Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168940283-11650-49201903278.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig153 Length=287
Score E Sequences producing significant alignments: (Bits) Value gi|37694729|gb|AAQ99275.1| actin-like protein [Triticum aestivum 51.6 1e-20 gi|115456443|ref|NP_001051822.1| Os03g0836000 [Oryza sativa (... 51.2 1e-20 gi|115482882|ref|NP_001065034.1| Os10g0510000 [Oryza sativa (... 51.6 2e-20 gi|58013197|gb|AAW63030.1| actin [Isatis tinctoria] 50.4 3e-20 gi|15242516|ref|NP_196543.1| ACT7 [Arabidopsis thaliana] >gi|... 50.4 3e-20 gi|113367104|gb|ABI34609.1| actin [Aegiceras corniculatum] 50.4 3e-20 gi|4139264|gb|AAD03741.1| actin [Brassica napus] 50.4 4e-20 gi|3219764|sp|P93375|ACT7_TOBAC Actin-104 >gi|1498357|gb|AAB4009 52.8 5e-20 gi|72384439|gb|AAZ67555.1| 52O08_9 [Brassica rapa subsp. pekinen 49.3 6e-20 gi|9408605|gb|AAF87302.1| actin [Magnolia denudata] 52.0 6e-20 gi|20329|emb|CAA33873.1| actin [Oryza sativa (indica cultivar-gr 49.7 6e-20 gi|5726018|gb|AAD48335.1|AF090969_1 actin [Selaginella apoda] 53.1 6e-20 gi|56181504|gb|AAV83799.1| putative actin 1 [Chorispora bungeana 49.3 6e-20 gi|62149360|dbj|BAD93480.1| putative actin [Tricyrtis hirta] 52.0 6e-20 gi|47716314|dbj|BAD20703.1| actin [Gladiolus hybrid cultivar 'Tr 51.6 8e-20 gi|59803293|gb|AAX07755.1| actin [Carica papaya] 52.0 8e-20 gi|9757485|dbj|BAB08106.1| actin [Prunus persica] 52.0 8e-20 gi|115484337|ref|NP_001065830.1| Os11g0163100 [Oryza sativa (... 49.7 1e-19 gi|18252329|gb|AAL66196.1|AF386514_1 actin [Pyrus communis] 48.9 1e-19 gi|6683502|dbj|BAA89213.1| actin isoform A [Mimosa pudica] 48.9 1e-19 gi|7960247|gb|AAF71265.1|AF246715_1 actin-like protein [Phalaeno 50.8 1e-19 gi|9965319|gb|AAG10041.1|AF288226_1 actin [Setaria italica] 50.4 1e-19 gi|1498326|gb|AAB40075.1| actin [Glycine max] 51.6 1e-19 gi|3746940|gb|AAC64128.1| actin 3 [Anemia phyllitidis] 48.9 2e-19 gi|73254861|gb|AAZ74666.1| actin [Cucumis sativus] 50.8 2e-19 gi|12382765|gb|AAG53398.1|AF321852_1 actin [Prunus salicina] 50.4 2e-19 gi|34392648|dbj|BAC82633.1| actin [Costus speciosus] 50.4 2e-19 gi|50058115|dbj|BAD27408.1| actin [Nicotiana tabacum] 51.6 2e-19 gi|6103623|gb|AAF03692.1|AF172094_1 actin [Picea rubens] 50.8 2e-19 gi|5230841|gb|AAD41039.1|AF112538_1 actin [Malva pusilla] 50.4 2e-19 gi|23955912|gb|AAN40685.1| actin [Stevia rebaudiana] 50.4 2e-19 gi|32186916|gb|AAP73462.1| actin [Gossypium hirsutum] 50.4 2e-19 gi|32186906|gb|AAP73457.1| actin [Gossypium hirsutum] 50.4 2e-19 