RID=1168941233-6579-135819603069.BLASTQ1, Contig174

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168941233-6579-135819603069.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig174
Length=361

Distribution of 29 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|92893306|gb|ABE91713.1|  Photosystem I protein PsaD [Medicago    142    3e-34
gi|21595031|gb|AAM66066.1|  putative photosystem I reaction ce...   142    3e-34 
gi|131166|sp|P12372|PSAD_LYCES  Photosystem I reaction center ...   142    3e-34 
gi|15218708|ref|NP_171812.1|  unknown protein [Arabidopsis tha...   142    3e-34 
gi|15235503|ref|NP_192186.1|  unknown protein [Arabidopsis tha...   142    3e-34 
gi|5732201|emb|CAB52677.1|  photosystem I subunit II precursor [A   142    3e-34 
gi|34787117|emb|CAD89270.1|  putative photosystem I reaction c...   142    4e-34 
gi|417544|sp|P32869|PSAD_CUCSA  Photosystem I reaction center ...   142    4e-34
gi|21293|emb|CAA68728.1|  unnamed protein product [Spinacia olera   142    5e-34
gi|21289|emb|CAA32182.1|  unnamed protein product [Spinacia olera   142    5e-34
gi|19855891|sp|P12353|PSAD_SPIOL  Photosystem I reaction cente...   142    5e-34
gi|407769|dbj|BAA02871.1|  PSI-D1 precursor [Nicotiana sylvestris   141    6e-34
gi|131167|sp|P29302|PSAD_NICSY  Photosystem I reaction center ...   138    5e-33
gi|548603|sp|P36213|PSAD_HORVU  Photosystem I reaction center ...   137    9e-33
gi|115477831|ref|NP_001062511.1|  Os08g0560900 [Oryza sativa (...   136    2e-32 
gi|1488649|emb|CAA54744.1|  psaD [Spinacia oleracea]                130    1e-30
gi|2499965|sp|Q39615|PSAD_CHLRE  Photosystem I reaction center...   115    6e-26
gi|110681492|emb|CAL25356.1|  photosystem I reaction center su...  99.8    3e-21
gi|68565661|sp|P84563|PSAD_POPEU  Photosystem I reaction cente...  58.9    5e-09
gi|116055302|emb|CAL57698.1|  PSI reaction center, subunit II (IS  53.1    3e-07
gi|7677044|gb|AAF67002.1|AF147726_1  ferredoxin-binding subunit [  46.2    3e-05 
gi|1916314|gb|AAB51150.1|  subunit II of photosystem I [Picea abi  45.8    4e-05
gi|544747|gb|AAB29525.1|  PSI-D2=18.5 kda photosystem I psaD p...  40.4    0.002
gi|478509|pir||PQ0669  photosystem I 17.5K D2 chain - common t...  38.1    0.009
gi|131168|sp|P20117|PSAD_PEA  Photosystem I reaction center su...  33.1    0.30 
gi|14549150|gb|AAK08984.1|  glycine-rich protein LeGRP1 [Lycopers  29.3    4.4  
gi|51849615|dbj|BAD42337.1|  trypsin [Nannochloris bacillaris]     28.9    5.7  
gi|11527515|dbj|BAB18656.1|  maturase [Blyxa japonica]             28.9    5.7  
gi|282834|pir||S23300  photosystem I chain II precursor - spinach  28.1    9.7

Alignments

 

>gi|92893306|gb|ABE91713.1|  Photosystem I protein PsaD [Medicago truncatula]
Length=209

 Score =  142 bits (359),  Expect = 3e-34
 Identities = 70/77 (90%), Positives = 73/77 (94%), Gaps = 1/77 (1%)
 Frame = +2

Query  131  PVGFTPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWDSPKEQISEMPTXFGAAIMRQ  310
            PVGFTPPELDP+TPSPIF GSTGGLLRKAQVEEFYVITW+SPKEQI EMPT  GAAIMR+
Sbjct  65   PVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTG-GAAIMRE  123

Query  311  GPNLLKLARKEQCLALG  361
            GPNLLKLARKEQCLALG
Sbjct  124  GPNLLKLARKEQCLALG  140


>gi|21595031|gb|AAM66066.1|  putative photosystem I reaction center subunit II precursor [Arabidopsis 
thaliana]
Length=208

