Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168940998-423-192147396597.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig169 Length=393
Score E Sequences producing significant alignments: (Bits) Value gi|1272349|gb|AAA97903.1| secreted glycoprotein 3 64.3 5e-14 gi|92883020|gb|ABE86763.1| EGF-like, subtype 2; S-locus glyco... 63.5 2e-12 gi|6686398|gb|AAF23832.1|AC007234_4 F1E22.15 [Arabidopsis thalia 63.2 3e-12 gi|15218804|ref|NP_176755.1| ARK1 (A. THALIANA RECEPTOR KINAS... 63.2 3e-12 gi|53791698|dbj|BAD53293.1| putative serine/threonine kinase ... 61.6 3e-12 gi|15220348|ref|NP_172600.1| ATP binding / carbohydrate bindi... 59.7 8e-12 gi|5734724|gb|AAD49989.1|AC007259_2 Very similar to receptor-... 59.7 8e-12 gi|2181190|emb|CAA73134.1| serine/threonine kinase [Brassica ole 57.4 1e-11 gi|2662048|dbj|BAA23676.1| receptor kinase 1 [Brassica rapa] 60.8 3e-11 gi|89027191|gb|ABD59322.1| S locus receptor kinase [Brassica rap 60.8 3e-11 gi|89027189|gb|ABD59321.1| S locus receptor kinase [Brassica rap 60.8 3e-11 gi|1304009|dbj|BAA12675.1| SLG12 [Brassica rapa] 60.5 4e-11 gi|2351154|dbj|BAA21945.1| S glycoprotein [Brassica oleracea] 59.7 7e-11 gi|25137427|dbj|BAC24063.1| S-locus glycoprotein [Brassica olera 60.1 7e-11 gi|25137431|dbj|BAC24065.1| S-locus glycoprotein [Brassica olera 59.7 7e-11 gi|2351148|dbj|BAA21942.1| S glycoprotein [Brassica oleracea] 59.7 7e-11 gi|110738232|dbj|BAF01045.1| serine/threonine kinase - like prot 55.1 9e-11 gi|15234429|ref|NP_193870.1| ATP binding / protein kinase/ pr... 55.1 9e-11 gi|15220540|ref|NP_176355.1| ATP binding / carbohydrate bindi... 61.6 9e-11 gi|4455151|emb|CAA18703.1| putative serine/threonine kinase (... 55.1 9e-11 gi|25137435|dbj|BAC24067.1| S-locus glycoprotein [Brassica olera 59.3 9e-11 gi|547238|gb|AAC60572.1| S-glycoprotein [Brassica rapa] >gi|7... 58.9 1e-10 gi|2351170|dbj|BAA21953.1| S glycoprotein [Brassica rapa] 57.8 1e-10 gi|1272345|gb|AAA97901.1| secreted glycoprotein 1 60.5 2e-10 gi|3327852|dbj|BAA31730.1| S glycoprotein [Raphanus sativus] 58.9 2e-10 gi|2351146|dbj|BAA21941.1| S glycoprotein [Brassica oleracea] 56.6 2e-10 gi|1272351|gb|AAA97904.1| receptor protein kinase 2 60.5 2e-10 gi|92867185|gb|ABE77536.1| S-locus glycoprotein; Curculin-lik... 63.9 2e-10 gi|92873877|gb|ABE82226.1| S-locus glycoprotein; Curculin-lik... 56.2 2e-10 gi|913140|gb|AAB33486.1| ARK2 product/receptor-like serine/th... 56.6 3e-10 gi|92867183|gb|ABE77534.1| Protein kinase; EGF-like, subtype ... 