Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168941462-2089-171337058263.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig179 Length=429
Score E Sequences producing significant alignments: (Bits) Value gi|119952178|dbj|BAA96365.3| oxygen evolving enhancer protein... 177 9e-45 gi|30013657|gb|AAP03871.1| oxygen evolving complex 33 kDa pho... 174 8e-44 gi|61697115|gb|AAX53163.1| chloroplast photosynthetic oxygen-... 174 8e-44 gi|809113|emb|CAA35601.1| 33kDa precursor protein of oxygen-e... 171 1e-42 gi|131385|sp|P26320|PSBO_SOLTU Oxygen-evolving enhancer prote... 171 1e-42 gi|11134054|sp|Q40459|PSBO_TOBAC Oxygen-evolving enhancer pro... 170 1e-42 gi|12644171|sp|P23322|PSBO_LYCES Oxygen-evolving enhancer pro... 165 6e-41 gi|108951293|gb|ABG25040.1| 33kDa precursor protein of oxygen... 155 5e-38 gi|108951295|gb|ABG25041.1| 33kDa precursor protein of oxygen... 155 6e-38 gi|45181461|gb|AAS55410.1| photosystem II protein; PsbO [Brassic 154 1e-37 gi|49359169|gb|AAT65501.1| photosystem II protein [Brassica oler 153 2e-37 gi|5052366|gb|AAD38521.1|AF139818_1 33 kDa oxygen evolving pr... 153 2e-37 gi|131384|sp|P14226|PSBO_PEA Oxygen-evolving enhancer protein... 153 2e-37 gi|15230324|ref|NP_190651.1| PSBO-2/PSBO2; oxygen evolving [A... 151 9e-37 gi|15451006|gb|AAK96774.1| 33 kDa polypeptide of oxygen-evolv... 150 1e-36 gi|13926291|gb|AAK49614.1|AF372898_1 AT5g66570/K1F13_25 [Arabido 150 1e-36 gi|21593220|gb|AAM65169.1| 33 kDa polypeptide of oxygen-evolv... 150 1e-36 gi|15240013|ref|NP_201458.1| PSBO-1 (OXYGEN-EVOLVING ENHANCER... 150 1e-36 gi|15912247|gb|AAL08257.1| AT5g66570/K1F13_25 [Arabidopsis thali 149 3e-36 gi|22530906|gb|AAM96957.1| 33 kDa polypeptide of oxygen-evolv... 149 4e-36 gi|11133881|sp|O49079|PSBO_FRIAG Oxygen-evolving enhancer pro... 148 8e-36 gi|22571|emb|CAA36675.1| 33 kDa oxygen-evolving protein [Arabido 145 6e-35 gi|131386|sp|P12359|PSBO_SPIOL Oxygen-evolving enhancer prote... 142 5e-34 gi|81478|pir||S00415 photosystem II oxygen-evolving complex p... 142 5e-34 gi|131388|sp|P27665|PSBO_WHEAT Oxygen-evolving enhancer prote... 136 3e-32 gi|115436780|ref|NP_001043134.1| Os01g0501800 [Oryza sativa (... 134 1e-31 gi|32363253|sp|P83504|PSBO_BRARA Oxygen-evolving enhancer protei 65.5 6e-11 gi|739292|prf||2002393A oxygen-evolving complex protein 1 64.3 1e-10 gi|224916|prf||1204192A photosystem II protein 33kD 57.4 2e-08 gi|11134152|sp|Q9SBN6|PSBO_VOLCA Oxygen-evolving enhancer pro... 55.5 7e-08 gi|74272687|gb|ABA01139.1| chloroplast oxygen-evolving enhanc... 45.4 7e-05 gi|131382|sp|P12853|PSBO_CHLRE Oxygen-evolving enhancer prote... 45.4 7e-05 gi|116054689|emb|CAL56766.1| unnamed protein product [Ostreococc 40.8 0.002 gi|15230098|ref|NP_189077.1| ATP binding / ATP-dependent heli... 32.3 0.60 gi|15222106|ref|NP_175358.1| unknown protein [Arabidopsis tha... 30.4 2.3 gi|115447029|ref|NP_001047294.1| Os02g0592500 [Oryza sativa (... 30.0 3.0 gi|115452957|ref|NP_001050079.1| Os03g0343700 [Oryza sativa (... 29.3 5.1 gi|116058364|emb|CAL53553.1| unnamed protein product [Ostreococc 28.9 6.7 gi|40806500|gb|AAR92155.1| putative cysteine protease 2 [Iris ho 28.5 8.7
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 247 Number of extensions: 2 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 429 Length of database: 101054579 Length adjustment: 102 Effective length of query: 327 Effective length of database: 72152981 Effective search space: 2958272221 Effective search space used: 2958272221 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 62 (28.5 bits)