Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168941459-1863-198200000685.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig178 Length=377
Score E Sequences producing significant alignments: (Bits) Value gi|38699518|gb|AAR27068.1| actin 1 [Ficus carica] 230 1e-60 gi|112280267|gb|ABI14668.1| actin [Aegiceras corniculatum] 228 4e-60 gi|1531672|gb|AAC49651.1| actin [Striga asiatica] 228 4e-60 gi|15231447|ref|NP_190236.1| ACT12 (ACTIN-12); structural con... 228 4e-60 gi|1531674|gb|AAC49652.1| actin [Striga asiatica] 228 6e-60 gi|1498338|gb|AAB40081.1| actin [Glycine max] 228 6e-60 gi|111610548|gb|ABH11670.1| actin [Linum usitatissimum] 227 8e-60 gi|60223034|dbj|BAD90031.1| actin [Chrysanthemum x morifolium] 227 8e-60 gi|73254858|gb|AAZ74665.1| actin [Cucumis sativus] 227 8e-60 gi|73254855|gb|AAZ74664.1| actin [Cucumis sativus] 227 8e-60 gi|83423376|emb|CAJ44725.1| actin [Capsicum chinense] 227 8e-60 gi|3219760|sp|P93371|ACT5_TOBAC Actin-93 >gi|1498348|gb|AAB40086 227 8e-60 gi|28393806|gb|AAO42312.1| putative actin 4 [Arabidopsis thalian 227 1e-59 gi|231496|sp|P30167|ACT3_SOLTU Actin-58 >gi|21536|emb|CAA39278.1 227 1e-59 gi|15238387|ref|NP_200745.1| ACT4 (ACTIN 4) [Arabidopsis thal... 227 1e-59 gi|3219758|sp|P81228|ACT5_SOLTU Actin-66 >gi|1498374|gb|AAB40098 226 1e-59 gi|3219766|sp|P93584|ACT9_SOLTU Actin-82 >gi|1498370|gb|AAB40096 226 1e-59 gi|1498330|gb|AAB40077.1| actin [Glycine max] 226 2e-59 gi|461465|sp|Q05214|ACT1_TOBAC Actin >gi|22609|emb|CAA45149.1| a 226 2e-59 gi|110084291|gb|ABG49391.1| actin 1 [Torenia fournieri] 226 2e-59 gi|55820068|gb|AAT72934.2| stem cambial region actin protein [Eu 225 3e-59 gi|2944389|gb|AAC05272.1| actin 4 [Glycine max] 225 3e-59 gi|54035683|sp|O81221|ACT_GOSHI Actin >gi|3420239|gb|AAC31886.1| 225 3e-59 gi|62149366|dbj|BAD93483.1| putative actin [Agapanthus praecox] 225 4e-59 gi|18252329|gb|AAL66196.1|AF386514_1 actin [Pyrus communis] 225 4e-59 gi|23092520|gb|AAN08622.1| actin [Phalaenopsis hybrid cultivar] 225 4e-59 gi|7960245|gb|AAF71264.1|AF246714_1 actin-like protein [Phalaeno 225 4e-59 gi|21593690|gb|AAM65657.1| actin 4 [Arabidopsis thaliana] 225 4e-59 gi|34392646|dbj|BAC82632.1| actin [Costus speciosus] 225 4e-59 gi|12382765|gb|AAG53398.1|AF321852_1 actin [Prunus salicina] 224 5e-59 gi|1498328|gb|AAB40076.1| actin [Glycine max] 224 5e-59 gi|9965319|gb|AAG10041.1|AF288226_1 actin [Setaria italica] 224 5e-59 gi|1498326|gb|AAB40075.1| actin [Glycine max] 224 5e-59 gi|81076210|gb|ABB55389.1| actin-like [Solanum tuberosum] 224 5e-59 gi|231503|sp|P30171|ACT11_SOLTU Actin-97 >gi|21544|emb|CAA39280. 224 5e-59 gi|6683506|dbj|BAA89215.1| actin isoform C [Mimosa pudica] 224 5e-59 gi|115454971|ref|NP_001051086.1| Os03g0718100 [Oryza sativa (... 224 5e-59 gi|34392648|dbj|BAC82633.1| actin [Costus speciosus] 224 7e-59 gi|3219759|sp|P81229|ACT8_SOLTU Actin-79 >gi|1498372|gb|AAB40097 224 7e-59 gi|6934188|gb|AAF31643.1|AF143208_1 actin [Vigna radiata] 224 9e-59 gi|7960247|gb|AAF71265.1|AF246715_1 actin-like protein [Phalaeno 224 9e-59 gi|1498344|gb|AAB40084.1| actin [Glycine max] 224 9e-59 gi|33438224|dbj|BAC81527.1| actin [Asparagus officinalis] 224 9e-59 gi|33355921|gb|AAQ16309.1| actin [Vicia faba] 223 1e-58 gi|1666232|gb|AAB18643.1| actin [Pisum sativum] >gi|1724141|g... 223 1e-58 gi|1666228|gb|AAB18641.1| actin [Pisum sativum] >gi|1666230|g... 223 1e-58 gi|231505|sp|P30173|ACT13_SOLTU Actin-101 >gi|21534|emb|CAA39281 223 1e-58 gi|1168324|sp|P46258|ACT3_PEA Actin-3 >gi|940813|emb|CAA62028.1| 223 1e-58 gi|231504|sp|P30172|ACT12_SOLTU Actin-100 >gi|1345579|emb|CAA392 223 1e-58 gi|37694729|gb|AAQ99275.1| actin-like protein [Triticum aestivum 223 2e-58 gi|30039647|gb|AAP12544.1| actin [Zea mays] 223 2e-58 gi|1498384|gb|AAB40103.1| actin [Zea mays] 223 2e-58 gi|2253219|gb|AAB62881.1| actin 2 [Podocarpus macrophyllus] 223 2e-58 gi|3219773|sp|Q96484|ACT3_LYCES Actin-52 >gi|1498368|gb|AAB40... 