGATLNELIELSGWSSCLFFEC  416
            V+VTCSRRI++RYR LMLN+VSLLPHCKKD+KVE+KSSKGATLNELIEL   +SCLFFEC
Sbjct  59   VLVTCSRRISFRYRSLMLNIVSLLPHCKKDSKVEAKSSKGATLNELIELKNSNSCLFFEC  118

Query  417  RKHQDLYLWMAKSPSGPSGKFLGNAVH  497
            RKH+DLY+WM KSP+GPS KFL  AVH
Sbjct  119  RKHKDLYMWMVKSPNGPSVKFLVKAVH  145


>gi|115447019|ref|NP_001047289.1|  Os02g0591800 [Oryza sativa (japonica cultivar-group)]
 gi|50726470|dbj|BAD34079.1|  putative brix domain-containing protein [Oryza sativa (japonica 
cultivar-group)]
 gi|113536820|dbj|BAF09203.1|  Os02g0591800 [Oryza sativa (japonica cultivar-group)]
Length=331

 Score =  186 bits (471),  Expect = 5e-47
 Identities = 96/156 (61%), Positives = 110/156 (70%), Gaps = 10/156 (6%)
 Frame = +3

Query  60   MGKKRKQSETQTAEPTNKDEGAPERPKRTLVGWKDKEEVAKQTESNPDSSSQV-------  218
            M KKRK+S    A     DE AP+RP+RTL G+K+K    ++ E+   S  +        
Sbjct  1    MAKKRKRSSDAAAAVEKPDEFAPQRPERTLFGFKEKPADDEEAEAEAASEGEEDAAAAAA  60

Query  219  ---FRNKEKVMVTCSRRINYRYRHLMLNMVSLLPHCKKDNKVESKSSKGATLNELIELSG  389
               FRNKEKV+VTCSRRINYRYRHLM N+VSLLPH KKD+KVESK SKG  LNEL+EL  
Sbjct  61   AAPFRNKEKVLVTCSRRINYRYRHLMQNVVSLLPHAKKDSKVESKQSKGNALNELLELRN  120

Query  390  WSSCLFFECRKHQDLYLWMAKSPSGPSGKFLGNAVH  497
             SSCLFFECRK +DLYLWM KSP GPS KFL NAVH
Sbjct  121  CSSCLFFECRKQKDLYLWMVKSPGGPSVKFLVNAVH  156


>gi|116056625|emb|CAL52914.1|  RNA-binding protein required for biogenesis of the ribosomal 
60S subunit (ISS) [Ostreococcus tauri]
Length=335

 Score = 93.6 bits (231),  Expect = 3e-19
 Identities = 44/89 (49%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
 Frame = +3

Query  231  EKVMVTCSRRINYRYRHLMLNMVSLLPHCKKDNKVESKSSKGATLNELIELSGWSSCLFF  410
            EK +V  SR    RYRHLML++ +L+P+ K+D K+++K+ + A + E  +L G +S +FF
Sbjct  77   EKTLVLASRGTTSRYRHLMLDLTTLVPNAKRDAKMDTKNERSAVV-EAADLRGCTSAMFF  135

Query  411  ECRKHQDLYLWMAKSPSGPSGKFLGNAVH  497
            ECRK QD Y+W+AK+PSGPS KF    VH
Sbjct  136  ECRKRQDCYMWLAKTPSGPSIKFHVENVH  164


>gi|110743905|dbj|BAE99787.1|  hypothetical protein [Arabidopsis thaliana]
Length=335

 Score = 32.7 bits (73),  Expect = 0.68
 Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
 Frame = +3

Query  108  NKDEGAPERPKRTLVGWKDK--EEVAKQTESNPDSSSQV----FRNKEKVM-VTCSRRIN  266
            + ++GA +    +L  WK K  +E +  +++N D    +    ++ KE+V  + CS R +
Sbjct  253  SSEKGASDDQISSLPSWKYKLIDETSDSSQANNDPECCICLAKYKEKEEVRKLPCSHRFH  312