 Score =  142 bits (359),  Expect = 3e-34
 Identities = 70/77 (90%), Positives = 74/77 (96%), Gaps = 1/77 (1%)
 Frame = +2

Query  131  PVGFTPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWDSPKEQISEMPTXFGAAIMRQ  310
            PVGFTPP+LDP+TPSPIFAGSTGGLLRKAQVEEFYVITW+SPKEQI EMPT  GAAIMR+
Sbjct  64   PVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIFEMPTG-GAAIMRE  122

Query  311  GPNLLKLARKEQCLALG  361
            GPNLLKLARKEQCLALG
Sbjct  123  GPNLLKLARKEQCLALG  139


>gi|131166|sp|P12372|PSAD_LYCES  Photosystem I reaction center subunit II, chloroplast precursor 
(Photosystem I 20 kDa subunit) (PSI-D)
 gi|170492|gb|AAA34185.1|  photosystem I subunit II protein precursor
 gi|226544|prf||1601516A  photosystem I reaction center II
Length=208

 Score =  142 bits (359),  Expect = 3e-34
 Identities = 83/111 (74%), Positives = 87/111 (78%), Gaps = 1/111 (0%)
 Frame = +2

Query  29   SFVTLPSFKSQKFAPRTIkaeaaeekaetatkeaPVGFTPPELDPSTPSPIFAGSTGGLL  208
            SF T    KS     R I+A A E  A T  K AP GFTPP+LDP+TPSPIF GSTGGLL
Sbjct  30   SFSTPKQLKSTVSVTRPIRAMAEEAPAATEEKPAPAGFTPPQLDPNTPSPIFGGSTGGLL  89

Query  209  RKAQVEEFYVITWDSPKEQISEMPTXFGAAIMRQGPNLLKLARKEQCLALG  361
            RKAQVEEFYVITW+SPKEQI EMPT  GAAIMRQGPNLLKLARKEQCLALG
Sbjct  90   RKAQVEEFYVITWESPKEQIFEMPTG-GAAIMRQGPNLLKLARKEQCLALG  139


>gi|15218708|ref|NP_171812.1|  unknown protein [Arabidopsis thaliana]
 gi|38503234|sp|Q9SA56|PSAD2_ARATH  Photosystem I reaction center subunit II-2, chloroplast precursor 
(Photosystem I 20 kDa subunit 2) (PSI-D2)
 gi|4587564|gb|AAD25795.1|AC006550_3  Strong similarity to gb|X14017 photosystem I reaction centre 
subunit II precursor (psaD) from Spinacia oleracea.  ESTs gb|R30423, 
gb|T42998, gb|Z18178, gb|T14133, gb|N65521, gb|T42498, 
gb|T41918, gb|N38024, gb|R65109, gb|T43849, gb|AA394388, 
gb|T20925 and gb|N65696 come from this gene. [Arabidopsis thaliana]
 gi|11692912|gb|AAG40059.1|AF324708_1  At1g03130 [Arabidopsis thaliana]
 gi|12083234|gb|AAG48776.1|AF332413_1  putative photosystem I reaction center subunit II precursor [Arabidopsis 
thaliana]
 gi|14517460|gb|AAK62620.1|  At1g03130/F10O3_4 [Arabidopsis thaliana]
 gi|21555282|gb|AAM63823.1|  putative photosystem I reaction center subunit II precursor [Arabidopsis 
thaliana]
 gi|23507779|gb|AAN38693.1|  At1g03130/F10O3_4 [Arabidopsis thaliana]
Length=204

 Score =  142 bits (359),  Expect = 3e-34
 Identities = 70/77 (90%), Positives = 74/77 (96%), Gaps = 1/77 (1%)
 Frame = +2

Query  131  PVGFTPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWDSPKEQISEMPTXFGAAIMRQ  310
            PVGFTPP+LDP+TPSPIFAGSTGGLLRKAQVEEFYVITW+SPKEQI EMPT  GAAIMR+
Sbjct  60   PVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIFEMPTG-GAAIMRE  118