gi|32186900|gb|AAP73454.1| actin [Gossypium hirsutum] 50.4 2e-19 gi|32186894|gb|AAP73451.1| actin [Gossypium hirsutum] 50.4 2e-19 gi|32186902|gb|AAP73455.1| actin [Gossypium hirsutum] 50.4 2e-19 gi|9082317|gb|AAF82805.1| actin [Helianthus annuus] 50.4 2e-19 gi|231505|sp|P30173|ACT13_SOLTU Actin-101 >gi|21534|emb|CAA39281 50.4 2e-19 gi|6934188|gb|AAF31643.1|AF143208_1 actin [Vigna radiata] 48.9 2e-19 gi|57118119|gb|AAW34192.1| actin [Linum usitatissimum] 50.4 2e-19 gi|231504|sp|P30172|ACT12_SOLTU Actin-100 >gi|1345579|emb|CAA392 50.4 2e-19 gi|3219761|sp|P93372|ACT4_TOBAC Actin-66 >gi|1498351|gb|AAB40087 51.6 2e-19 gi|1498346|gb|AAB40085.1| actin [Glycine max] 50.8 2e-19 gi|110612122|gb|ABG78035.1| actin [Morus alba] 50.4 2e-19 gi|116812230|dbj|BAF36000.1| actin [Rosa hybrid cultivar] 50.4 2e-19 gi|114148912|gb|ABI51282.1| actin [Hibiscus cannabinus] 50.4 2e-19 gi|62149362|dbj|BAD93481.1| putative actin [Tricyrtis hirta] 52.0 2e-19 gi|62149366|dbj|BAD93483.1| putative actin [Agapanthus praecox] 48.1 2e-19 gi|22266663|dbj|BAC07538.1| actin [Vitis labrusca x Vitis vinife 50.4 2e-19 gi|62149364|dbj|BAD93482.1| putative actin [Agapanthus praecox] 48.1 2e-19 gi|70888331|gb|AAZ13765.1| actin [Populus tremula] 50.4 2e-19 gi|92876001|gb|ABE83769.1| Actin/actin-like [Medicago truncatula 50.8 3e-19 gi|115461639|ref|NP_001054419.1| Os05g0106600 [Oryza sativa (... 50.4 3e-19 gi|231495|sp|P30164|ACT1_PEA Actin-1 >gi|20637|emb|CAA47899.1| a 50.8 3e-19 gi|231499|sp|P30165|ACT2_PEA Actin-2 >gi|20635|emb|CAA48609.1| a 50.8 3e-19 gi|110086028|gb|ABG49457.1| actin 1 [Boehmeria nivea] 50.4 3e-19 gi|53759189|gb|AAU93346.1| actin [Saccharum officinarum] 50.1 4e-19 gi|76800645|sp|P17300|ACT7_ORYSA Actin-7 >gi|56785196|dbj|BAD... 49.7 4e-19 gi|3219762|sp|P93373|ACT3_TOBAC Actin-54 >gi|1498353|gb|AAB40088 49.7 4e-19 gi|1498332|gb|AAB40078.1| actin [Glycine max] 50.4 4e-19 gi|602958|gb|AAB37229.1| Phalaenopsis sp. 'hybrid SM9108' actin 52.0 4e-19 gi|117662907|gb|ABK55729.1| actin [Cucumis sativus] 49.7 4e-19 gi|34392646|dbj|BAC82632.1| actin [Costus speciosus] 49.3 4e-19 gi|25360145|gb|AAN73054.1| actin [Nicotiana benthamiana] 50.1 4e-19 gi|231496|sp|P30167|ACT3_SOLTU Actin-58 >gi|21536|emb|CAA39278.1 48.9 5e-19 gi|2253219|gb|AAB62881.1| actin 2 [Podocarpus macrophyllus] 49.7 5e-19 gi|1498382|gb|AAB40102.1| actin [Zea mays] 48.1 5e-19 gi|32186910|gb|AAP73459.1| actin [Gossypium hirsutum] 50.4 6e-19 gi|32186912|gb|AAP73460.1| actin [Gossypium hirsutum] 50.4 6e-19 gi|32186904|gb|AAP73456.1| actin [Gossypium hirsutum] 50.4 6e-19 gi|32186892|gb|AAP73450.1| actin [Gossypium hirsutum] 50.4 6e-19 gi|32186898|gb|AAP73453.1| actin [Gossypium hirsutum] 50.4 6e-19 gi|32186908|gb|AAP73458.1| actin [Gossypium hirsutum] 50.4 6e-19 gi|32186890|gb|AAP73449.1| actin [Gossypium hirsutum] 50.4 6e-19 gi|32186896|gb|AAP73452.1| actin [Gossypium hirsutum] 50.4 6e-19 gi|24496452|gb|AAN59956.1| actin [Hordeum vulgare] >gi|585331... 50.4 6e-19 gi|34541966|gb|AAQ74875.1| actin [Trifolium pratense] 49.7 6e-19 gi|54035683|sp|O81221|ACT_GOSHI Actin >gi|3420239|gb|AAC31886.1| 49.3 6e-19 gi|38259662|gb|AAR15174.1| actin [Ricinus communis] 48.9 6e-19 gi|60650116|dbj|BAD90938.1| actin [Pyrus communis] 50.4 6e-19 gi|3219760|sp|P93371|ACT5_TOBAC Actin-93 >gi|1498348|gb|AAB40086 49.3 6e-19 gi|37650549|emb|CAE51207.1| putative actin [Lolium multiflorum] 50.4 7e-19 gi|2244734|dbj|BAA21108.1| actin [Gossypium hirsutum] 50.4 7e-19 gi|1498342|gb|AAB40083.1| actin [Glycine max] 49.3 7e-19 gi|32186914|gb|AAP73461.1| actin [Gossypium hirsutum] 50.4 8e-19 gi|6683504|dbj|BAA89214.1| actin isoform B [Mimosa pudica] 49.3 8e-19 gi|48527433|gb|AAT45848.1| actine [Elaeis guineensis] 48.9 8e-19 gi|23092520|gb|AAN08622.1| actin [Phalaenopsis hybrid cultivar] 48.9 8e-19 gi|7960245|gb|AAF71264.1|AF246714_1 actin-like protein [Phalaeno 48.9 8e-19 gi|81076210|gb|ABB55389.1| actin-like [Solanum tuberosum] 48.9 8e-19 gi|231503|sp|P30171|ACT11_SOLTU Actin-97 >gi|21544|emb|CAA39280. 48.9 8e-19 gi|3219765|sp|P93376|ACT6_TOBAC Actin-103 >gi|1498359|gb|AAB4009 49.3 8e-19 gi|83423376|emb|CAJ44725.1| actin [Capsicum chinense] 48.9 8e-19 gi|73254855|gb|AAZ74664.1| actin [Cucumis sativus] 48.9 8e-19 gi|60223034|dbj|BAD90031.1| actin [Chrysanthemum x morifolium] 48.9 9e-19 gi|111610548|gb|ABH11670.1| actin [Linum usitatissimum] 48.9 9e-19 gi|38699518|gb|AAR27068.1| actin 1 [Ficus carica] 48.1 9e-19 gi|15289940|dbj|BAB63635.1| putative actin [Oryza sativa (japoni 50.8 1e-18 gi|1666228|gb|AAB18641.1| actin [Pisum sativum] >gi|1666230|g... 47.8 1e-18 gi|7212865|gb|AAF40477.1|AF237626_1 actin 1 [Vallisneria gigante 48.9 1e-18
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 164 Number of extensions: 0 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 287 Length of database: 101054579 Length adjustment: 65 Effective length of query: 222 Effective length of database: 82636894 Effective search space: 2479106820 Effective search space used: 2479106820 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)