63.2 3e-10 gi|46410842|gb|AAS94115.1| S-locus glycoprotein [Raphanus sativu 58.5 6e-10 gi|2351160|dbj|BAA21948.1| S glycoprotein [Brassica rapa] 57.8 6e-10 gi|3327850|dbj|BAA31729.1| S glycoprotein [Raphanus sativus] 58.5 6e-10 gi|3327854|dbj|BAA31731.1| S glycoprotein [Raphanus sativus] 56.2 7e-10 gi|2351150|dbj|BAA21943.1| S glycoprotein [Brassica oleracea] 56.2 7e-10 gi|15218805|ref|NP_176756.1| ARK2; kinase [Arabidopsis thaliana] 54.7 9e-10 gi|25137441|dbj|BAC24070.1| S-locus glycoprotein [Brassica olera 55.8 9e-10 gi|5821298|dbj|BAA83906.1| SRK13-b [Brassica oleracea] 56.2 1e-09 gi|17894|emb|CAA38995.1| S-locus glycoprotein [Brassica oleracea 56.2 1e-09 gi|5821271|dbj|BAA83748.1| SLG13-b [Brassica oleracea] 56.2 1e-09 gi|5821269|dbj|BAA83747.1| SLG13 [Brassica oleracea] 56.2 1e-09 gi|106364241|dbj|BAE95186.1| S-locus glycoprotein [Brassica oler 55.5 1e-09 gi|134532|sp|P17840|SLSG3_BRAOL S-locus-specific glycoprotein S1 56.2 1e-09 gi|2351134|dbj|BAA21935.1| S glycoprotein [Brassica oleracea] 55.5 1e-09 gi|757505|dbj|BAA07576.1| receptor protein kinase SRK8 [Brass... 53.9 2e-09 gi|62131096|gb|AAX68502.1| putative S-locus receptor kinase [Tri 55.5 2e-09 gi|16506535|gb|AAL17679.1| S-locus glycoprotein [Raphanus sativu 53.5 2e-09 gi|3327840|dbj|BAA31724.1| S glycoprotein [Raphanus sativus] 53.5 2e-09 gi|12483651|dbj|BAB21450.1| S-locus glycoprotein [Brassica rapa] 53.9 2e-09 gi|90265210|emb|CAH67726.1| H0613A10.9 [Oryza sativa (indica ... 51.2 2e-09 gi|115460796|ref|NP_001053998.1| Os04g0634000 [Oryza sativa (... 51.2 2e-09 gi|92873873|gb|ABE82222.1| Protein kinase; S-locus glycoprote... 52.8 2e-09 gi|2342502|dbj|BAA21851.1| S glycoprotein [Brassica oleracea] 54.3 2e-09 gi|25137379|dbj|BAC24039.1| S-locus glycoprotein [Brassica rapa] 54.7 2e-09 gi|913141|gb|AAB33487.1| ARK3 product/receptor-like serine/th... 52.4 3e-09 gi|15234427|ref|NP_193869.1| ARK3; kinase [Arabidopsis thalia... 52.4 3e-09 gi|116309012|emb|CAH66129.1| OSIGBa0135L04.3 [Oryza sativa (indi 54.7 3e-09 gi|92873875|gb|ABE82224.1| Protein kinase; S-locus glycoprote... 55.8 3e-09 gi|1272347|gb|AAA97902.1| secreted glycoprotein 2 58.5 3e-09 gi|2351152|dbj|BAA21944.1| S glycoprotein [Brassica oleracea] 56.2 3e-09 gi|6554181|gb|AAF16627.1|AC011661_5 T23J18.8 [Arabidopsis thalia 51.2 3e-09 gi|38346886|emb|CAE03911.2| OSJNBb0015G09.5 [Oryza sativa (japon 54.3 3e-09 gi|115457364|ref|NP_001052282.1| Os04g0226600 [Oryza sativa (... 54.3 3e-09 gi|92879443|gb|ABE85531.1| EGF-like, subtype 2; S-locus glyco... 53.1 3e-09 gi|17907737|dbj|BAB79442.1| S receptor kinase 32 [Brassica olera 52.8 3e-09 gi|115480549|ref|NP_001063868.1| Os09g0551500 [Oryza sativa (... 