Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168929088-15833-33776999042.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig15 Length=352
Score E Sequences producing significant alignments: (Bits) Value gi|54402104|gb|AAV34697.1| ubiquitin-conjugating enzyme [Arachis 148 5e-36 gi|22597164|gb|AAN03469.1| ubiquitin-conjugation enzyme [Glycine 147 8e-36 gi|92872635|gb|ABE81234.1| Ubiquitin-conjugating enzyme, E2 [Med 147 1e-35 gi|28569269|gb|AAL99224.1| ubiquitin-conjugating enzyme E2 [G... 147 1e-35 gi|28569263|gb|AAL99222.1| ubiquitin-conjugating enzyme E2 [G... 147 1e-35 gi|115187616|gb|ABI84263.1| ubiquitin carrier-like protein [Arac 146 2e-35 gi|115461182|ref|NP_001054191.1| Os04g0667800 [Oryza sativa (... 146 2e-35 gi|20086317|gb|AAM08126.1| elicitor and UV light related tran... 146 2e-35 gi|441457|emb|CAA51821.1| ubiquitin conjugating enzyme E2 [So... 146 2e-35 gi|464981|sp|P35135|UBC4_LYCES Ubiquitin-conjugating enzyme E... 146 2e-35 gi|28569259|gb|AAL99219.1| ubiquitin-conjugating enzyme E2 [G... 146 2e-35 gi|456568|gb|AAA64427.1| ubiquitin conjugating enzyme 146 2e-35 gi|28569267|gb|AAL99223.1| ubiquitin-conjugating enzyme E2 [Goss 146 2e-35 gi|11762186|gb|AAG40371.1|AF325019_1 AT4g27960 [Arabidopsis thal 146 2e-35 gi|18417097|ref|NP_567791.1| UBC9 (UBIQUITIN CONJUGATING ENZY... 146 2e-35 gi|115438967|ref|NP_001043763.1| Os01g0658400 [Oryza sativa (... 146 2e-35 gi|115187598|gb|ABI84262.1| ubiquitin-conjugating enzyme 9 [Arac 145 3e-35 gi|40287554|gb|AAR83891.1| ubiquitin-conjugating enzyme 8 [Ca... 145 3e-35 gi|18408001|ref|NP_564828.1| ubiquitin conjugating enzyme/ ub... 145 4e-35 gi|30687803|ref|NP_849462.1| UBC9 (UBIQUITIN CONJUGATING ENZY... 145 4e-35 gi|30693868|ref|NP_851116.1| UBC8 (UBIQUITIN CONJUGATING ENZY... 145 6e-35 gi|21553796|gb|AAM62889.1| E2, ubiquitin-conjugating enzyme UBC8 145 6e-35 gi|21554343|gb|AAM63450.1| E2, ubiquitin-conjugating enzyme 1... 145 6e-35 gi|30693863|ref|NP_851114.1| UBC8 (UBIQUITIN CONJUGATING ENZY... 145 6e-35 gi|18423494|ref|NP_568788.1| UBC10; ubiquitin conjugating enz... 145 6e-35 gi|77416935|gb|ABA81863.1| ubiquitin-conjugating enzyme 8-like [ 144 9e-35 gi|83306206|emb|CAI29540.1| ubiquitin conjugating enzyme E2 [... 144 9e-35 gi|18423829|ref|NP_568835.1| ubiquitin conjugating enzyme/ ub... 144 9e-35 gi|52548244|gb|AAU82109.1| ubiquitin-conjugating enzyme [Triticu 144 1e-34 gi|5762457|gb|AAD51109.1|AF176040_1 ubiquitin-conjugating enz... 144 1e-34 gi|18398206|ref|NP_566331.1| ubiquitin conjugating enzyme/ ub... 142 3e-34 gi|115445413|ref|NP_001046486.1| Os02g0261100 [Oryza sativa (... 142 4e-34 gi|115440721|ref|NP_001044640.1| Os01g0819400 [Oryza sativa (... 