Query  311  GPNLLKLARKEQCLALG  361
            GPNLLKLARKEQCLALG
Sbjct  119  GPNLLKLARKEQCLALG  135


>gi|15235503|ref|NP_192186.1|  unknown protein [Arabidopsis thaliana]
 gi|38503230|sp|Q9S7H1|PSAD1_ARATH  Photosystem I reaction center subunit II-1, chloroplast precursor 
(Photosystem I 20 kDa subunit 1) (PSI-D1)
 gi|11692846|gb|AAG40026.1|AF324675_1  AT4g02770 [Arabidopsis thaliana]
 gi|11908080|gb|AAG41469.1|AF326887_1  putative photosystem I reaction center subunit II precursor [Arabidopsis 
thaliana]
 gi|14488084|gb|AAK63862.1|AF389290_1  AT4g02770/T5J8_7 [Arabidopsis thaliana]
 gi|4263525|gb|AAD15351.1|  putative photosystem I reaction center subunit II precursor [Arabidopsis 
thaliana]
 gi|5732199|emb|CAB52676.1|  photosystem I subunit II precursor [Arabidopsis thaliana]
 gi|7269762|emb|CAB77762.1|  putative photosystem I reaction center subunit II precursor [Arabidopsis 
thaliana]
 gi|17064872|gb|AAL32590.1|  Unknown protein [Arabidopsis thaliana]
 gi|20148685|gb|AAM10233.1|  unknown protein [Arabidopsis thaliana]
 gi|20908086|gb|AAM26726.1|  AT4g02770/T5J8_7 [Arabidopsis thaliana]
 gi|21281091|gb|AAM44987.1|  putative photosystem I reaction center subunit II precursor [Arabidopsis 
thaliana]
Length=208

 Score =  142 bits (359),  Expect = 3e-34
 Identities = 70/77 (90%), Positives = 74/77 (96%), Gaps = 1/77 (1%)
 Frame = +2

Query  131  PVGFTPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWDSPKEQISEMPTXFGAAIMRQ  310
            PVGFTPP+LDP+TPSPIFAGSTGGLLRKAQVEEFYVITW+SPKEQI EMPT  GAAIMR+
Sbjct  64   PVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIFEMPTG-GAAIMRE  122

Query  311  GPNLLKLARKEQCLALG  361
            GPNLLKLARKEQCLALG
Sbjct  123  GPNLLKLARKEQCLALG  139


>gi|5732201|emb|CAB52677.1|  photosystem I subunit II precursor [Arabidopsis thaliana]
Length=204

 Score =  142 bits (359),  Expect = 3e-34
 Identities = 70/77 (90%), Positives = 74/77 (96%), Gaps = 1/77 (1%)
 Frame = +2

Query  131  PVGFTPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWDSPKEQISEMPTXFGAAIMRQ  310
            PVGFTPP+LDP+TPSPIFAGSTGGLLRKAQVEEFYVITW+SPKEQI EMPT  GAAIMR+
Sbjct  60   PVGFTPPQLDPNTPSPIFAGSTGGLLRKAQVEEFYVITWNSPKEQIFEMPTG-GAAIMRE  118

Query  311  GPNLLKLARKEQCLALG  361
            GPNLLKLARKEQCLALG
Sbjct  119  GPNLLKLARKEQCLALG  135


>gi|34787117|emb|CAD89270.1|  putative photosystem I reaction centre PSI-D subunit precursor 
[Solanum tuberosum]
Length=207

 Score =  142 bits (358),  Expect = 4e-34
 Identities = 85/122 (69%), Positives = 94/122 (77%), Gaps = 3/122 (2%)
 Frame = +2

Query  2    RNSARGKQA--SFVTLPSFKSQKFAPRTIkaeaaeekaetatkeaPVGFTPPELDPSTPS  175
            +++A  KQ+  SF T    KS     R I+A A E  A T  K AP GFTPP+LDP+TPS
Sbjct  18   KSTAPWKQSLLSFSTPKQLKSTVSVTRPIRAMAEEAPAATEEKPAPAGFTPPQLDPNTPS  77

Query  176  PIFAGSTGGLLRKAQVEEFYVITWDSPKEQISEMPTXFGAAIMRQGPNLLKLARKEQCLA  355
            PIF GSTGGLLRKAQVEEFYVITW+SPKEQI EMPT  GAAIMR+GPNLLKLARKEQCLA
Sbjct  78   PIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTG-GAAIMREGPNLLKLARKEQCLA  136

