Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168941475-25780-190232779706.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig180 Length=377
Score E Sequences producing significant alignments: (Bits) Value gi|92870535|gb|ABE79826.1| Ubiquitin-associated [Medicago trunca 149 4e-36 gi|22329848|ref|NP_174230.2| unknown protein [Arabidopsis tha... 147 8e-36 gi|12323523|gb|AAG51735.1|AC068667_14 unknown protein; 25451-205 147 8e-36 gi|12323517|gb|AAG51729.1|AC068667_8 unknown protein; 16040-1118 147 8e-36 gi|22329844|ref|NP_174229.2| unknown protein [Arabidopsis thalia 147 8e-36 gi|18087627|gb|AAL58943.1|AF462857_1 At1g29350/F15D2_27 [Arabido 146 2e-35 gi|115465495|ref|NP_001056347.1| Os05g0566900 [Oryza sativa (... 105 6e-23 gi|55773801|dbj|BAD72339.1| TA9 protein-like [Oryza sativa (j... 101 7e-22 gi|115439017|ref|NP_001043788.1| Os01g0663800 [Oryza sativa (... 101 7e-22 gi|15236766|ref|NP_193549.1| unknown protein [Arabidopsis tha... 75.9 4e-14 gi|115465667|ref|NP_001056433.1| Os05g0581800 [Oryza sativa (... 67.8 1e-11 gi|48475129|gb|AAT44198.1| unknown protein [Oryza sativa (japoni 67.8 1e-11 gi|77554865|gb|ABA97661.1| retrotransposon protein, putative,... 34.7 0.10 gi|3063699|emb|CAA18590.1| putative protein [Arabidopsis thal... 34.3 0.13 gi|68124015|emb|CAJ01915.1| DNA-directed RNA polymerase [Solanum 33.5 0.23 gi|12321185|gb|AAG50687.1|AC079829_20 Pto kinase interactor, put 33.5 0.23 gi|75336811|sp|Q9S740|AGP19_ARATH Lysine-rich arabinogalactan... 33.5 0.23 gi|79352581|ref|NP_173940.2| ATP binding / protein kinase/ pr... 33.5 0.23 gi|15228010|ref|NP_181812.1| PDF1 (PROTODERMAL FACTOR 1) [Ara... 33.5 0.23 gi|22330504|ref|NP_177041.2| AGP19/ATAGP19 [Arabidopsis thaliana 33.5 0.23 gi|57472005|gb|AAW51128.1| minus agglutinin [Chlamydomonas incer 33.1 0.30 gi|41400381|gb|AAS07042.1| minus agglutinin [Chlamydomonas reinh 33.1 0.30 gi|3552013|gb|AAC34889.1| proline-rich protein precursor [Glycin 33.1 0.30 gi|50508930|dbj|BAD31835.1| putative high-affinity potassium ... 33.1 0.30 gi|6691467|dbj|BAA89307.1| AHM1 [Triticum aestivum] 33.1 0.30 gi|92896373|gb|ABE93173.1| Pyridoxal-dependent decarboxylase;... 32.7 0.39 gi|115454845|ref|NP_001051023.1| Os03g0704400 [Oryza sativa (... 32.7 0.39 gi|30140331|emb|CAD89603.1| putative arabinagalactan protein [Lo 32.7 0.39 gi|18087875|gb|AAL59029.1|AC087182_12 hypothetical protein [Oryz 32.7 0.39 gi|22450594|gb|AAM97166.1| putative protein kinase [Oryza sat... 32.7 0.39 gi|8493585|gb|AAF75808.1|AC011000_11 Contains similarity to h... 32.3 0.50 gi|30696783|ref|NP_176485.2| heat shock protein binding / unf... 32.3 0.50 gi|115488946|ref|NP_001066960.1| Os12g0542200 [Oryza sativa (... 32.0 0.66 gi|115473797|ref|NP_001060497.1| Os07g0655500 [Oryza sativa (... 32.0 0.66 gi|15408787|dbj|BAB64183.1| putative flowering-time protein [... 32.0 0.66 gi|8778315|gb|AAF79324.1|AC002304_17 F14J16.29 [Arabidopsis thal 32.0 0.66 gi|535586|gb|AAB41815.1| proline rich protein [Medicago sativa] 32.0 0.66 gi|62733191|gb|AAX95308.1| Ulp1 protease family, C-terminal c... 32.0 0.66 gi|23617110|dbj|BAC20792.1| transcription factor (PWWP domain... 32.0 0.66 gi|115477282|ref|NP_001062237.1| Os08g0516000 [Oryza sativa (... 32.0 0.66 gi|600118|emb|CAA84230.1| extensin-like protein [Zea mays] >g... 32.0 0.66 gi|55168229|gb|AAV44095.1| putative WRKY transcription factor... 31.6 0.86 gi|46394404|tpg|DAA05140.1| TPA: TPA_inf: WRKY transcription ... 31.6 0.86 gi|435039|gb|AAA79360.1| proline-rich cell wall protein 31.6 0.86 gi|15231954|ref|NP_187479.1| unknown protein [Arabidopsis tha... 31.6 0.86 gi|50252437|dbj|BAD28591.1| hypothetical protein [Oryza sativ... 