142 5e-34 gi|19347859|gb|AAL85988.1| putative E2, ubiquitin-conjugating... 142 5e-34 gi|2668744|gb|AAB88617.1| ubiquitin conjugating enzyme [Zea mays 142 5e-34 gi|21104784|dbj|BAB93371.1| ubiquitin conjugating enzyme [Ory... 142 5e-34 gi|63079015|gb|AAY29571.1| immature spike ubiquitin-conjugati... 140 1e-33 gi|115443863|ref|NP_001045711.1| Os02g0120600 [Oryza sativa (... 139 4e-33 gi|41052626|dbj|BAD08135.1| ubiquitin-conjugating enzyme [Ory... 139 4e-33 gi|30693871|ref|NP_568595.2| UBC8 (UBIQUITIN CONJUGATING ENZY... 138 7e-33 gi|30025160|gb|AAP04430.1| ubiquitin-conjugating enzyme [Hordeum 137 1e-32 gi|4100646|gb|AAD00911.1| putative ubiquitin conjugating enzyme 136 3e-32 gi|6692118|gb|AAF24583.1|AC007764_25 F22C12.2 [Arabidopsis thali 135 4e-32 gi|115478392|ref|NP_001062791.1| Os09g0293400 [Oryza sativa (... 134 7e-32 gi|18398199|ref|NP_565391.1| ubiquitin conjugating enzyme/ ub... 132 3e-31 gi|52851174|emb|CAH58635.1| Ubiquitin-conjugating enzyme [Planta 132 3e-31 gi|51949791|gb|AAU14827.1| ubiquitin conjugating enzyme E2 [Pisu 123 2e-28 gi|18308140|gb|AAL67839.1| putative ubiquitin [Pinus pinaster] 123 2e-28 gi|1373001|gb|AAB02168.1| ubiquitin conjugating enzyme 122 5e-28 gi|18398208|ref|NP_566332.1| ubiquitin conjugating enzyme/ ub... 119 2e-27 gi|89114288|gb|ABD61731.1| ubiquitin conjugating enzyme E2 [Lupi 113 2e-25 gi|1142614|gb|AAA86089.1| ubiquitin conjugating enzyme, E2 110 2e-24 gi|79313223|ref|NP_001030691.1| FUS9 (FUSCA 9); ubiquitin con... 99.0 5e-21 gi|22331064|ref|NP_566459.2| FUS9 (FUSCA 9); ubiquitin conjug... 99.0 5e-21 gi|40287568|gb|AAR83898.1| ubiquitin-conjugating protein [Capsic 95.5 5e-20 gi|50660442|gb|AAT80909.1| ubiquitin conjugating enzyme E2 [Lemn 95.1 7e-20 gi|116058061|emb|CAL54264.1| Ubiquitin-protein ligase (ISS) [Ost 94.0 1e-19 gi|15081749|gb|AAK82529.1| AT5g62540/K19B1_15 [Arabidopsis thali 79.7 5e-19 gi|42565401|gb|AAS20974.1| ubiquitin-conjugating enzyme 9 [Hyaci 91.3 9e-19 gi|18424601|ref|NP_568956.1| ubiquitin conjugating enzyme/ ub... 78.2 1e-18 gi|23505769|gb|AAN28744.1| At5g62540/K19B1_15 [Arabidopsis thali 78.2 1e-18 gi|297880|emb|CAA78716.1| ubiquitin conjugating enzyme [Arabi... 90.5 2e-18 gi|115472979|ref|NP_001060088.1| Os07g0577400 [Oryza sativa (... 87.8 1e-17 gi|92868698|gb|ABE78691.1| Ubiquitin-conjugating enzyme, E2 [Med 87.8 1e-17 gi|34393509|dbj|BAC83070.1| putative elicitor inducible beta-... 87.8 1e-17 gi|51493597|gb|AAU04836.1| ubiquitin-conjugating enzyme [Vitis v 86.7 2e-17 gi|82621144|gb|ABB86260.1| ubiquitin-conjugating protein-like [S 86.3 3e-17 gi|52851176|emb|CAH58636.1| Ubiquitin-conjugating enzyme [Planta 73.6 3e-17 gi|18394114|ref|NP_563951.1| UBC1 (UBIQUITIN CARRIER PROTEIN ... 73.6 3e-17 gi|13516451|dbj|BAB40310.1| ubiquitin-conjugating enzyme (E2)... 