RID=1168942963-13375-6319141097.BLASTQ4, Contig187

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168942963-13375-6319141097.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig187
Length=359

Distribution of 12 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|18396709|ref|NP_564302.1|  unknown protein [Arabidopsis tha...  30.4    0.002 
gi|116000302|emb|CAL49982.1|  Protein disulfide isomerase (pro...  31.6    0.88 
gi|15146318|gb|AAK83642.1|  AT5g66560/K1F13_23 [Arabidopsis th...  30.4    2.0   
gi|15240012|ref|NP_201457.1|  protein binding / signal transducer  30.4    2.0   
gi|92871120|gb|ABE80231.1|  F28L22.6 protein - Arabidopsis thalia  30.0    2.6  
gi|110741444|dbj|BAE98684.1|  hypothetical protein [Arabidopsis t  29.6    3.3  
gi|30687294|ref|NP_194393.3|  unknown protein [Arabidopsis tha...  29.6    3.3   
gi|49659887|gb|AAT68239.1|  glycinin subunit G7 [Glycine max]      28.5    7.5  
gi|76096944|gb|ABA39287.1|  glycinin subunit G7 [Glycine max]      28.5    7.5   
gi|115391949|ref|YP_778537.1|  YCF1 protein [Jasminum nudiflor...  28.1    9.7   
gi|115488668|ref|NP_001066821.1|  Os12g0501100 [Oryza sativa (...  28.1    9.7

Alignments

 

>gi|18396709|ref|NP_564302.1|  unknown protein [Arabidopsis thaliana]
 gi|9795612|gb|AAF98430.1|AC021044_9  Unknown protein [Arabidopsis thaliana]
 gi|21592484|gb|AAM64434.1|  unknown [Arabidopsis thaliana]
 gi|26453002|dbj|BAC43577.1|  unknown protein [Arabidopsis thaliana]
 gi|28973081|gb|AAO63865.1|  unknown protein [Arabidopsis thaliana]
Length=102

 Score = 30.4 bits (67),  Expect(2) = 0.002
 Identities = 13/18 (72%), Positives = 16/18 (88%), Gaps = 0/18 (0%)
 Frame = +1

Query  175  QTGLVSVECQMQEMDLVP  228
            QTGLV VE QMQE++L+P
Sbjct  80   QTGLVQVETQMQELNLLP  97


 Score = 29.6 bits (65),  Expect(2) = 0.002
 Identities = 13/20 (65%), Positives = 16/20 (80%), Gaps = 0/20 (0%)
 Frame = +2

Query  20  TLKTAFLMLGLCLAVMFGLA  79
           TL+ AFL+LGLCLA M  +A
Sbjct  29  TLRFAFLLLGLCLAFMLSVA  48


>gi|116000302|emb|CAL49982.1|  Protein disulfide isomerase (prolyl 4-hydroxylase beta subunit) 
(ISS) [Ostreococcus tauri]
Length=188

 Score = 31.6 bits (70),  Expect = 0.88
 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 0/40 (0%)
 Frame = -3

Query  165  QSRSQKKGDGDEXQGRQHEEXKVESLEENAKPNITARQRP  46
            + R  +KGD    +G QHE   VE     A+ +  A QRP
Sbjct  105  RDRRNQKGDEGGHEGVQHENASVEEAPSGARASAKASQRP  144


>gi|15146318|gb|AAK83642.1|  AT5g66560/K1F13_23 [Arabidopsis thaliana]
 gi|24111403|gb|AAN46836.1|  At5g66560/K1F13_23 [Arabidopsis thaliana]
Length=668

 Score = 30.4 bits (67),  Expect = 2.0
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
 Frame = -3

Query  183  TSLFKKQSRSQKKGDGDEXQG-RQHEEXKVESLEENAKPNITARQRPNIKNAVFSVPRAE  7
            T +  K   + KKG G E +  ++ EE + + +EEN  P+I     P    +   V  A+
Sbjct  65   TVIDPKVEETDKKGKGHEIEDDKEEEEVEEQEIEENGYPHIKLEDFPGSSESFEMV--AK  122

Query  6    FC  1
            FC
Sbjct  123  FC  124


>gi|15240012|ref|NP_201457.1|  protein binding / signal transducer [Arabidopsis thaliana]
Length=668

 Score = 30.4 bits (67),  Expect = 2.0
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
 Frame = -3

Query  183  TSLFKKQSRSQKKGDGDEXQG-RQHEEXKVESLEENAKPNITARQRPNIKNAVFSVPRAE  7
            T +  K   + KKG G E +  ++ EE + + +EEN  P+I     P    +   V  A+
Sbjct  65   TVIDPKVEETDKKGKGHEIEDDKEEEEVEEQEIEENGYPHIKLEDFPGSSESFEMV--AK  122

Query  6    FC  1
            FC
Sbjct  123  FC  124


>gi|92871120|gb|ABE80231.1|  F28L22.6 protein - Arabidopsis thaliana [Medicago truncatula]
Length=271

