RID=1168943266-30861-152974206377.BLASTQ1, Contig194

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168943266-30861-152974206377.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig194
Length=350

Distribution of 14 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|115474397|ref|NP_001060795.1|  Os08g0107100 [Oryza sativa (...  48.1    9e-06 
gi|30684945|ref|NP_193728.2|  unknown protein [Arabidopsis tha...  38.9    0.005 
gi|2827649|emb|CAA16603.1|  putative protein [Arabidopsis thal...  38.9    0.005
gi|15241607|ref|NP_199299.1|  unknown protein [Arabidopsis tha...  37.0    0.020 
gi|92889959|gb|ABE90086.1|  conserved hypothetical protein [Medic  36.6    0.027
gi|18397813|ref|NP_564374.1|  unknown protein [Arabidopsis tha...  33.1    0.30  
gi|115460692|ref|NP_001053946.1|  Os04g0626300 [Oryza sativa (...  30.8    1.5   
gi|32483036|emb|CAE01927.1|  OSJNBb0085C12.1 [Oryza sativa (japon  30.8    1.5   
gi|15232437|ref|NP_190984.1|  unknown protein [Arabidopsis tha...  28.9    5.6   
gi|21595125|gb|AAM66074.1|  endosperm-specific protein-like prote  28.5    7.3   
gi|49523817|emb|CAF18249.1|  SEU3A protein [Antirrhinum majus]     28.5    7.3  
gi|49523821|emb|CAF18251.1|  SEU3B protein [Antirrhinum majus]     28.5    7.3  
gi|18406799|ref|NP_566043.1|  FLA8 [Arabidopsis thaliana] >gi|...  28.5    7.3   
gi|92880609|gb|ABE85755.1|  Ribonuclease III [Medicago truncatula  28.1    9.5

Alignments

 

>gi|115474397|ref|NP_001060795.1|  Os08g0107100 [Oryza sativa (japonica cultivar-group)]
 gi|42408231|dbj|BAD09388.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|113622764|dbj|BAF22709.1|  Os08g0107100 [Oryza sativa (japonica cultivar-group)]
Length=337

 Score = 48.1 bits (113),  Expect = 9e-06
 Identities = 31/70 (44%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
 Frame = +3

Query  42   MDREQEELQFLGFFGilkesikiilxsWRKIFSQVTLALIFPLSFIFLAHIQISQLLFTN  221
            M+ E EELQFLG  GI +E+  I+    R +F+++  A + PLS +FL HI IS  LF++
Sbjct  1    MECEPEELQFLGMVGIYREAASILRAH-RPLFARIAAAFVLPLSLLFLLHIAISHALFSH  59

Query  222  ILEKDQDALE  251
            I + D  AL+
Sbjct  60   I-DSDDSALD  68


>gi|30684945|ref|NP_193728.2|  unknown protein [Arabidopsis thaliana]
 gi|50253430|gb|AAT71917.1|  At4g19950 [Arabidopsis thaliana]
 gi|51972070|gb|AAU15139.1|  At4g19950 [Arabidopsis thaliana]
Length=321

 Score = 38.9 bits (89),  Expect = 0.005
 Identities = 38/83 (45%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
 Frame = +3

Query  42   MDREQEELQFLGFFGilkesikiilxsWRKIFSQVTLALIFPLSFIFLAHIQISQLLFTN  221
            MD   EELQFL   GIL+ES  I   S  K F  +TL LIFPLSF  LAH   +Q +   
Sbjct  1    MDLAPEELQFLNKRGILRESTSIPQYSL-KTFYLITLTLIFPLSFAILAHSLFTQPILAQ  59

Query  222  ILEKDQ-DALELYQSW-VFQVYQ  284
            I    Q D  +L   W V  V+Q
Sbjct  60   IDTYPQADQSQLQHEWTVLLVFQ  82


>gi|2827649|emb|CAA16603.1|  putative protein [Arabidopsis thaliana]
 gi|7268790|emb|CAB78995.1|  putative protein [Arabidopsis thaliana]
Length=306

 Score = 38.9 bits (89),  Expect = 0.005
 Identities = 38/83 (45%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
 Frame = +3

Query  42   MDREQEELQFLGFFGilkesikiilxsWRKIFSQVTLALIFPLSFIFLAHIQISQLLFTN  221
            MD   EELQFL   GIL+ES  I   S  K F  +TL LIFPLSF  LAH   +Q +   
Sbjct  1    MDLAPEELQFLNKRGILRESTSIPQYSL-KTFYLITLTLIFPLSFAILAHSLFTQPILAQ  59