223 2e-58 gi|295885|emb|CAA33874.1| actin [Oryza sativa (indica cultivar-g 222 3e-58 gi|1498346|gb|AAB40085.1| actin [Glycine max] 222 3e-58 gi|6683502|dbj|BAA89213.1| actin isoform A [Mimosa pudica] 222 3e-58 gi|1703107|sp|P53504|ACT1_SORBI Actin-1 >gi|499012|emb|CAA55923. 222 3e-58 gi|7211789|gb|AAF40438.1|AF234528_2 actin 1 [Avena nuda] 222 3e-58 gi|68299601|dbj|BAE02827.1| actin [Diospyros kaki] 222 3e-58 gi|114148912|gb|ABI51282.1| actin [Hibiscus cannabinus] 221 4e-58 gi|57118119|gb|AAW34192.1| actin [Linum usitatissimum] 221 4e-58 gi|53759189|gb|AAU93346.1| actin [Saccharum officinarum] 221 4e-58 gi|5230841|gb|AAD41039.1|AF112538_1 actin [Malva pusilla] 221 4e-58 gi|23955912|gb|AAN40685.1| actin [Stevia rebaudiana] 221 4e-58 gi|59800134|gb|AAX07420.1| actin 2 [Musa acuminata] 221 4e-58 gi|32186916|gb|AAP73462.1| actin [Gossypium hirsutum] 221 4e-58 gi|32186906|gb|AAP73457.1| actin [Gossypium hirsutum] 221 4e-58 gi|32186900|gb|AAP73454.1| actin [Gossypium hirsutum] 221 4e-58 gi|115456443|ref|NP_001051822.1| Os03g0836000 [Oryza sativa (... 221 4e-58 gi|6683504|dbj|BAA89214.1| actin isoform B [Mimosa pudica] 221 4e-58 gi|115482882|ref|NP_001065034.1| Os10g0510000 [Oryza sativa (... 221 4e-58 gi|116812230|dbj|BAF36000.1| actin [Rosa hybrid cultivar] 221 6e-58 gi|110612122|gb|ABG78035.1| actin [Morus alba] 221 6e-58 gi|110086028|gb|ABG49457.1| actin 1 [Boehmeria nivea] 221 6e-58 gi|110084293|gb|ABG49392.1| actin 2 [Torenia fournieri] 221 6e-58 gi|115461639|ref|NP_001054419.1| Os05g0106600 [Oryza sativa (... 221 6e-58 gi|50660331|gb|AAT80890.1| actin 1 [Vitis vinifera] 221 6e-58 gi|37650549|emb|CAE51207.1| putative actin [Lolium multiflorum] 221 6e-58 gi|14133881|gb|AAK54159.1|AF369525_1 actin 2 [Vitis vinifera] 221 6e-58 gi|14133878|gb|AAK54158.1|AF369524_1 actin 1 [Vitis vinifera] 221 6e-58 gi|32186910|gb|AAP73459.1| actin [Gossypium hirsutum] 221 6e-58 gi|32186912|gb|AAP73460.1| actin [Gossypium hirsutum] 221 6e-58 gi|32186892|gb|AAP73450.1| actin [Gossypium hirsutum] 221 6e-58 gi|32186908|gb|AAP73458.1| actin [Gossypium hirsutum] 221 6e-58 gi|32186890|gb|AAP73449.1| actin [Gossypium hirsutum] 221 6e-58 gi|32186896|gb|AAP73452.1| actin [Gossypium hirsutum] 221 6e-58 gi|6103623|gb|AAF03692.1|AF172094_1 actin [Picea rubens] 221 6e-58 gi|3746942|gb|AAC64129.1| actin 1 [Psilotum nudum] 221 6e-58 gi|115484337|ref|NP_001065830.1| Os11g0163100 [Oryza sativa (... 221 6e-58 gi|24496452|gb|AAN59956.1| actin [Hordeum vulgare] >gi|585331... 221 6e-58 gi|20197249|gb|AAC23632.2| actin 3 [Arabidopsis thaliana] 221 8e-58 gi|15076949|gb|AAK82991.1|AF285176_1 actin [Musa x paradisiaca] 221 8e-58 gi|166582|gb|AAA32727.1| actin-1 >gi|1145693|gb|AAA98561.1| acti 221 8e-58 gi|73254861|gb|AAZ74666.1| actin [Cucumis sativus] 221 8e-58 gi|37665593|dbj|BAC99043.1| actin [Phyllostachys pubescens] 221 8e-58 gi|2887459|dbj|BAA24865.1| actin [Cucumis sativus] 221 8e-58 gi|18409908|ref|NP_566988.1| ACT3; structural constituent of ... 221 8e-58 gi|11276980|pir||T45915 actin (ACT3) - Arabidopsis thaliana >... 221 8e-58 gi|32186894|gb|AAP73451.1| actin [Gossypium hirsutum] 220 1e-57
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.315 0.133 0.361 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 296 Number of extensions: 7 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 377 Length of database: 101054579 Length adjustment: 92 Effective length of query: 285 Effective length of database: 74986471 Effective search space: 2474553543 Effective search space used: 2474553543 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)