RID=1168929074-11296-100990752535.BLASTQ4, Contig14

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168929074-11296-100990752535.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig14
Length=301

Distribution of 28 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|15237847|ref|NP_197778.1|  structural constituent of riboso...  90.9    1e-18 
gi|21537149|gb|AAM61490.1|  60S ribosomal protein L13, BBC1 prote  89.7    3e-18 
gi|15229064|ref|NP_190470.1|  ATBBC1; structural constituent o...  89.7    3e-18 
gi|730450|sp|P41129|RL132_BRANA  60S ribosomal protein L13-2 (...  89.7    3e-18
gi|119720750|gb|ABL97945.1|  cold induced protein [Brassica rapa]  89.4    4e-18
gi|730449|sp|P41128|RL131_BRANA  60S ribosomal protein L13-1 (...  88.6    6e-18
gi|15229059|ref|NP_190465.1|  structural constituent of riboso...  85.1    7e-17 
gi|37625523|gb|AAQ96375.1|  60S ribosomal protein L13 [Solanum br  84.7    9e-17
gi|76573319|gb|ABA46764.1|  unknown [Solanum tuberosum]            84.7    9e-17 
gi|12580867|emb|CAC27142.1|  60S ribosomal protein L13E [Picea ab  84.7    9e-17
gi|1350664|sp|P49627|RL13_TOBAC  60S ribosomal protein L13 (Cl...  83.6    2e-16
gi|6831610|sp|O48513|RL13_CHLSW  60S ribosomal protein L13 (BB...  60.8    3e-16
gi|115466028|ref|NP_001056613.1|  Os06g0115500 [Oryza sativa (...  80.9    1e-15 
gi|108709460|gb|ABF97255.1|  60S ribosomal protein L13-2, puta...  80.5    2e-15
gi|115453873|ref|NP_001050537.1|  Os03g0576700 [Oryza sativa (...  80.5    2e-15 
gi|47027014|gb|AAT08722.1|  cold-induced protein [Hyacinthus orie  79.7    3e-15
gi|28193496|emb|CAD28610.1|  60S ribosomal protein L13 [Polytomel  69.7    3e-12
gi|19698566|gb|AAL93210.1|AF487458_1  BBC1-like protein [Triticum  45.4    6e-05 
gi|16923265|dbj|BAB71993.1|  BBC1-like protein [Oryza sativa (jap  42.7    4e-04 
gi|28799157|gb|AAO47085.1|  TIR-NBS-LRR disease resistance-like p  32.0    0.67  
gi|110740535|dbj|BAE98373.1|  hypothetical protein [Arabidopsis t  30.0    2.6  
gi|8671857|gb|AAF78420.1|AC009273_26  T1N6.6 [Arabidopsis thalian  30.0    2.6  
gi|48716835|dbj|BAD23533.1|  hypothetical protein [Oryza sativa (  30.0    2.6   
gi|30678174|ref|NP_171675.2|  unknown protein [Arabidopsis thalia  29.6    3.3   
gi|83853820|gb|ABC47853.1|  expressed protein-like protein [Glyci  29.3    4.4

Alignments

 

>gi|15237847|ref|NP_197778.1|  structural constituent of ribosome [Arabidopsis thaliana]
 gi|75309023|sp|Q9FF90|RL133_ARATH  60S ribosomal protein L13-3
 gi|14190435|gb|AAK55698.1|AF378895_1  AT5g23900/MRO11_6 [Arabidopsis thaliana]
 gi|10176857|dbj|BAB10063.1|  60S ribosomal protein L13 [Arabidopsis thaliana]
 gi|15450565|gb|AAK96460.1|  AT5g23900/MRO11_6 [Arabidopsis thaliana]
Length=206

 Score = 90.9 bits (224),  Expect = 1e-18
 Identities = 52/89 (58%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
 Frame = +1

Query  1    KHFRIFPRPTSGPLHPIVHGQTLKHNMKLRAGKGFTLEELNAAGISKKLAPYHRYCR*SP  180
            K  +IFPRPTSGPL P+VHGQTLK+NMK+RAGKGFTLEEL  AGI KKLAP         
Sbjct  40   KAVKIFPRPTSGPLRPVVHGQTLKYNMKVRAGKGFTLEELKVAGIPKKLAPTIGISVDHR  99