Query  267  YRYRHLMLNMVSLLPHCKKD  326
             +     L ++S  P CK+D
Sbjct  313  LKCVDQWLRIISCCPLCKQD  332


>gi|15236782|ref|NP_194388.1|  protein binding / ubiquitin-protein ligase/ zinc ion binding 
[Arabidopsis thaliana]
 gi|4938496|emb|CAB43854.1|  putative protein [Arabidopsis thaliana]
 gi|7269510|emb|CAB79513.1|  putative protein [Arabidopsis thaliana]
Length=464

 Score = 32.7 bits (73),  Expect = 0.68
 Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
 Frame = +3

Query  108  NKDEGAPERPKRTLVGWKDK--EEVAKQTESNPDSSSQV----FRNKEKVM-VTCSRRIN  266
            + ++GA +    +L  WK K  +E +  +++N D    +    ++ KE+V  + CS R +
Sbjct  382  SSEKGASDDQISSLPSWKYKLIDETSDSSQANNDPECCICLAKYKEKEEVRKLPCSHRFH  441

Query  267  YRYRHLMLNMVSLLPHCKKD  326
             +     L ++S  P CK+D
Sbjct  442  LKCVDQWLRIISCCPLCKQD  461


>gi|92892207|gb|ABE91192.1|  hypothetical protein MtrDRAFT_AC144592g43v1 [Medicago truncatula]
Length=734

 Score = 30.4 bits (67),  Expect = 3.4
 Identities = 25/113 (22%), Positives = 50/113 (44%), Gaps = 16/113 (14%)
 Frame = +3

Query  99   EPTNKDEGAPERPKRTLVGWKDKEEVAKQTESNPDSSSQVFRNKEKVMVTCSRRINYRYR  278
            E T++DE A E         ++K E   + E    SS +  + K+   +  + + +   +
Sbjct  165  EKTSEDEEASE---------EEKSEEKAEKEEEKGSSKKHGKGKDITKLAATLKASRAEK  215

Query  279  HLMLNMVSLLPHCK-KDNKVESKSSKGATLNELIELSGWSSCLFFECRKHQDL  434
                  ++L P C+ K   +ES  +K   + E  E  GW++ +  +   ++DL
Sbjct  216  ------IALRPMCRTKYFNLESLETKAWNMKEFTEPQGWTNFITLQEHTYEDL  262


>gi|16519475|gb|AAL25184.1|AC079852_17  Putative gag-pol polyprotein [Oryza sativa]
 gi|31430130|gb|AAP52088.1|  hypothetical protein LOC_Os10g05370 [Oryza sativa (japonica cultivar-group)]
Length=240

 Score = 30.4 bits (67),  Expect = 3.4
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 0/46 (0%)
 Frame = +3

Query  78   QSETQTAEPTNKDEGAPERPKRTLVGWKDKEEVAKQTESNPDSSSQ  215
            Q+  Q A+  N + GAP  P+R+ V        +K    NP  SS+
Sbjct  69   QASDQAAQVANVERGAPLPPRRSRVSEGSSAPASKVRRGNPTDSSE  114


>gi|75812143|dbj|BAD98160.2|  putative ABC transporter [Chlamydomonas reinhardtii]
Length=1416

 Score = 30.0 bits (66),  Expect = 4.4
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 0/31 (0%)
 Frame = +3

Query  96   AEPTNKDEGAPERPKRTLVGWKDKEEVAKQT  188
            AE   KDE  PE+   T+ GWK K+   +++
Sbjct  657  AEGEKKDEEQPEKKSNTIEGWKHKDSDGRKS  687


>gi|110739121|dbj|BAF01477.1|  hypothetical protein [Arabidopsis thaliana]
Length=456

 Score = 29.6 bits (65),  Expect = 5.8
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +3