Query  356  LG  361
            LG
Sbjct  137  LG  138


>gi|417544|sp|P32869|PSAD_CUCSA  Photosystem I reaction center subunit II, chloroplast precursor 
(Photosystem I 20 kDa subunit) (PSI-D) (PS I subunit 5)
 gi|227772|prf||1710320A  photosystem I 20kD protein
Length=207

 Score =  142 bits (358),  Expect = 4e-34
 Identities = 70/77 (90%), Positives = 73/77 (94%), Gaps = 1/77 (1%)
 Frame = +2

Query  131  PVGFTPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWDSPKEQISEMPTXFGAAIMRQ  310
            P GF+PPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITW+SPKEQI EMPT  GAAIMR+
Sbjct  63   PAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTG-GAAIMRE  121

Query  311  GPNLLKLARKEQCLALG  361
            GPNLLKLARKEQCLALG
Sbjct  122  GPNLLKLARKEQCLALG  138


>gi|21293|emb|CAA68728.1|  unnamed protein product [Spinacia oleracea]
Length=212

 Score =  142 bits (357),  Expect = 5e-34
 Identities = 70/77 (90%), Positives = 73/77 (94%), Gaps = 1/77 (1%)
 Frame = +2

Query  131  PVGFTPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWDSPKEQISEMPTXFGAAIMRQ  310
            P GFTPPELDP+TPSPIFAGSTGGLLRKAQVEEFYVITW+SPKEQI EMPT  GAAIMR+
Sbjct  68   PKGFTPPELDPNTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTG-GAAIMRE  126

Query  311  GPNLLKLARKEQCLALG  361
            GPNLLKLARKEQCLALG
Sbjct  127  GPNLLKLARKEQCLALG  143


>gi|21289|emb|CAA32182.1|  unnamed protein product [Spinacia oleracea]
Length=212

 Score =  142 bits (357),  Expect = 5e-34
 Identities = 70/77 (90%), Positives = 73/77 (94%), Gaps = 1/77 (1%)
 Frame = +2

Query  131  PVGFTPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWDSPKEQISEMPTXFGAAIMRQ  310
            P GFTPPELDP+TPSPIFAGSTGGLLRKAQVEEFYVITW+SPKEQI EMPT  GAAIMR+
Sbjct  68   PKGFTPPELDPNTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTG-GAAIMRE  126

Query  311  GPNLLKLARKEQCLALG  361
            GPNLLKLARKEQCLALG
Sbjct  127  GPNLLKLARKEQCLALG  143


>gi|19855891|sp|P12353|PSAD_SPIOL  Photosystem I reaction center subunit II, chloroplast precursor 
(Photosystem I 20 kDa subunit) (PSI-D)
Length=212

 Score =  142 bits (357),  Expect = 5e-34
 Identities = 70/77 (90%), Positives = 73/77 (94%), Gaps = 1/77 (1%)
 Frame = +2

Query  131  PVGFTPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWDSPKEQISEMPTXFGAAIMRQ  310
            P GFTPPELDP+TPSPIFAGSTGGLLRKAQVEEFYVITW+SPKEQI EMPT  GAAIMR+
Sbjct  68   PKGFTPPELDPNTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTG-GAAIMRE  126

Query  311  GPNLLKLARKEQCLALG  361
            GPNLLKLARKEQCLALG
Sbjct  127  GPNLLKLARKEQCLALG  143


>gi|407769|dbj|BAA02871.1|  PSI-D1 precursor [Nicotiana sylvestris]
Length=214

 Score =  141 bits (356),  Expect = 6e-34
 Identities = 69/77 (89%), Positives = 73/77 (94%), Gaps = 1/77 (1%)
 Frame = +2

Query  131  PVGFTPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWDSPKEQISEMPTXFGAAIMRQ  310
            PVGFTPP+LDPSTPSPIF GSTGGLLRKAQV+EFYVITW+SPKEQI EMPT  GAAIMR+
Sbjct  70   PVGFTPPQLDPSTPSPIFGGSTGGLLRKAQVDEFYVITWESPKEQIFEMPTG-GAAIMRE  128