Query  181  PQEPVT*GSSSQCFRGLRHTRPKLVVFPR  267
             +     G  S   R L+  + KLVVFPR
Sbjct  100  RKNRSLEGLQSNVQR-LKTYKAKLVVFPR  127


>gi|21537149|gb|AAM61490.1|  60S ribosomal protein L13, BBC1 protein [Arabidopsis thaliana]
Length=206

 Score = 89.7 bits (221),  Expect = 3e-18
 Identities = 50/89 (56%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
 Frame = +1

Query  1    KHFRIFPRPTSGPLHPIVHGQTLKHNMKLRAGKGFTLEELNAAGISKKLAPYHRYCR*SP  180
            K  +IFPRPTSGPL P+VHGQTLK+NMK+R GKGFTLEEL AAGI KKLAP         
Sbjct  40   KAVKIFPRPTSGPLRPVVHGQTLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHR  99

Query  181  PQEPVT*GSSSQCFRGLRHTRPKLVVFPR  267
             +     G  +   R L+  + KLV+FPR
Sbjct  100  RKNRSLEGLQTNVQR-LKTYKTKLVIFPR  127


>gi|15229064|ref|NP_190470.1|  ATBBC1; structural constituent of ribosome [Arabidopsis thaliana]
 gi|30693128|ref|NP_850672.1|  ATBBC1; structural constituent of ribosome [Arabidopsis thaliana]
 gi|79314617|ref|NP_001030831.1|  ATBBC1; structural constituent of ribosome [Arabidopsis thaliana]
 gi|730526|sp|P41127|RL131_ARATH  60S ribosomal protein L13-1 (Protein BBC1 homolog)
 gi|16226381|gb|AAL16152.1|AF428384_1  AT3g49010/T2J13_150 [Arabidopsis thaliana]
 gi|404166|emb|CAA53005.1|  BBC1 protein [Arabidopsis thaliana]
 gi|6522565|emb|CAB62009.1|  60S ribosomal protein L13, BBC1 protein [Arabidopsis thaliana]
 gi|15292841|gb|AAK92791.1|  putative 60S ribosomal protein L13, BBC1 protein [Arabidopsis 
thaliana]
 gi|17473730|gb|AAL38313.1|  60S ribosomal protein L13, BBC1 protein [Arabidopsis thaliana]
 gi|19310763|gb|AAL85112.1|  putative 60S ribosomal protein L13, BBC1 protein [Arabidopsis 
thaliana]
 gi|20148533|gb|AAM10157.1|  60S ribosomal protein L13, BBC1 protein [Arabidopsis thaliana]
Length=206

 Score = 89.7 bits (221),  Expect = 3e-18
 Identities = 50/89 (56%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
 Frame = +1

Query  1    KHFRIFPRPTSGPLHPIVHGQTLKHNMKLRAGKGFTLEELNAAGISKKLAPYHRYCR*SP  180
            K  +IFPRPTSGPL P+VHGQTLK+NMK+R GKGFTLEEL AAGI KKLAP         
Sbjct  40   KAVKIFPRPTSGPLRPVVHGQTLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHR  99

Query  181  PQEPVT*GSSSQCFRGLRHTRPKLVVFPR  267
             +     G  +   R L+  + KLV+FPR
Sbjct  100  RKNRSLEGLQTNVQR-LKTYKTKLVIFPR  127


>gi|730450|sp|P41129|RL132_BRANA  60S ribosomal protein L13-2 (Cold-induced protein C24B)
 gi|398922|emb|CAA80343.1|  cold induced protein (BnC24B) [Brassica napus]
Length=206

 Score = 89.7 bits (221),  Expect = 3e-18
 Identities = 50/89 (56%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
 Frame = +1

Query  1    KHFRIFPRPTSGPLHPIVHGQTLKHNMKLRAGKGFTLEELNAAGISKKLAPYHRYCR*SP  180
            K  +IFPRPT+GPL P+VHGQTLK+NMK+R GKGFTLEEL AAGI KKLAP         
Sbjct  40   KAVKIFPRPTAGPLRPVVHGQTLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGISLDHR  99

