Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168943550-32126-8749133913.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig198 Length=353
Score E Sequences producing significant alignments: (Bits) Value gi|21593201|gb|AAM65150.1| putative RNA-binding protein [Arabido 214 6e-56 gi|15217485|ref|NP_172405.1| unknown protein [Arabidopsis tha... 214 6e-56 gi|3850621|emb|CAA75602.1| putative RNA binding protein [Arabido 214 6e-56 gi|17064988|gb|AAL32648.1| g5bf protein [Arabidopsis thaliana] 213 2e-55 gi|2765081|emb|CAA71589.1| g5bf [Arabidopsis thaliana] 212 3e-55 gi|115488340|ref|NP_001066657.1| Os12g0420200 [Oryza sativa (... 207 1e-53 gi|34398360|gb|AAO22242.1| 38 kDa ribosome-associated protein... 199 2e-51 gi|115471157|ref|NP_001059177.1| Os07g0212200 [Oryza sativa (... 97.1 2e-20 gi|32746733|gb|AAP87140.1| mRNA-binding protein precursor [Nicot 93.2 2e-19 gi|15229384|ref|NP_191873.1| mRNA binding [Arabidopsis thalia... 90.5 2e-18 gi|1532135|gb|AAC49424.1| chloroplast mRNA-binding protein CSP41 89.0 5e-18 gi|26453355|gb|AAD21574.3| mRNA binding protein precursor [Lycop 87.0 2e-17 gi|116055111|emb|CAL57507.1| PREDICTED OJ1664_D08.105 gene pr... 77.0 2e-14 gi|34398358|gb|AAO22241.1| 41 kDa ribosome-associated protein... 74.7 9e-14 gi|115445775|ref|NP_001046667.1| Os02g0316800 [Oryza sativa (... 54.7 1e-07 gi|117607073|gb|ABK42080.1| mRNA-binding protein [Capsicum annuu 48.5 7e-06 gi|121077622|gb|ABM47306.1| chloroplast ribosome-associated p... 47.8 1e-05 gi|116058031|emb|CAL54234.1| GDP-mannose 4,6 dehydratase (ISS) [ 35.4 0.061 gi|115451921|ref|NP_001049561.1| Os03g0249500 [Oryza sativa (... 33.5 0.23 gi|92878845|gb|ABE85249.1| NAD-dependent epimerase/dehydratas... 32.7 0.40 gi|83700390|gb|ABC41034.1| cinnamoyl CoA reductase [Eucalyptus g 32.3 0.52 gi|83700418|gb|ABC41043.1| cinnamoyl CoA reductase [Eucalyptus a 32.3 0.52 gi|83700368|gb|ABC41026.1| cinnamoyl CoA reductase [Eucalyptu... 32.3 0.52 gi|115466832|ref|NP_001057015.1| Os06g0187200 [Oryza sativa (... 31.2 1.2 gi|83700380|gb|ABC41031.1| cinnamoyl CoA reductase [Eucalyptus c 31.2 1.2 gi|51091715|dbj|BAD36515.1| putative uridine diphosphate gala... 31.2 1.2 gi|110736741|dbj|BAF00333.1| putative nucleotide sugar epimerase 30.8 1.5 gi|65306612|gb|AAY41879.1| cinnamoyl-CoA reductase [Lycopersicon 30.8 1.5 gi|21536982|gb|AAM61323.1| nucleotide sugar epimerase, putative 30.8 1.5 gi|83700414|gb|ABC41042.1| cinnamoyl CoA reductase [Eucalyptus m 30.8 1.5 gi|83700432|gb|ABC41048.1| cinnamoyl CoA reductase [Eucalyptus p 30.8 1.5 gi|83700382|gb|ABC41032.1| cinnamoyl CoA reductase [Eucalyptus d 30.8 1.5 gi|83700366|gb|ABC41025.1| cinnamoyl CoA reductase [Eucalyptu... 30.8 1.5 gi|83700396|gb|ABC41036.1| cinnamoyl CoA reductase [Eucalyptu... 