Query  311  GPNLLKLARKEQCLALG  361
            GPNLLKLARKEQCLALG
Sbjct  129  GPNLLKLARKEQCLALG  145


>gi|131167|sp|P29302|PSAD_NICSY  Photosystem I reaction center subunit II, chloroplast precursor 
(Photosystem I 20 kDa subunit) (PSI-D)
 gi|19748|emb|CAA42623.1|  PSI-D2 [Nicotiana sylvestris]
Length=204

 Score =  138 bits (348),  Expect = 5e-33
 Identities = 68/77 (88%), Positives = 72/77 (93%), Gaps = 1/77 (1%)
 Frame = +2

Query  131  PVGFTPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWDSPKEQISEMPTXFGAAIMRQ  310
            PVGFTPP+LDP+TPSPIF GSTGGLLRKAQVEEFYVITW+SPKEQI EMPT  GAAIMR+
Sbjct  60   PVGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTG-GAAIMRE  118

Query  311  GPNLLKLARKEQCLALG  361
            G NLLKLARKEQCLALG
Sbjct  119  GANLLKLARKEQCLALG  135


>gi|548603|sp|P36213|PSAD_HORVU  Photosystem I reaction center subunit II, chloroplast precursor 
(Photosystem I 20 kDa subunit) (PSI-D)
 gi|167085|gb|AAA18567.1|  PSI-D subunit
Length=205

 Score =  137 bits (346),  Expect = 9e-33
 Identities = 67/77 (87%), Positives = 70/77 (90%), Gaps = 1/77 (1%)
 Frame = +2

Query  131  PVGFTPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWDSPKEQISEMPTXFGAAIMRQ  310
            P GF PP+LDPSTPSPIF GSTGGLLRKAQVEEFYVITW SPKEQ+ EMPT  GAAIMR+
Sbjct  61   PAGFVPPQLDPSTPSPIFGGSTGGLLRKAQVEEFYVITWTSPKEQVFEMPTG-GAAIMRE  119

Query  311  GPNLLKLARKEQCLALG  361
            GPNLLKLARKEQCLALG
Sbjct  120  GPNLLKLARKEQCLALG  136


>gi|115477831|ref|NP_001062511.1|  Os08g0560900 [Oryza sativa (japonica cultivar-group)]
 gi|29367391|gb|AAO72568.1|  chloroplast photosystem I reaction center subunit II precursor-like 
protein [Oryza sativa (japonica cultivar-group)]
 gi|45736168|dbj|BAD13214.1|  putative photosystem I reaction center subunit II, chloroplast 
precursor (Photosystem I 20 kDa subunit) (PSI-D) [Oryza sativa 
(japonica cultivar-group)]
 gi|113624480|dbj|BAF24425.1|  Os08g0560900 [Oryza sativa (japonica cultivar-group)]
Length=203

 Score =  136 bits (343),  Expect = 2e-32
 Identities = 66/77 (85%), Positives = 70/77 (90%), Gaps = 1/77 (1%)
 Frame = +2

Query  131  PVGFTPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWDSPKEQISEMPTXFGAAIMRQ  310
            P GF PP+LDP+TPSPIF GSTGGLLRKAQVEEFYVITW SPKEQ+ EMPT  GAAIMR+
Sbjct  59   PAGFVPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWTSPKEQVFEMPTG-GAAIMRE  117

Query  311  GPNLLKLARKEQCLALG  361
            GPNLLKLARKEQCLALG
Sbjct  118  GPNLLKLARKEQCLALG  134


>gi|1488649|emb|CAA54744.1|  psaD [Spinacia oleracea]
Length=211

 Score =  130 bits (328),  Expect = 1e-30
 Identities = 67/74 (90%), Positives = 70/74 (94%), Gaps = 2/74 (2%)
 Frame = +2

Query  140  FTPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWDSPKEQISEMPTXFGAAIMRQGPN  319
            FTPPELDP+TPSPIFAGSTG LLRKAQVEEFYVITW+SPKEQI EMPT  GAAIMR+GPN
Sbjct  71   FTPPELDPNTPSPIFAGSTG-LLRKAQVEEFYVITWESPKEQIFEMPTG-GAAIMREGPN  128