Query  181  PQEPVT*GSSSQCFRGLRHTRPKLVVFPR  267
             +     G  S   R L+  + KLV+FPR
Sbjct  100  RKNRSLEGLQSNVQR-LKTYKAKLVIFPR  127


>gi|119720750|gb|ABL97945.1|  cold induced protein [Brassica rapa]
Length=206

 Score = 89.4 bits (220),  Expect = 4e-18
 Identities = 50/89 (56%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
 Frame = +1

Query  1    KHFRIFPRPTSGPLHPIVHGQTLKHNMKLRAGKGFTLEELNAAGISKKLAPYHRYCR*SP  180
            K  +IFPRPT+GPL P+VHGQTLK+NMK+R GKGFTLEEL AAGI KKLAP         
Sbjct  40   KAVKIFPRPTAGPLRPVVHGQTLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGISVDHR  99

Query  181  PQEPVT*GSSSQCFRGLRHTRPKLVVFPR  267
             +     G  S   R L+  + KLV+FPR
Sbjct  100  RKNRSLEGLQSNVQR-LKTYKAKLVIFPR  127


>gi|730449|sp|P41128|RL131_BRANA  60S ribosomal protein L13-1 (Cold-induced protein C24A)
 gi|398918|emb|CAA80341.1|  cold induced protein (BnC24A) [Brassica napus]
Length=206

 Score = 88.6 bits (218),  Expect = 6e-18
 Identities = 49/89 (55%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
 Frame = +1

Query  1    KHFRIFPRPTSGPLHPIVHGQTLKHNMKLRAGKGFTLEELNAAGISKKLAPYHRYCR*SP  180
            K  +IFPRPT+GPL P+VHGQTLK+NMK+R GKGFTLEEL +AGI KKLAP         
Sbjct  40   KAVKIFPRPTAGPLRPVVHGQTLKYNMKVRTGKGFTLEELKSAGIPKKLAPTIGIAVDHR  99

Query  181  PQEPVT*GSSSQCFRGLRHTRPKLVVFPR  267
             +     G  S   R L+  + KLV+FPR
Sbjct  100  RKNRSLEGLQSNVQR-LKTYKAKLVIFPR  127


>gi|15229059|ref|NP_190465.1|  structural constituent of ribosome [Arabidopsis thaliana]
 gi|75313629|sp|Q9SMT4|RL132_ARATH  Putative 60S ribosomal protein L13-2
 gi|6522570|emb|CAB62014.1|  60S ribosomal protein L13 (BBC1)-like [Arabidopsis thaliana]
Length=206

 Score = 85.1 bits (209),  Expect = 7e-17
 Identities = 51/104 (49%), Positives = 67/104 (64%), Gaps = 16/104 (15%)
 Frame = +1

Query  1    KHFRIFPRPTSGPLHPIVHGQTLKHNMKLRAGKGFTLEELNAAGISKKLAP-------YH  159
            K  +IFPRPT+GP+ P+VH QTL +NMK+RAGKGFTLEEL AAGI KKLAP       +H
Sbjct  40   KAVKIFPRPTAGPIRPVVHAQTLTYNMKVRAGKGFTLEELKAAGIPKKLAPTIGISVDHH  99

Query  160  RYCR*SPPQEPVT*GSSSQCFRGLRHTRPKLVVFPRPCSPSLRL  291
            R  R          G  +   R L+  + KLV+FPR C+ ++++
Sbjct  100  RKNR-------SLEGFQTNVQR-LKTYKAKLVIFPR-CARTVKV  134


>gi|37625523|gb|AAQ96375.1|  60S ribosomal protein L13 [Solanum brevidens]
Length=200

 Score = 84.7 bits (208),  Expect = 9e-17
 Identities = 48/89 (53%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
 Frame = +1

Query  1    KHFRIFPRPTSGPLHPIVHGQTLKHNMKLRAGKGFTLEELNAAGISKKLAPYHRYCR*SP  180
            K  +IFPRPT+G L PIVHGQTLK+NMK+RAG+GF+LEEL AAGI KKLAP         
Sbjct  40   KAVKIFPRPTAGSLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHR  99