Query  75   KQSETQTAEPTNKDEGAPERPKRTLVGWKDKEEVAKQTESNPDSSSQVF-RNKEKVMVT  248
            +++ET+  +    +EG  +R KR   G  D E V K   +  +++ Q F    +KV+ T
Sbjct  290  EENETEEVDNVGVEEGVDKRRKRRKAGTVDHELVLKAMSNGLEATEQAFLEMTDKVLET  348


>gi|3608153|gb|AAC36186.1|  hypothetical protein [Arabidopsis thaliana]
Length=743

 Score = 29.6 bits (65),  Expect = 5.8
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +3

Query  75   KQSETQTAEPTNKDEGAPERPKRTLVGWKDKEEVAKQTESNPDSSSQVF-RNKEKVMVT  248
            +++ET+  +    +EG  +R KR   G  D E V K   +  +++ Q F    +KV+ T
Sbjct  457  EENETEEVDNVGVEEGVDKRRKRRKAGTVDHELVLKAMSNGLEATEQAFLEMTDKVLET  515


>gi|42569633|ref|NP_181078.2|  catalytic/ protein phosphatase type 2C [Arabidopsis thaliana]
Length=783

 Score = 29.6 bits (65),  Expect = 5.8
 Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = +3

Query  75   KQSETQTAEPTNKDEGAPERPKRTLVGWKDKEEVAKQTESNPDSSSQVF-RNKEKVMVT  248
            +++ET+  +    +EG  +R KR   G  D E V K   +  +++ Q F    +KV+ T
Sbjct  457  EENETEEVDNVGVEEGVDKRRKRRKAGTVDHELVLKAMSNGLEATEQAFLEMTDKVLET  515


>gi|115454269|ref|NP_001050735.1|  Os03g0639300 [Oryza sativa (japonica cultivar-group)]
 gi|113549206|dbj|BAF12649.1|  Os03g0639300 [Oryza sativa (japonica cultivar-group)]
Length=334

 Score = 29.3 bits (64),  Expect = 7.5
 Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 26/111 (23%)
 Frame = +3

Query  87   TQTAEPTNKDEGAPERPKRTLVGWKDKEEVAKQTESNPDSSSQVFRNKEKVMVTCSRR--  260
            T T EPT+    + +R +       D  E ++    + +S S     K    +T +RR  
Sbjct  114  TTTTEPTSTSNRSSKRKRL------DTTEDSESPSEDAESESAALARKPPAKMTTARRSR  167

Query  261  ------INYRYRHLMLN-----MVSLLPHCKKDNKVESKSSKGATLNELIE  380
                  ++ R R   +N     +  L+PHC       +K+ K + L+E IE
Sbjct  168  AAEVHNLSERRRRDRINEKMRALQELIPHC-------NKTDKASMLDEAIE  211


>gi|108710019|gb|ABF97814.1|  Helix-loop-helix DNA-binding domain containing protein, expressed 
[Oryza sativa (japonica cultivar-group)]
Length=481

 Score = 29.3 bits (64),  Expect = 7.5
 Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 26/111 (23%)
 Frame = +3

Query  87   TQTAEPTNKDEGAPERPKRTLVGWKDKEEVAKQTESNPDSSSQVFRNKEKVMVTCSRR--  260
            T T EPT+    + +R +       D  E ++    + +S S     K    +T +RR  
Sbjct  265  TTTTEPTSTSNRSSKRKRL------DTTEDSESPSEDAESESAALARKPPAKMTTARRSR  318

Query  261  ------INYRYRHLMLN-----MVSLLPHCKKDNKVESKSSKGATLNELIE  380
                  ++ R R   +N     +  L+PHC       +K+ K + L+E IE
Sbjct  319  AAEVHNLSERRRRDRINEKMRALQELIPHC-------NKTDKASMLDEAIE  362


>gi|108710018|gb|ABF97813.1|  Helix-loop-helix DNA-binding domain containing protein, expressed 
[Oryza sativa (japonica cultivar-group)]
Length=485

 Score = 29.3 bits (64),  Expect = 7.5
 Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 26/111 (23%)
 Frame = +3