56.2 4e-09 gi|167170|gb|AAA33001.1| S-locus glycoprotein >gi|904227|gb|A... 55.5 4e-09 gi|2351156|dbj|BAA21946.1| S glycoprotein [Brassica oleracea] 53.5 4e-09 gi|2351188|dbj|BAA21962.1| S glycoprotein [Brassica oleracea] 53.5 4e-09 gi|2351176|dbj|BAA21956.1| S glycoprotein [Brassica rapa] 53.5 4e-09 gi|25137437|dbj|BAC24068.1| S-locus glycoprotein [Brassica olera 53.5 4e-09 gi|2351132|dbj|BAA21934.1| S glycoprotein [Brassica oleracea] 54.3 4e-09 gi|33146951|dbj|BAC80024.1| putative receptor protein kinase ... 48.5 6e-09 gi|5821294|dbj|BAA83905.1| SRK13 [Brassica oleracea] 53.9 6e-09 gi|115472681|ref|NP_001059939.1| Os07g0550500 [Oryza sativa (... 48.5 6e-09 gi|16506533|gb|AAL17677.1| S-locus glycoprotein [Raphanus sativu 51.2 6e-09 gi|115460788|ref|NP_001053994.1| Os04g0633200 [Oryza sativa (... 50.8 7e-09 gi|38344784|emb|CAE02985.2| OSJNBa0043L09.4 [Oryza sativa (japon 50.8 7e-09 gi|90265204|emb|CAH67720.1| H0613A10.3 [Oryza sativa (indica cul 50.8 7e-09 gi|25137351|dbj|BAC24025.1| S-locus receptor kinase [Brassica ra 52.4 8e-09 gi|2351140|dbj|BAA21938.1| S glycoprotein [Brassica oleracea] 51.6 8e-09 gi|1360709|emb|CAA35963.1| self-incompatibility locus specifi... 52.4 8e-09 gi|25137443|dbj|BAC24071.1| S-locus glycoprotein [Brassica olera 52.4 1e-08 gi|102695210|gb|ABF71371.1| S receptor kinase SRK06 [Arabidopsis 51.2 1e-08 gi|46410850|gb|AAS94119.1| S-locus glycoprotein [Raphanus sativu 50.8 1e-08 gi|15220338|ref|NP_172597.1| ATP binding / carbohydrate bindi... 48.9 1e-08 gi|2598271|emb|CAA74662.1| SFR3 [Brassica oleracea var. acephala 50.8 1e-08 gi|15220362|ref|NP_172608.1| ATP binding / carbohydrate bindi... 49.3 1e-08 gi|5734727|gb|AAD49992.1|AC007259_5 Very similar to receptor-... 48.9 1e-08 gi|15219935|ref|NP_176344.1| ATP binding / carbohydrate bindi... 51.2 1e-08 gi|33945884|emb|CAE45594.1| S-receptor kinase-like protein 1 [Lo 55.1 1e-08 gi|25956274|dbj|BAC41328.1| hypothetical protein [Lotus japonicu 55.1 1e-08 gi|92879448|gb|ABE85536.1| Protein kinase; EGF-like, subtype ... 50.8 2e-08 gi|30314607|dbj|BAC76057.1| S-locus glycoprotein [Brassica rapa] 50.8 2e-08 gi|25137429|dbj|BAC24064.1| S-locus glycoprotein [Brassica olera 52.0 2e-08 gi|25137401|dbj|BAC24050.1| S-locus receptor kinase [Brassica ol 51.6 2e-08 gi|90265208|emb|CAH67724.1| H0613A10.7 [Oryza sativa (indica cul 51.2 2e-08 gi|2351162|dbj|BAA21949.1| S glycoprotein [Brassica rapa] 50.8 2e-08 gi|25137423|dbj|BAC24061.1| S-locus glycoprotein [Brassica olera 51.2 2e-08
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 263 Number of extensions: 5 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 393 Length of database: 101054579 Length adjustment: 97 Effective length of query: 296 Effective length of database: 73569726 Effective search space: 2501370684 Effective search space used: 2501370684 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)