30.8 1.5 gi|10304406|gb|AAG16242.1|AF297877_1 cinnamoyl-CoA reductase [Eu 30.8 1.5 gi|50345934|gb|AAT74885.1| cinnamoyl CoA reductase [Eucalyptus g 30.8 1.5 gi|50345936|gb|AAT74886.1| cinnamoyl CoA reductase [Eucalyptus g 30.8 1.5 gi|50345914|gb|AAT74875.1| cinnamoyl CoA reductase [Eucalyptus c 30.8 1.5 gi|50345926|gb|AAT74881.1| cinnamoyl CoA reductase [Eucalyptus g 30.8 1.5 gi|50345924|gb|AAT74880.1| cinnamoyl CoA reductase [Eucalyptus g 30.8 1.5 gi|50345922|gb|AAT74879.1| cinnamoyl CoA reductase [Eucalyptus g 30.8 1.5 gi|50345920|gb|AAT74878.1| cinnamoyl CoA reductase [Eucalyptus g 30.8 1.5 gi|50345928|gb|AAT74882.1| cinnamoyl CoA reductase [Eucalyptu... 30.8 1.5 gi|50345916|gb|AAT74876.1| cinnamoyl CoA reductase [Eucalyptus g 30.8 1.5 gi|25989515|gb|AAM34502.1| cinnamoyl CoA reductase [Eucalyptu... 30.8 1.5 gi|15217591|ref|NP_171702.1| GAE2 (UDP-D-GLUCURONATE 4-EPIMER... 30.8 1.5 gi|2058311|emb|CAA56103.1| cinnamoyl-CoA reductase [Eucalyptus g 30.8 1.5 gi|2058313|emb|CAA66063.1| cinnamoyl-CoA reductase [Eucalyptus g 30.8 1.5 gi|15236712|ref|NP_191922.1| GAE3 (UDP-D-GLUCURONATE 4-EPIMER... 30.4 2.0 gi|10122033|gb|AAG13422.1|AC051634_3 putative Oxa1 protein [Oryz 30.0 2.6 gi|50345952|gb|AAT74893.1| cinnamoyl CoA reductase [Eucalyptus a 30.0 2.6 gi|115482992|ref|NP_001065089.1| Os10g0521300 [Oryza sativa (... 30.0 2.6 gi|4512681|gb|AAD21735.1| hypothetical protein [Arabidopsis t... 29.6 3.4 gi|30689119|ref|NP_850375.1| RNA binding / structural constit... 29.6 3.4 gi|17738|emb|CAA49513.1| beta-1,3-glucanase homologue [Brassica 29.3 4.4 gi|83700438|gb|ABC41050.1| cinnamoyl CoA reductase [Eucalyptus s 29.3 4.4 gi|115440391|ref|NP_001044475.1| Os01g0786900 [Oryza sativa (... 28.9 5.8 gi|53792420|dbj|BAD53258.1| breast carcinoma amplified sequen... 28.9 5.8 gi|118640877|gb|ABC40968.2| cinnamoyl CoA reductase [Corymbia ci 28.5 7.5 gi|83700246|gb|ABC40972.1| cinnamoyl CoA reductase [Corymbia hen 28.5 7.5 gi|83700244|gb|ABC40971.1| cinnamoyl CoA reductase [Corymbia hen 28.5 7.5 gi|83700262|gb|ABC40980.1| cinnamoyl CoA reductase [Corymbia cit 28.5 7.5 gi|83700248|gb|ABC40973.1| cinnamoyl CoA reductase [Corymbia mac 28.5 7.5 gi|83700252|gb|ABC40975.1| cinnamoyl CoA reductase [Corymbia chi 28.5 7.5 gi|83700268|gb|ABC40983.1| cinnamoyl CoA reductase [Corymbia dim 28.5 7.5 gi|83700258|gb|ABC40978.1| cinnamoyl CoA reductase [Corymbia lei 28.5 7.5 gi|83700242|gb|ABC40970.1| cinnamoyl CoA reductase [Corymbia cit 28.5 7.5 gi|83700256|gb|ABC40977.1| cinnamoyl CoA reductase [Corymbia mac 28.5 7.5 gi|83700266|gb|ABC40982.1| cinnamoyl CoA reductase [Corymbia pty 28.5 7.5 gi|83700240|gb|ABC40969.1| cinnamoyl CoA reductase [Corymbia cit 28.5 7.5 gi|83700254|gb|ABC40976.1| cinnamoyl CoA reductase [Corymbia can 28.5 7.5 gi|31414896|gb|AAP46143.1| cinnamoyl CoA reductase [Fragaria x a 28.1 9.8 gi|42562732|ref|NP_564633.2| MUM4 (MUCILAGE-MODIFIED 4); cata... 28.1 9.8
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 204 Number of extensions: 2 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 353 Length of database: 101054579 Length adjustment: 84 Effective length of query: 269 Effective length of database: 77253263 Effective search space: 2549357679 Effective search space used: 2549357679 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)