Query  181  PQEPVT*GSSSQCFRGLRHTRPKLVVFPR  267
             +     G  +   R L+  + KLV+FPR
Sbjct  100  RRNRSLEGLQTNVQR-LKTYKAKLVIFPR  127


>gi|76573319|gb|ABA46764.1|  unknown [Solanum tuberosum]
Length=206

 Score = 84.7 bits (208),  Expect = 9e-17
 Identities = 48/89 (53%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
 Frame = +1

Query  1    KHFRIFPRPTSGPLHPIVHGQTLKHNMKLRAGKGFTLEELNAAGISKKLAPYHRYCR*SP  180
            K  +IFPRPT+G L PIVHGQTLK+NMK+RAG+GF+LEEL AAGI KKLAP         
Sbjct  40   KAVKIFPRPTAGSLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHR  99

Query  181  PQEPVT*GSSSQCFRGLRHTRPKLVVFPR  267
             +     G  +   R L+  + KLV+FPR
Sbjct  100  RRNRSLEGLQTNVQR-LKTYKAKLVIFPR  127


>gi|12580867|emb|CAC27142.1|  60S ribosomal protein L13E [Picea abies]
Length=207

 Score = 84.7 bits (208),  Expect = 9e-17
 Identities = 50/95 (52%), Positives = 61/95 (64%), Gaps = 13/95 (13%)
 Frame = +1

Query  1    KHFRIFPRPTSGPLHPIVHGQTLKHNMKLRAGKGFTLEELNAAGISKKLAPY------HR  162
            K  +IFPRPT+GPL PIVHGQT K+NMK+RAG+GF+LEEL AAGI KKLAP       HR
Sbjct  41   KAVKIFPRPTAGPLRPIVHGQTQKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIAVDHR  100

Query  163  YCR*SPPQEPVT*GSSSQCFRGLRHTRPKLVVFPR  267
                   +   +  S     + L+  + KLVVFPR
Sbjct  101  -------RRNRSLESLQANVQRLKTYKAKLVVFPR  128


 Score = 32.7 bits (73),  Expect = 0.39
 Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +3

Query  186  RTGHLRVFKPMFQRLKTYKAKTSCLPKTVLAKFKAGDS  299
            R   L   +   QRLKTYKAK    P+T   K KAGDS
Sbjct  102  RNRSLESLQANVQRLKTYKAKLVVFPRTA-RKLKAGDS  138


>gi|1350664|sp|P49627|RL13_TOBAC  60S ribosomal protein L13 (Clone 6.2.1)
 gi|467325|gb|AAA72054.1|  [Nicotiana tabacum (clone 6.2.1) mRNA, complete cds.], gene product
Length=202

 Score = 83.6 bits (205),  Expect = 2e-16
 Identities = 53/100 (53%), Positives = 64/100 (64%), Gaps = 2/100 (2%)
 Frame = +1

Query  1    KHFRIFPRPTSGPLHPIVHGQTLKHNMKLRAGKGFTLEELNAAGISKKLAPYHRYCR*SP  180
            K  +I PRPT+G L PIVHGQTLK+NMK+R+G+GF+LEEL AAGI KKLAP         
Sbjct  36   KAVKISPRPTAGTLRPIVHGQTLKYNMKVRSGRGFSLEELKAAGIPKKLAPTIGIAVDHR  95

Query  181  PQEPVT*GSSSQCFRGLRHTRPKLVVFPRPCSPSLRLVIL  300
             +     G  +   R L   + +LVVFPR  S S RLVIL
Sbjct  96   RRNRSLEGLQTNVQR-LEDLQGQLVVFPRRASRS-RLVIL  133


>gi|6831610|sp|O48513|RL13_CHLSW  60S ribosomal protein L13 (BBC1 protein homolog)
 gi|2662188|dbj|BAA23724.1|  BBC1 protein [Chlamydomonas sp. W80]
Length=208

 Score = 60.8 bits (146),  Expect(3) = 3e-16
 Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 0/46 (0%)
 Frame = +1