Query  87   TQTAEPTNKDEGAPERPKRTLVGWKDKEEVAKQTESNPDSSSQVFRNKEKVMVTCSRR--  260
            T T EPT+    + +R +       D  E ++    + +S S     K    +T +RR  
Sbjct  265  TTTTEPTSTSNRSSKRKRL------DTTEDSESPSEDAESESAALARKPPAKMTTARRSR  318

Query  261  ------INYRYRHLMLN-----MVSLLPHCKKDNKVESKSSKGATLNELIE  380
                  ++ R R   +N     +  L+PHC       +K+ K + L+E IE
Sbjct  319  AAEVHNLSERRRRDRINEKMRALQELIPHC-------NKTDKASMLDEAIE  362


>gi|92895563|gb|ABE92756.1|  hypothetical protein MtrDRAFT_AC144591g19v1 [Medicago truncatula]
Length=90

 Score = 29.3 bits (64),  Expect = 7.5
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
 Frame = +3

Query  288  LNMVSLLPHCKKDNKVESKSSKGATLNELIELSGWSSCLFFECRKHQDLYLWM  446
            L+  SLL    K+ + E  S K    N+L   +G   C FF   ++Q  +LWM
Sbjct  6    LSAHSLLQTFHKEEEFEVASHKEVEANDL--QAGSEKCQFFSEAENQSFHLWM  56


>gi|108796878|ref|YP_636177.1|  beta'' subunit of RNA polymerase [Pseudendoclonium akinetum]
 gi|90111013|sp|Q3ZJ90|RPOC2_PSEAK  DNA-directed RNA polymerase beta'' chain (PEP) (Plastid-encoded 
RNA polymerase beta'' subunit) (RNA polymerase beta'' subunit)
 gi|56159576|gb|AAV80600.1|  beta'' subunit of RNA polymerase [Pseudendoclonium akinetum]
Length=3462

 Score = 29.3 bits (64),  Expect = 7.5
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 0/49 (0%)
 Frame = +3

Query  228  KEKVMVTCSRRINYRYRHLMLNMVSLLPHCKKDNKVESKSSKGATLNEL  374
            K+ V     + +NY+Y H  L + S  P C  +  +    S G +LNE+
Sbjct  837  KQNVQDFKFKNLNYQYFHPFLVLASDPPFCVSEKTLHFMQSCGQSLNEI  885


>gi|56311331|emb|CAH69538.1|  putative peroxidase [Zinnia elegans]
Length=137

 Score = 28.9 bits (63),  Expect = 9.8
 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
 Frame = +3

Query  300  SLLPHCKK--DNKVESKSSKGATLNELIELSG  389
            S +PH     D+ ++  SSKG TLN+L+ LSG
Sbjct  101  SNIPHANSTIDDLIKLFSSKGLTLNDLVVLSG  132


>gi|32364375|gb|AAP42966.1|  RGC2 resistance protein 4A [Lactuca serriola]
Length=133

 Score = 28.9 bits (63),  Expect = 9.8
 Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 6/55 (10%)
 Frame = +3

Query  156  WKDKEEVAKQTESNPDSSSQVFRNKEKVMVTCSRRINYRYRHLMLNMVSLLPHCK  320
            W     + KQ   +P      F N   + + C R I Y +  LM  ++S L H K
Sbjct  5    WNKYFTLPKQQSESP------FHNLTTINIXCCRSIKYLFSPLMAELLSNLKHIK  53


>gi|6056403|gb|AAF02867.1|AC009525_1  Hypothetical protein [Arabidopsis thaliana]
Length=1254

 Score = 28.9 bits (63),  Expect = 9.8
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 0/53 (0%)
 Frame = +3

Query  72   RKQSETQTAEPTNKDEGAPERPKRTLVGWKDKEEVAKQTESNPDSSSQVFRNK  230
            RK       EP N  E  P+R K   +   D   V K T+S   +  Q+ ++K
Sbjct  385  RKDVYLIKGEPLNSLESNPKREKAPSIEHVDYSSVVKGTQSETRNEEQILKSK  437