Query  222  ILEKDQ-DALELYQSW-VFQVYQ  284
            I    Q D  +L   W V  V+Q
Sbjct  60   IDTYPQADQSQLQHEWTVLLVFQ  82


>gi|15241607|ref|NP_199299.1|  unknown protein [Arabidopsis thaliana]
 gi|2660664|gb|AAC79135.1|  unknown protein [Arabidopsis thaliana]
 gi|10177476|dbj|BAB10867.1|  unnamed protein product [Arabidopsis thaliana]
 gi|21592663|gb|AAM64612.1|  unknown [Arabidopsis thaliana]
 gi|28392933|gb|AAO41902.1|  unknown protein [Arabidopsis thaliana]
 gi|28973591|gb|AAO64120.1|  unknown protein [Arabidopsis thaliana]
Length=321

 Score = 37.0 bits (84),  Expect = 0.020
 Identities = 30/61 (49%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
 Frame = +3

Query  42   MDREQEELQFLGFFGilkesikiilxsWRKIFSQVTLALIFPLSFIFLAHIQISQLLFTN  221
            MD   EELQFL   GIL+ES  I   S  K F  +TL LIFPLSF  LAH   +Q +   
Sbjct  1    MDLAAEELQFLNIQGILRESTTIPKFS-PKTFYLITLTLIFPLSFAILAHSLFTQPILAQ  59

Query  222  I  224
            +
Sbjct  60   L  60


>gi|92889959|gb|ABE90086.1|  conserved hypothetical protein [Medicago truncatula]
Length=320

 Score = 36.6 bits (83),  Expect = 0.027
 Identities = 34/75 (45%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
 Frame = +3

Query  42   MDREQEELQFLGFFGilkesikiilxsWRKIFSQVTLALIFPLSFIFLAHIQISQLLFTN  221
            MD   EELQFL    ILKESI I   S  K F  +TL LIFPLSF  LAH   +  L ++
Sbjct  1    MDLAPEELQFLNIPNILKESISIPKIS-PKTFYLITLILIFPLSFAILAHSLFTHPLISH  59

Query  222  ILEKDQDALELYQSW  266
            I     D  +    W
Sbjct  60   IESPFTDPAQTSHDW  74


>gi|18397813|ref|NP_564374.1|  unknown protein [Arabidopsis thaliana]
 gi|13272451|gb|AAK17164.1|AF325096_1  unknown protein [Arabidopsis thaliana]
 gi|4512625|gb|AAD21694.1|  ESTs gb|T20423, gb|AA712864, gb|H76323 and gb|Z25560 come from 
this gene. [Arabidopsis thaliana]
 gi|19698823|gb|AAL91147.1|  unknown protein [Arabidopsis thaliana]
 gi|21386969|gb|AAM47888.1|  unknown protein [Arabidopsis thaliana]
 gi|21553567|gb|AAM62660.1|  unknown [Arabidopsis thaliana]
Length=321

 Score = 33.1 bits (74),  Expect = 0.30
 Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
 Frame = +3

Query  42   MDREQEELQFLGFFGilkesikiilxsWRKIFSQVTLALIFPLSFIFLAHIQISQLLFTN  221
            MD + EELQFL    +L+ESI I   S R  F  +TL+ IFPLSF  LAH   +Q +   
Sbjct  1    MDLQPEELQFLTIPQLLQESISIKKRSPRT-FYLITLSFIFPLSFAILAHSLFTQPILAK  59

Query  222  ILEKD  236
            + + D
Sbjct  60   LDKSD  64


>gi|115460692|ref|NP_001053946.1|  Os04g0626300 [Oryza sativa (japonica cultivar-group)]
 gi|113565517|dbj|BAF15860.1|  Os04g0626300 [Oryza sativa (japonica cultivar-group)]
Length=171

 Score = 30.8 bits (68),  Expect = 1.5
 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +3

Query  138  SQVTLALIFPLSFIFLAHIQISQLLFTNILEKDQDALE  251
            +++  A + PL  +FL HI IS  LF++I + D  A +
Sbjct  14   ARIAAAFVLPLFLLFLVHIAISHALFSHI-DSDDSAFD  50


>gi|32483036|emb|CAE01927.1|  OSJNBb0085C12.1 [Oryza sativa (japonica cultivar-group)]
Length=1434