Query  16   FPRPTSGPLHPIVHGQTLKHNMKLRAGKGFTLEELNAAGISKKLAP  153
            FPRP +G L PIV  QT+K+N K R G+GFTLEEL  AGI  K AP
Sbjct  46   FPRPVAGSLKPIVRCQTVKYNTKQRLGRGFTLEELKEAGIPAKFAP  91


 Score = 40.4 bits (93),  Expect(3) = 3e-16
 Identities = 19/22 (86%), Positives = 20/22 (90%), Gaps = 0/22 (0%)
 Frame = +2

Query  155  TIGIADDHRRKNRSLEGLQANV  220
            T+GIA DHRRKNRSLE LQANV
Sbjct  92   TVGIAVDHRRKNRSLETLQANV  113


 Score = 21.6 bits (44),  Expect(3) = 3e-16
 Identities = 9/25 (36%), Positives = 13/25 (52%), Gaps = 0/25 (0%)
 Frame = +3

Query  198  LRVFKPMFQRLKTYKAKTSCLPKTV  272
            L   +   QRLKTY+A     P+ +
Sbjct  106  LETLQANVQRLKTYRASLVIFPRNM  130


>gi|115466028|ref|NP_001056613.1|  Os06g0115500 [Oryza sativa (japonica cultivar-group)]
 gi|7248415|dbj|BAA92738.1|  putative 60S ribosomal protein L13E [Oryza sativa (japonica cultivar-group)]
 gi|24413953|dbj|BAC22205.1|  putative 60S ribosomal protein L13E [Oryza sativa (japonica cultivar-group)]
 gi|113594653|dbj|BAF18527.1|  Os06g0115500 [Oryza sativa (japonica cultivar-group)]
Length=208

 Score = 80.9 bits (198),  Expect = 1e-15
 Identities = 48/89 (53%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
 Frame = +1

Query  1    KHFRIFPRPTSGPLHPIVHGQTLKHNMKLRAGKGFTLEELNAAGISKKLAPYHRYCR*SP  180
            K  +IFPRPTSGPL PIV  QTLK+NMK RAG+GFTLEEL AAGI KK AP         
Sbjct  41   KAVKIFPRPTSGPLRPIVQCQTLKYNMKSRAGRGFTLEELKAAGIPKKFAPTIGISVDHR  100

Query  181  PQEPVT*GSSSQCFRGLRHTRPKLVVFPR  267
             +     G  +   R L+  + KLV+FPR
Sbjct  101  RKNRSLEGLQANVQR-LKTYKAKLVIFPR  128


>gi|108709460|gb|ABF97255.1|  60S ribosomal protein L13-2, putative, expressed [Oryza sativa 
(japonica cultivar-group)]
Length=196

 Score = 80.5 bits (197),  Expect = 2e-15
 Identities = 48/89 (53%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
 Frame = +1

Query  1    KHFRIFPRPTSGPLHPIVHGQTLKHNMKLRAGKGFTLEELNAAGISKKLAPYHRYCR*SP  180
            K  +IFPRPTSGPL PIV  QTLK+NMK RAG+GFTLEEL AAGI KK AP         
Sbjct  29   KAVKIFPRPTSGPLRPIVQCQTLKYNMKSRAGRGFTLEELKAAGIPKKYAPTIGISVDHR  88

Query  181  PQEPVT*GSSSQCFRGLRHTRPKLVVFPR  267
             +     G  +   R L+  + KLV+FPR
Sbjct  89   RKNRSLEGLQANVQR-LKTYKAKLVIFPR  116


>gi|115453873|ref|NP_001050537.1|  Os03g0576700 [Oryza sativa (japonica cultivar-group)]
 gi|18873677|emb|CAC81268.1|  putative cold-induced protein [Oryza sativa (indica cultivar-group)]
 gi|32493112|gb|AAP85547.1|  ribosomal protein large subunit 13 [Oryza sativa (japonica cultivar-group)]
 gi|38093740|gb|AAR10856.1|  putative 60S ribosomal protein [Oryza sativa (japonica cultivar-group)]
 gi|108709459|gb|ABF97254.1|  60S ribosomal protein L13-2, putative, expressed [Oryza sativa 
(japonica cultivar-group)]
 gi|113549008|dbj|BAF12451.1|  Os03g0576700 [Oryza sativa (japonica cultivar-group)]
Length=208