31.6 0.86 gi|119331576|gb|ABL63114.1| DNA-binding protein [Catharanthus ro 31.2 1.1 gi|18423687|ref|NP_568816.1| unknown protein [Arabidopsis tha... 31.2 1.1 gi|18732|emb|CAA36733.1| DNA-directed RNA polymerase [Glycine ma 31.2 1.1 gi|28932861|gb|AAO61142.1| NADH dehydrogenase subunit 4L [Chl... 31.2 1.1 gi|9758272|dbj|BAB08771.1| unnamed protein product [Arabidopsis 31.2 1.1 gi|15237431|ref|NP_199450.1| unknown protein [Arabidopsis tha... 31.2 1.1 gi|29788817|gb|AAP03363.1| hypothetical protein [Oryza sativa (j 30.8 1.5 gi|16494|emb|CAA36735.1| DNA-directed RNA polymerase [Arabidopsi 30.8 1.5 gi|16505|emb|CAA37130.1| RNA polymerase II [Arabidopsis thaliana 30.8 1.5 gi|60678627|gb|AAX33674.1| plus agglutinin [Chlamydomonas incert 30.8 1.5 gi|1256788|gb|AAA96523.1| alpha-gliadin storage protein 30.8 1.5 gi|115482600|ref|NP_001064893.1| Os10g0485000 [Oryza sativa (... 30.8 1.5 gi|15219860|ref|NP_176303.1| unknown protein [Arabidopsis tha... 30.8 1.5 gi|53792378|dbj|BAD53131.1| hypothetical protein [Oryza sativa ( 30.8 1.5 gi|53793331|dbj|BAD54552.1| HGWP repeat containing protein-li... 30.8 1.5 gi|15233338|ref|NP_195305.1| NRPB1 (RNA POLYMERASE II LARGE S... 30.8 1.5 gi|20805144|dbj|BAB92814.1| hypothetical protein [Oryza sativ... 30.8 1.5 gi|57900575|dbj|BAD87027.1| hypothetical protein [Oryza sativa ( 30.4 1.9 gi|115465571|ref|NP_001056385.1| Os05g0573900 [Oryza sativa (... 30.4 1.9 gi|115461797|ref|NP_001054498.1| Os05g0121500 [Oryza sativa (... 30.4 1.9 gi|45454232|gb|AAS65795.1| putative protein kinase [Arabidopsis 30.4 1.9 gi|13129433|gb|AAK13091.1|AC078839_7 Mutator-like transposase... 30.4 1.9 gi|18734|emb|CAA36734.1| DNA-directed RNA polymerase [Glycine ma 30.4 1.9 gi|75216576|sp|Q9ZT17|AGP3_ARATH Classical arabinogalactan pr... 30.4 1.9 gi|77548339|gb|ABA91136.1| transposon protein, putative, CACT... 30.4 1.9 gi|30685319|ref|NP_188574.2| structural constituent of cell wall 30.4 1.9 gi|115468956|ref|NP_001058077.1| Os06g0614300 [Oryza sativa (... 30.4 1.9 gi|115475575|ref|NP_001061384.1| Os08g0256000 [Oryza sativa (... 30.4 1.9 gi|11994465|dbj|BAB02467.1| unnamed protein product [Arabidopsis 30.4 1.9 gi|4996369|dbj|BAA78427.1| polyprotein [Arabidopsis thaliana] 30.4 1.9 gi|115477332|ref|NP_001062262.1| Os08g0519800 [Oryza sativa (... 30.0 2.5 gi|115449201|ref|NP_001048380.1| Os02g0794900 [Oryza sativa (... 30.0 2.5 gi|115439279|ref|NP_001043919.1| Os01g0688600 [Oryza sativa (... 30.0 2.5 gi|14165343|gb|AAK55475.1|AC084295_8 hypothetical protein Os0... 30.0 2.5 gi|9802525|gb|AAF99727.1|AC004557_6 F17L21.7 [Arabidopsis thalia 30.0 2.5 gi|1256793|gb|AAA96525.1| alpha-gliadin storage protein 30.0 2.5 gi|115489110|ref|NP_001067042.1| Os12g0564600 [Oryza sativa (... 30.0 2.5 gi|10140679|gb|AAG13514.1|AC068924_19 mutator-like transposas... 30.0 2.5 gi|47497221|dbj|BAD19266.1| diaphanous homologue-like [Oryza ... 30.0 2.5 gi|42408517|dbj|BAD09696.1| putative pumilio-family RNA-bindi... 30.0 2.5 gi|67464993|sp|P02863|GDA0_WHEAT Alpha/beta-gliadin precursor... 30.0 2.5 gi|30690042|ref|NP_195170.2| ATP binding / kinase/ protein ki... 30.0 2.5 gi|22535682|dbj|BAC10856.1| hypothetical protein [Oryza sativa ( 30.0 2.5 gi|21755|emb|CAA25593.1| unnamed protein product [Triticum aesti 30.0 2.5 gi|3641836|emb|CAA18823.1| putative serine/threonine protein ... 30.0 2.5 gi|115475690|ref|NP_001061441.1| Os08g0280200 [Oryza sativa (... 29.6 3.3 gi|92876169|gb|ABE83889.1| FH protein NFH1 [Medicago truncatula] 29.6 3.3 gi|55295955|dbj|BAD67823.1| hypothetical protein [Oryza sativa ( 29.6 3.3 gi|3924609|gb|AAC79110.1| putative polyprotein of LTR transpo... 29.6 3.3 gi|15232679|ref|NP_190276.1| ATP binding / protein kinase/ pr... 29.6 3.3 gi|115480371|ref|NP_001063779.1| Os09g0535200 [Oryza sativa (... 29.6 3.3 gi|37805990|dbj|BAC99403.1| putative diaphanous 1 [Oryza sati... 29.6 3.3 gi|13676413|dbj|BAB41197.1| hypothetical protein [Glycine max] 29.6 3.3 gi|4996363|dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] 29.6 3.3
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 267 Number of extensions: 6 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 377 Length of database: 101054579 Length adjustment: 92 Effective length of query: 285 Effective length of database: 74986471 Effective search space: 2474553543 Effective search space used: 2474553543 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)