Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168929293-26201-4627661007.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig18 Length=648
Score E Sequences producing significant alignments: (Bits) Value gi|76160927|gb|ABA40427.1| unknown [Solanum tuberosum] >gi|77... 114 1e-41 gi|48209911|gb|AAT40505.1| Elongation factor 1-beta' , putative 113 2e-41 gi|15239877|ref|NP_196772.1| translation elongation factor [A... 114 3e-41 gi|76161000|gb|ABA40463.1| elongation factor-like protein [Solan 114 3e-41 gi|30687350|ref|NP_568375.2| translation elongation factor [A... 108 2e-39 gi|115473889|ref|NP_001060543.1| Os07g0662500 [Oryza sativa (... 104 1e-38 gi|218161|dbj|BAA02253.1| elongation factor 1 beta' [Oryza sa... 104 1e-37 gi|232033|sp|P29546|EF1B_WHEAT Elongation factor 1-beta (EF-1... 100 1e-36 gi|27754711|gb|AAO22799.1| putative elongation factor 1B alph... 86.3 9e-33 gi|90704791|dbj|BAE92290.1| putative elongation factor [Cryptome 89.4 2e-32 gi|6015064|sp|P93447|EF1D_PIMBR Elongation factor 1-delta (EF... 74.7 3e-28 gi|115453465|ref|NP_001050333.1| Os03g0406200 [Oryza sativa (... 73.2 8e-27 gi|7711024|emb|CAB90214.1| putative elongation factor 1 beta ... 72.8 1e-24 gi|6015063|sp|O81918|EF1D_BETVU Elongation factor 1-delta (EF... 65.1 2e-23 gi|38232568|gb|AAR15081.1| translational elongation factor 1 sub 73.6 4e-17 gi|115473331|ref|NP_001060264.1| Os07g0614500 [Oryza sativa (... 73.2 5e-17 gi|21593028|gb|AAM64977.1| putative elongation factor beta-1 [A 70.1 2e-16 gi|15224107|ref|NP_179402.1| translation elongation factor [A... 70.1 2e-16 gi|78191406|gb|ABB29924.1| ripening regulated protein DDTFR10-li 70.1 2e-16 gi|118197456|gb|ABK78691.1| putative elongation factor 1-beta [B 71.2 2e-16 gi|25299531|pir||E86426 probable elongation factor 1-beta [im... 69.7 6e-16 gi|30691619|ref|NP_174314.2| translation elongation factor [A... 69.7 6e-16 gi|12231300|gb|AAG49034.1|AF204787_1 ripening regulated protein 68.6 6e-16 gi|398608|emb|CAA52751.1| elongation factor-1 beta A1 [Arabidops 67.4 3e-15 gi|398606|emb|CAA52752.1| eEF-1beta [Arabidopsis thaliana] 70.1 7e-12 gi|6686823|emb|CAB64731.1| elongation factor 1B alpha-subunit [A 48.1 3e-05 gi|535744|gb|AAA33904.1| ORF 32.7 1e-04 gi|461073|gb|AAB29234.1| elongation factor 1 beta, EF-1 beta ... 45.8 1e-04 gi|92893033|gb|ABE91547.1| Engulfment and cell motility, ELM [Me 30.4 5.8 gi|92873328|gb|ABE81799.1| Glutamyl-tRNA synthetase archae/eu... 29.6 9.9 gi|85719348|gb|ABC75353.1| Glutathione S-transferase, C-termi... 29.6 9.9
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 404 Number of extensions: 3 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 648 Length of database: 101054579 Length adjustment: 109 Effective length of query: 539 Effective length of database: 70169538 Effective search space: 7508140566 Effective search space used: 7508140566 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 65 (29.6 bits)