73.6 3e-17 gi|18395424|ref|NP_565289.1| ATUBC2; ubiquitin conjugating en... 73.6 3e-17 gi|115468246|ref|NP_001057722.1| Os06g0506600 [Oryza sativa (... 85.9 4e-17 gi|83283991|gb|ABC01903.1| ubiquitin carrier-like protein [Solan 73.2 4e-17 gi|13516453|dbj|BAB40311.1| ubiquitin-conjugating enzyme (E2) [N 73.2 4e-17 gi|45735848|dbj|BAD12883.1| putative ubiquitin conjugating en... 85.5 5e-17 gi|464980|sp|P35130|UBC2_MEDSA Ubiquitin-conjugating enzyme E... 72.8 5e-17 gi|115448359|ref|NP_001047959.1| Os02g0721200 [Oryza sativa (... 84.7 9e-17 gi|76573309|gb|ABA46759.1| ubiquitin-conjugating enzyme-like pro 72.0 9e-17 gi|76160925|gb|ABA40426.1| unknown [Solanum tuberosum] 70.1 3e-16 gi|115448357|ref|NP_001047958.1| Os02g0721100 [Oryza sativa (... 82.8 3e-16 gi|92877345|gb|ABE84481.1| Ubiquitin-conjugating enzyme, E2 [Med 72.8 1e-15 gi|54288726|gb|AAV31741.1| ubiquitin-conjugating enzyme UBC1 [Pi 77.0 2e-14 gi|8118527|gb|AAF73016.1|AF262934_1 ubiquitin conjugating protei 73.2 3e-13 gi|56236462|gb|AAV84587.1| ubiquitin carrier protein [Populus to 73.2 3e-13 gi|115470749|ref|NP_001058973.1| Os07g0166800 [Oryza sativa (... 72.8 3e-13 gi|108711499|gb|ABF99294.1| Ubiquitin-conjugating enzyme E2-1... 72.4 5e-13 gi|108711498|gb|ABF99293.1| Ubiquitin-conjugating enzyme E2-1... 72.4 5e-13 gi|115455843|ref|NP_001051522.1| Os03g0791800 [Oryza sativa (... 72.4 5e-13 gi|81076243|gb|ABB55390.1| ubiquitin-conjugating enzyme E2 7-... 63.2 5e-13 gi|136640|sp|P25866|UBC2_WHEAT Ubiquitin-conjugating enzyme E... 72.0 6e-13 gi|115464311|ref|NP_001055755.1| Os05g0460200 [Oryza sativa (... 65.9 7e-13 gi|2641619|gb|AAC12662.1| ubiquitin-conjugating enzyme protein E 65.9 7e-13 gi|115462439|ref|NP_001054819.1| Os05g0182500 [Oryza sativa (... 71.2 1e-12 gi|115452601|ref|NP_001049901.1| Os03g0308000 [Oryza sativa (... 71.2 1e-12 gi|57900695|gb|AAW57820.1| putative ubiquitin conjugating pro... 71.2 1e-12 gi|115440951|ref|NP_001044755.1| Os01g0839700 [Oryza sativa (... 65.1 1e-12 gi|115466882|ref|NP_001057040.1| Os06g0193000 [Oryza sativa (... 70.5 2e-12 gi|2624417|emb|CAA05772.1| Ubiquitin carrier protein [Zea mays] 64.3 2e-12 gi|66354472|gb|AAY44871.1| ubiquitinating enzyme [Arabidopsis th 69.3 4e-12 gi|18401338|ref|NP_566563.1| ubiquitin conjugating enzyme [Ar... 69.3 4e-12
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 299 Number of extensions: 3 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 352 Length of database: 101054579 Length adjustment: 84 Effective length of query: 268 Effective length of database: 77253263 Effective search space: 2549357679 Effective search space used: 2549357679 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)