Query  320  LLKLARKEQCLALG  361
            LLKLARKEQCLALG
Sbjct  129  LLKLARKEQCLALG  142


>gi|2499965|sp|Q39615|PSAD_CHLRE  Photosystem I reaction center subunit II, chloroplast precursor 
(Photosystem I 20 kDa subunit) (PSI-D)
 gi|18478582|gb|AAL73208.1|AF335592_1  photosystem I subunit [Chlamydomonas reinhardtii]
 gi|498824|emb|CAA56122.1|  psaD [Chlamydomonas reinhardtii]
 gi|1644293|emb|CAA52440.1|  PSI reaction center, subunit II [Chlamydomonas reinhardtii]
Length=196

 Score =  115 bits (287),  Expect = 6e-26
 Identities = 57/73 (78%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
 Frame = +2

Query  140  FTPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWDSPKEQISEMPTXFGAAIMRQGPN  319
            +T P L+P TPSPIF GSTGGLLRKAQ EEFYVITW++ KEQI EMPT  GAAIMRQGPN
Sbjct  53   WTVPTLNPDTPSPIFGGSTGGLLRKAQTEEFYVITWEAKKEQIFEMPTG-GAAIMRQGPN  111

Query  320  LLKLARKEQCLAL  358
            LLK  +KEQCLAL
Sbjct  112  LLKFGKKEQCLAL  124


>gi|110681492|emb|CAL25356.1|  photosystem I reaction center subunit II [Platanus x acerifolia]
Length=122

 Score = 99.8 bits (247),  Expect = 3e-21
 Identities = 51/54 (94%), Positives = 51/54 (94%), Gaps = 1/54 (1%)
 Frame = +2

Query  200  GLLRKAQVEEFYVITWDSPKEQISEMPTXFGAAIMRQGPNLLKLARKEQCLALG  361
            GLLRKAQVEEFYVITWDSPKEQI EMPT  GAAIMRQGPNLLKLARKEQCLALG
Sbjct  1    GLLRKAQVEEFYVITWDSPKEQIFEMPTG-GAAIMRQGPNLLKLARKEQCLALG  53


>gi|68565661|sp|P84563|PSAD_POPEU  Photosystem I reaction center subunit II (Photosystem I 20 kDa 
subunit) (PSI-D)
Length=29

 Score = 58.9 bits (141),  Expect = 5e-09
 Identities = 26/27 (96%), Positives = 26/27 (96%), Gaps = 0/27 (0%)
 Frame = +2

Query  131  PVGFTPPELDPSTPSPIFAGSTGGLLR  211
            PVGFTPPELDPSTPSPIF GSTGGLLR
Sbjct  3    PVGFTPPELDPSTPSPIFGGSTGGLLR  29


>gi|116055302|emb|CAL57698.1|  PSI reaction center, subunit II (ISS) [Ostreococcus tauri]
Length=82

 Score = 53.1 bits (126),  Expect = 3e-07
 Identities = 24/31 (77%), Positives = 27/31 (87%), Gaps = 0/31 (0%)
 Frame = +2

Query  131  PVGFTPPELDPSTPSPIFAGSTGGLLRKAQV  223
            P  +T P+LDP+TPSPIF GSTGGLLRKAQV
Sbjct  46   PAVWTAPKLDPNTPSPIFGGSTGGLLRKAQV  76


>gi|7677044|gb|AAF67002.1|AF147726_1  ferredoxin-binding subunit [Zea mays]
Length=108

 Score = 46.2 bits (108),  Expect = 3e-05
 Identities = 21/23 (91%), Positives = 23/23 (100%), Gaps = 0/23 (0%)
 Frame = +2

Query  293  AAIMRQGPNLLKLARKEQCLALG  361
            +AIMR+GPNLLKLARKEQCLALG
Sbjct  18   SAIMREGPNLLKLARKEQCLALG  40


>gi|1916314|gb|AAB51150.1|  subunit II of photosystem I [Picea abies]
Length=102

 Score = 45.8 bits (107),  Expect = 4e-05
 Identities = 21/22 (95%), Positives = 22/22 (100%), Gaps = 0/22 (0%)
 Frame = +2