 Score = 30.0 bits (66),  Expect = 2.6
 Identities = 16/60 (26%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
 Frame = -3

Query  216  HLLHLTFNRNQTSL-FKKQSRSQKKGDGDEXQGRQHEEXKVESLEENAKPNITARQRPNI  40
            H+ H   + +QTS+ F  Q ++  KG  ++   R  ++ +VES +  ++  +   ++PNI
Sbjct  132  HVGHQVASPSQTSIIFSSQPKANPKGQPNDVTLRDGKQLEVESEKPQSEKVVIESEKPNI  191


>gi|110741444|dbj|BAE98684.1|  hypothetical protein [Arabidopsis thaliana]
Length=322

 Score = 29.6 bits (65),  Expect = 3.3
 Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = -3

Query  171  KKQSR-SQKKGDGDEXQGRQHEEXKVESLEENAKPNITARQRP  46
            K++S+ S+K+G G    G+  E+ K E ++++A+P      RP
Sbjct  192  KEESKGSKKRGKGTSSGGKVREKNKTEEVKKDAEPRTPFSDRP  234


>gi|30687294|ref|NP_194393.3|  unknown protein [Arabidopsis thaliana]
 gi|79325273|ref|NP_001031724.1|  unknown protein [Arabidopsis thaliana]
 gi|4938501|emb|CAB43859.1|  putative protein [Arabidopsis thaliana]
 gi|7269515|emb|CAB79518.1|  putative protein [Arabidopsis thaliana]
Length=763

 Score = 29.6 bits (65),  Expect = 3.3
 Identities = 14/43 (32%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
 Frame = -3

Query  171  KKQSR-SQKKGDGDEXQGRQHEEXKVESLEENAKPNITARQRP  46
            K++S+ S+K+G G    G+  E+ K E ++++A+P      RP
Sbjct  277  KEESKGSKKRGKGTSSGGKVREKNKTEEVKKDAEPRTPFSDRP  319


>gi|49659887|gb|AAT68239.1|  glycinin subunit G7 [Glycine max]
Length=536

 Score = 28.5 bits (62),  Expect = 7.5
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = -3

Query  171  KKQSRSQKKGDGDEXQGRQHEEXKVESLEENAKPNITARQRPNI  40
            ++QSRS+++G+  E +G+QH +   E   E  K     R+R N+
Sbjct  308  EEQSRSRERGEWHEHKGQQHGK---EKGRERYKEGGEGRERSNV  348


>gi|76096944|gb|ABA39287.1|  glycinin subunit G7 [Glycine max]
Length=536

 Score = 28.5 bits (62),  Expect = 7.5
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = -3

Query  171  KKQSRSQKKGDGDEXQGRQHEEXKVESLEENAKPNITARQRPNI  40
            ++QSRS+++G+  E +G+QH +   E   E  K     R+R N+
Sbjct  308  EEQSRSRERGEWHEHKGQQHGK---EKGRERYKEGGEGRERSNV  348


>gi|115391949|ref|YP_778537.1|  YCF1 protein [Jasminum nudiflorum]
 gi|115391961|ref|YP_778549.1|  YCF1 protein [Jasminum nudiflorum]
 gi|118574753|sp|Q06R72|YCF1_JASNU  Putative membrane protein ycf1
 gi|110456270|gb|ABG74675.1|  YCF1 protein [Jasminum nudiflorum]
 gi|110456282|gb|ABG74687.1|  YCF1 protein [Jasminum nudiflorum]
Length=1933

 Score = 28.1 bits (61),  Expect = 9.7
 Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 3/98 (3%)
 Frame = -3

Query  294   RKKME--IVNSVYLLLIDYLRRSXWYQVHLLHLTFNRNQTSLFKKQSRSQKKGDGDEXQG  121
             R KME  +   + L    Y  +       LL L  N N+  +     +++KK    E + 
Sbjct  1520  RLKMEANLFPEIVLFYNAYKTQPWLLSSKLLLLNLNNNENEINADNEKNEKKEAKKEAKK  1579

Query  120   RQHEEXKVESLEENAKPNITARQRPNIKNAVFSVPRAE  7
                +E K E  ++N K  +T +     K  + SVP  E
Sbjct  1580  EAKKEAKKEE-KQNIKKELTTKGDLENKGDLESVPSKE  1616


>gi|115488668|ref|NP_001066821.1|  Os12g0501100 [Oryza sativa (japonica cultivar-group)]
 gi|113649328|dbj|BAF29840.1|  Os12g0501100 [Oryza sativa (japonica cultivar-group)]
Length=324

 Score = 28.1 bits (61),  Expect = 9.7
 Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 0/20 (0%)
 Frame = +3

Query  84   PLATLPXILHVAFLXSHHHH  143
            PLA+   +LH A + SHHHH
Sbjct  257  PLASTRRLLHGATVASHHHH  276

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 204
Number of extensions: 2
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 359
Length of database: 101054579
Length adjustment: 86
Effective length of query: 273
Effective length of database: 76686565
Effective search space: 2530656645
Effective search space used: 2530656645
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 61 (28.1 bits)