 Score = 80.5 bits (197),  Expect = 2e-15
 Identities = 48/89 (53%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
 Frame = +1

Query  1    KHFRIFPRPTSGPLHPIVHGQTLKHNMKLRAGKGFTLEELNAAGISKKLAPYHRYCR*SP  180
            K  +IFPRPTSGPL PIV  QTLK+NMK RAG+GFTLEEL AAGI KK AP         
Sbjct  41   KAVKIFPRPTSGPLRPIVQCQTLKYNMKSRAGRGFTLEELKAAGIPKKYAPTIGISVDHR  100

Query  181  PQEPVT*GSSSQCFRGLRHTRPKLVVFPR  267
             +     G  +   R L+  + KLV+FPR
Sbjct  101  RKNRSLEGLQANVQR-LKTYKAKLVIFPR  128


>gi|47027014|gb|AAT08722.1|  cold-induced protein [Hyacinthus orientalis]
Length=185

 Score = 79.7 bits (195),  Expect = 3e-15
 Identities = 45/89 (50%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
 Frame = +1

Query  1    KHFRIFPRPTSGPLHPIVHGQTLKHNMKLRAGKGFTLEELNAAGISKKLAPYHRYCR*SP  180
            K  +IFPRPT+GPL P+VH QTLK+NMK RAG+GF+LEEL  AGI KK AP         
Sbjct  31   KAVKIFPRPTAGPLRPVVHCQTLKYNMKTRAGRGFSLEELKMAGIPKKWAPTVGIAVDHR  90

Query  181  PQEPVT*GSSSQCFRGLRHTRPKLVVFPR  267
             +     G  +   R L+  + KLV+FPR
Sbjct  91   RRNRSLEGLQANVQR-LKEYKAKLVIFPR  118


>gi|28193496|emb|CAD28610.1|  60S ribosomal protein L13 [Polytomella sp. Pringsheim 198.80]
Length=207

 Score = 69.7 bits (169),  Expect = 3e-12
 Identities = 40/86 (46%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
 Frame = +1

Query  10   RIFPRPTSGPLHPIVHGQTLKHNMKLRAGKGFTLEELNAAGISKKLAPYHRYCR*SPPQE  189
            ++FPRP +G L PIVHGQT+K+N KLR G+GFTL EL  AGI  K AP          + 
Sbjct  44   KVFPRPVAGSLKPIVHGQTVKYNSKLRLGRGFTLAELKEAGIPAKFAPTIGISVDYRRRN  103

Query  190  PVT*GSSSQCFRGLRHTRPKLVVFPR  267
                G      R L+  R  LV+FPR
Sbjct  104  KSVEGLQENANR-LKAYRSNLVIFPR  128


>gi|19698566|gb|AAL93210.1|AF487458_1  BBC1-like protein [Triticum aestivum]
Length=142

 Score = 45.4 bits (106),  Expect = 6e-05
 Identities = 30/63 (47%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
 Frame = +1

Query  79   MKLRAGKGFTLEELNAAGISKKLAPYHRYCR*SPPQEPVT*GSSSQCFRGLRHTRPKLVV  258
            MK RAG+GFTLEEL +AGI KKLAP          +     G  S   R L+  + KLV+
Sbjct  1    MKARAGRGFTLEELKSAGIPKKLAPTIGISVDHRRKNRSLEGMQSNIQR-LKTYKAKLVI  59

Query  259  FPR  267
            FPR
Sbjct  60   FPR  62


>gi|16923265|dbj|BAB71993.1|  BBC1-like protein [Oryza sativa (japonica cultivar-group)]
Length=142

 Score = 42.7 bits (99),  Expect = 4e-04
 Identities = 29/63 (46%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
 Frame = +1