 Score = 30.8 bits (68),  Expect = 1.5
 Identities = 14/39 (35%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
 Frame = +2

Query  158   YFPSLFHLPSTHPNLSAPLYKHLGEGPGRLGIIPELGLP  274
             + P+L  LP+   +L++  + H+G+ P R+  +PE+GLP
Sbjct  1372  HLPNLLSLPANLASLTSLKWLHIGDCP-RITRLPEMGLP  1409


>gi|15232437|ref|NP_190984.1|  unknown protein [Arabidopsis thaliana]
 gi|6822062|emb|CAB70990.1|  putative protein [Arabidopsis thaliana]
Length=434

 Score = 28.9 bits (63),  Expect = 5.6
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 0/41 (0%)
 Frame = +1

Query  226  WRRTRTPWNYTRVGSSRYTKLSDILSSEWDCVLGSSKLHIS  348
            +R  R  W ++R+ SS+  K   I   +W+ + GSS   IS
Sbjct  177  YRNNREDWEWSRIVSSKILKKLTIRREDWEDLDGSSYESIS  217


>gi|21595125|gb|AAM66074.1|  endosperm-specific protein-like protein [Arabidopsis thaliana]
Length=420

 Score = 28.5 bits (62),  Expect = 7.3
 Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 0/40 (0%)
 Frame = +2

Query  158  YFPSLFHLPSTHPNLSAPLYKHLGEGPGRLGIIPELGLPG  277
            Y P   H  S    LS  LY+  G  PG LG +    L G
Sbjct  95   YDPQKLHKISKGTTLSTTLYQTTGNAPGNLGFVNITDLKG  134


>gi|49523817|emb|CAF18249.1|  SEU3A protein [Antirrhinum majus]
Length=901

 Score = 28.5 bits (62),  Expect = 7.3
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 0/38 (0%)
 Frame = +2

Query  98   IHQNHIXVMEKNLQPSNSSPYFPSLFHLPSTHPNLSAP  211
            +HQN +   ++N   + +SPY  S   +PS  P+ S P
Sbjct  663  LHQNSMNSRQQNPMSNANSPYGGSSVQMPSPGPSSSMP  700


>gi|49523821|emb|CAF18251.1|  SEU3B protein [Antirrhinum majus]
Length=297

 Score = 28.5 bits (62),  Expect = 7.3
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 0/38 (0%)
 Frame = +2

Query  98   IHQNHIXVMEKNLQPSNSSPYFPSLFHLPSTHPNLSAP  211
            +HQN +   ++N   + +SPY  S   +PS  P+ S P
Sbjct  60   LHQNSMNSRQQNPMSNANSPYGGSSVQMPSPGPSSSMP  97


>gi|18406799|ref|NP_566043.1|  FLA8 [Arabidopsis thaliana]
 gi|38257354|sp|O22126|FLA8_ARATH  Fasciclin-like arabinogalactan protein 8 precursor (AtAGP8)
 gi|2583108|gb|AAB82617.1|  expressed protein [Arabidopsis thaliana]
 gi|20453147|gb|AAM19815.1|  At2g45470/F4L23.2 [Arabidopsis thaliana]
 gi|23506197|gb|AAN31110.1|  At2g45470/F4L23.2 [Arabidopsis thaliana]
Length=420

 Score = 28.5 bits (62),  Expect = 7.3
 Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 0/40 (0%)
 Frame = +2

Query  158  YFPSLFHLPSTHPNLSAPLYKHLGEGPGRLGIIPELGLPG  277
            Y P   H  S    LS  LY+  G  PG LG +    L G
Sbjct  95   YDPQKLHKISKGTTLSTTLYQTTGNAPGNLGFVNITDLKG  134


>gi|92880609|gb|ABE85755.1|  Ribonuclease III [Medicago truncatula]
Length=315

 Score = 28.1 bits (61),  Expect = 9.5
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 0/40 (0%)
 Frame = +2

Query  128  KNLQPSNSSPYFPSLFHLPSTHPNLSAPLYKHLGEGPGRL  247
            K L+  N +  F +L +L   HP+      KH+  G  RL
Sbjct  9    KTLEDDNPAKQFDTLLYLAFQHPSCERTKQKHVRSGHSRL  48

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 204
Number of extensions: 2
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 350
Length of database: 101054579
Length adjustment: 84
Effective length of query: 266
Effective length of database: 77253263
Effective search space: 2472104416
Effective search space used: 2472104416
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 61 (28.1 bits)