>gi|15224605|ref|NP_180663.1|  copper ion binding / electron transporter [Arabidopsis thaliana]
 gi|3746072|gb|AAC63847.1|  putative blue copper-binding protein [Arabidopsis thaliana]
 gi|20197226|gb|AAM14981.1|  putative blue copper-binding protein [Arabidopsis thaliana]
 gi|67633566|gb|AAY78707.1|  plastocyanin-like domain-containing protein [Arabidopsis thaliana]
Length=200

 Score = 28.9 bits (63),  Expect = 9.8
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 0/35 (0%)
 Frame = -3

Query  178  ATSSLSFQPTSVLFGLSGAPSSLFVGSAVWVSLCF  74
            A S ++  P     G S AP S    S VW+ LCF
Sbjct  156  AESPVNHAPVQYQMGPSPAPHSAASNSNVWIGLCF  190


>gi|22329307|ref|NP_171798.2|  unknown protein [Arabidopsis thaliana]
 gi|19310595|gb|AAL85028.1|  unknown protein [Arabidopsis thaliana]
Length=1069

 Score = 28.9 bits (63),  Expect = 9.8
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 0/53 (0%)
 Frame = +3

Query  72   RKQSETQTAEPTNKDEGAPERPKRTLVGWKDKEEVAKQTESNPDSSSQVFRNK  230
            RK       EP N  E  P+R K   +   D   V K T+S   +  Q+ ++K
Sbjct  369  RKDVYLIKGEPLNSLESNPKREKAPSIEHVDYSSVVKGTQSETRNEEQILKSK  421


>gi|42571313|ref|NP_973747.1|  unknown protein [Arabidopsis thaliana]
Length=1238

 Score = 28.9 bits (63),  Expect = 9.8
 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 0/53 (0%)
 Frame = +3

Query  72   RKQSETQTAEPTNKDEGAPERPKRTLVGWKDKEEVAKQTESNPDSSSQVFRNK  230
            RK       EP N  E  P+R K   +   D   V K T+S   +  Q+ ++K
Sbjct  369  RKDVYLIKGEPLNSLESNPKREKAPSIEHVDYSSVVKGTQSETRNEEQILKSK  421


>gi|115448177|ref|NP_001047868.1|  Os02g0705500 [Oryza sativa (japonica cultivar-group)]
 gi|41053096|dbj|BAD08039.1|  putative bHLH transcription factor [Oryza sativa (japonica cultivar-group)]
 gi|113537399|dbj|BAF09782.1|  Os02g0705500 [Oryza sativa (japonica cultivar-group)]
Length=361

 Score = 28.9 bits (63),  Expect = 9.8
 Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 32/126 (25%)
 Frame = +3

Query  66   KKRKQSETQTAEPTNKDEGAPE----RPKRTLVGWKDKEEVAKQTESNPDSSSQVF--RN  227
            K+++  + Q  +P + D+ A      RP+R   G K K EVA   +S   S+S V   + 
Sbjct  99   KRQRGKQQQQQQPCHPDQMAAAVGKGRPERARPGAKKKAEVASPKDSPATSASTVTAGQK  158

Query  228  KEKVMVTCSR----------------RINYRYRHLMLNMVSLLPHCKKDNKVESKSSKGA  359
             + + V   R                RI+ R R+L      L+P C   NKV   + K  
Sbjct  159  TDYIHVRARRGQATDSHSLAERVRRERISERMRYLQ----ELVPGC---NKV---TGKAG  208

Query  360  TLNELI  377
             L+E+I
Sbjct  209  MLDEII  214

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 380
Number of extensions: 8
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 498
Length of database: 101054579
Length adjustment: 105
Effective length of query: 393
Effective length of database: 71302934
Effective search space: 4349478974
Effective search space used: 4349478974
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 63 (28.9 bits)