Query  79   MKLRAGKGFTLEELNAAGISKKLAPYHRYCR*SPPQEPVT*GSSSQCFRGLRHTRPKLVV  258
            MK RAG+GFTLEEL AAGI KK AP          +     G  +   R L+  + KLV+
Sbjct  1    MKSRAGRGFTLEELKAAGIPKKYAPTIGISVDHRRKNRSLEGLQANVQR-LKTYKAKLVI  59

Query  259  FPR  267
            FPR
Sbjct  60   FPR  62


>gi|28799157|gb|AAO47085.1|  TIR-NBS-LRR disease resistance-like protein [Helianthus annuus]
Length=246

 Score = 32.0 bits (71),  Expect = 0.67
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 0/43 (0%)
 Frame = -2

Query  129  SSVKLFKSETLASSQFHVVLQSLAMNNWVKRPRSWPWKDPKVL  1
            S+ K+F    L     H +++    NN  K  R W WKD K L
Sbjct  188  SNKKVFDMHDLVEEMAHYIVRGAHPNNPEKHSRIWKWKDLKCL  230


>gi|110740535|dbj|BAE98373.1|  hypothetical protein [Arabidopsis thaliana]
Length=366

 Score = 30.0 bits (66),  Expect = 2.6
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 0/40 (0%)
 Frame = -3

Query  236  CLKPLKHWLEDPQVTGSCGGDHLQYRW*GASFFEIPAALS  117
            CL P+ H  ED Q+  S     L  RW  AS  E  + +S
Sbjct  89   CLPPINHKREDSQLVASRSSSGLSRRWSSASIGESKSQIS  128


>gi|8671857|gb|AAF78420.1|AC009273_26  T1N6.6 [Arabidopsis thaliana]
Length=832

 Score = 30.0 bits (66),  Expect = 2.6
 Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 0/40 (0%)
 Frame = -3

Query  236  CLKPLKHWLEDPQVTGSCGGDHLQYRW*GASFFEIPAALS  117
            CL P+ H  ED Q+  S     L  RW  AS  E  + +S
Sbjct  87   CLPPINHKREDSQLVASRSSSGLSRRWSSASIGESKSQIS  126


>gi|48716835|dbj|BAD23533.1|  hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length=294

 Score = 30.0 bits (66),  Expect = 2.6
 Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 17/82 (20%)
 Frame = +1

Query  46   PIVHGQTLKHNMKLRAGKGFTLEELNAAGISKKLAPYHRYCR*SPPQEPV-------T*G  204
            P+  G TL+ + + ++GKG        A ISK  A +H      PP  P        T  
Sbjct  4    PLGGGMTLERH-RCQSGKG-------RARISK--AAHHLRTAPHPPAAPPHTVVASSTTN  53

Query  205  SSSQCFRGLRHTRPKLVVFPRP  270
            S+S C  GL H R +L+V  RP
Sbjct  54   SASSCHIGLLHRRMRLIVPSRP  75


>gi|30678174|ref|NP_171675.2|  unknown protein [Arabidopsis thaliana]
Length=742

 Score = 29.6 bits (65),  Expect = 3.3
 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 0/45 (0%)
 Frame = -3

Query  236  CLKPLKHWLEDPQVTGSCGGDHLQYRW*GASFFEIPAALSSSRVK  102
            CL P+ H  ED Q+  S     L  RW  AS  E   A  S  ++
Sbjct  89   CLPPINHKREDSQLVASRSSSGLSRRWSSASIGESKLAQISEELE  133


>gi|83853820|gb|ABC47853.1|  expressed protein-like protein [Glycine max]
Length=817

 Score = 29.3 bits (64),  Expect = 4.4
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
 Frame = -1

Query  166  NTDGKVQVSLKYQQR*ALQE*NPCQLSISCCASKSGHEQLGEE  38
            N + K+Q+S++Y  R  L       LSISC +S   H++ G E
Sbjct  667  NLEAKIQISMEYPLRPPL-----FLLSISCISSGENHDETGLE  704

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 224
Number of extensions: 5
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 301
Length of database: 101054579
Length adjustment: 69
Effective length of query: 232
Effective length of database: 81503498
Effective search space: 2526608438
Effective search space used: 2526608438
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 61 (28.1 bits)