Query  296  AIMRQGPNLLKLARKEQCLALG  361
            AIMR+GPNLLKLARKEQCLALG
Sbjct  1    AIMREGPNLLKLARKEQCLALG  22


>gi|544747|gb|AAB29525.1|  PSI-D2=18.5 kda photosystem I psaD product {N-terminal} [Nicotiana 
tabacum, leaves, Peptide Chloroplast Partial, 34 aa]
Length=34

 Score = 40.4 bits (93),  Expect = 0.002
 Identities = 16/20 (80%), Positives = 18/20 (90%), Gaps = 0/20 (0%)
 Frame = +2

Query  131  PVGFTPPELDPSTPSPIFAG  190
            PVGFTPP+LDP+TPS IF G
Sbjct  15   PVGFTPPQLDPNTPSXIFGG  34


>gi|478509|pir||PQ0669  photosystem I 17.5K D2 chain - common tobacco (fragment)
 gi|544746|gb|AAB29524.1|  PSI-D2=17.5 kda photosystem I psaD product {N-terminal} [Nicotiana 
sylvestris, leaves, Peptide Chloroplast Partial, 30 aa]
Length=30

 Score = 38.1 bits (87),  Expect = 0.009
 Identities = 15/18 (83%), Positives = 17/18 (94%), Gaps = 0/18 (0%)
 Frame = +2

Query  131  PVGFTPPELDPSTPSPIF  184
            PVGFTPP+LDP+TPS IF
Sbjct  12   PVGFTPPQLDPNTPSXIF  29


>gi|131168|sp|P20117|PSAD_PEA  Photosystem I reaction center subunit II (Photosystem I 21 kDa 
subunit) (PSI-D)
Length=36

 Score = 33.1 bits (74),  Expect = 0.30
 Identities = 14/18 (77%), Positives = 15/18 (83%), Gaps = 0/18 (0%)
 Frame = +2

Query  131  PVGFTPPELDPSTPSPIF  184
            PVGFTP ELDP+T S IF
Sbjct  18   PVGFTPXELDPNTXSXIF  35


>gi|14549150|gb|AAK08984.1|  glycine-rich protein LeGRP1 [Lycopersicon esculentum]
Length=284

 Score = 29.3 bits (64),  Expect = 4.4
 Identities = 9/19 (47%), Positives = 11/19 (57%), Gaps = 0/19 (0%)
 Frame = -1

Query  196  GAASKYW*WGTWVQLWWGE  140
            G   ++W W TW  LWW E
Sbjct  3    GEVRRWWWWWTWRWLWWWE  21


>gi|51849615|dbj|BAD42337.1|  trypsin [Nannochloris bacillaris]
Length=299

 Score = 28.9 bits (63),  Expect = 5.7
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 0/46 (0%)
 Frame = +2

Query  170  PSPIFAGSTGGLLRKAQVEEFYVITWDSPKEQISEMPTXFGAAIMR  307
            PS    G  G + +   V EF +  + +PK+  S   T FG  +++
Sbjct  128  PSASRGGDIGWIQKGRTVREFEIAAYSTPKDSFSTCTTKFGVHLIQ  173


>gi|11527515|dbj|BAB18656.1|  maturase [Blyxa japonica]
Length=435

 Score = 28.9 bits (63),  Expect = 5.7
 Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 0/32 (0%)
 Frame = +3

Query  183  LLAAPAGCYVRHK*KSFM*SLGTHPRNKYLKC  278
            L   P   YVR+K KS + S GTH R K  KC
Sbjct  203  LFEDPCMHYVRYKGKSILASKGTHLRVKKWKC  234


>gi|282834|pir||S23300  photosystem I chain II precursor - spinach
Length=46

 Score = 28.1 bits (61),  Expect = 9.7
 Identities = 15/22 (68%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
 Frame = +2

Query  257  KEQISEMPTXFGAAIMRQGPNL  322
            KE    MPT  GAAIMR+GPNL
Sbjct  15   KEAPKGMPTG-GAAIMREGPNL  35

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 210
Number of extensions: 1
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 361
Length of database: 101054579
Length adjustment: 87
Effective length of query: 274
Effective length of database: 76403216
Effective search space: 2521306128
Effective search space used: 2521306128
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 61 (28.1 bits)