Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168939570-27005-135047309852.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig141 Length=390
Score E Sequences producing significant alignments: (Bits) Value gi|15241803|ref|NP_201045.1| calmodulin binding [Arabidopsis ... 148 5e-36 gi|55295828|dbj|BAD67696.1| calmodulin-binding protein-like [... 126 2e-29 gi|115443683|ref|NP_001045621.1| Os02g0105500 [Oryza sativa (... 119 3e-27 gi|34099892|gb|AAQ57199.1| putative calmodulin-binding protein [ 105 5e-23 gi|115464843|ref|NP_001056021.1| Os05g0512400 [Oryza sativa (... 55.1 7e-08 gi|55295829|dbj|BAD67697.1| calmodulin-binding protein-like [... 44.3 1e-04 gi|115465904|ref|NP_001056551.1| Os06g0104400 [Oryza sativa (... 42.7 4e-04 gi|42565286|ref|NP_189577.2| unknown protein [Arabidopsis tha... 42.7 4e-04 gi|15225945|ref|NP_182147.1| protein binding [Arabidopsis tha... 37.4 0.016 gi|115448331|ref|NP_001047945.1| Os02g0719700 [Oryza sativa (... 37.0 0.021 gi|115485615|ref|NP_001067951.1| Os11g0506800 [Oryza sativa (... 35.4 0.061 gi|77551121|gb|ABA93918.1| BAG domain containing protein, exp... 35.4 0.061 gi|15224683|ref|NP_180085.1| unknown protein [Arabidopsis tha... 32.7 0.39 gi|115451807|ref|NP_001049504.1| Os03g0239200 [Oryza sativa (... 28.5 7.4 gi|110289627|gb|AAP55119.2| expressed protein [Oryza sativa (jap 28.1 9.7 gi|18394492|ref|NP_564026.1| unknown protein [Arabidopsis tha... 28.1 9.7
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 287 Number of extensions: 5 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 390 Length of database: 101054579 Length adjustment: 96 Effective length of query: 294 Effective length of database: 73853075 Effective search space: 2511004550 Effective search space used: 2511004550 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)