Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168941459-1891-1164850253.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig214 Length=529
Score E Sequences producing significant alignments: (Bits) Value gi|22597174|gb|AAN03474.1| syntaxin [Glycine max] 150 3e-36 gi|76573305|gb|ABA46757.1| syntaxin-like protein [Solanum tubero 147 2e-35 gi|92888226|gb|ABE89244.1| Syntaxin, N-terminal [Medicago trunca 143 4e-34 gi|18414953|ref|NP_567537.1| SYP23; t-SNARE [Arabidopsis thal... 139 8e-33 gi|18422725|ref|NP_568671.1| VAM3; t-SNARE [Arabidopsis thali... 137 2e-32 gi|89257672|gb|ABD65159.1| syntaxin, putative [Brassica oleracea 137 2e-32 gi|21595750|gb|AAM66128.1| syntaxin homologue [Arabidopsis thali 135 7e-32 gi|15237418|ref|NP_197185.1| SYP21; t-SNARE [Arabidopsis thal... 135 7e-32 gi|89274207|gb|ABD65611.1| syntaxin, putative [Brassica oleracea 134 1e-31 gi|7488213|pir||D71447 probable syntaxin - Arabidopsis thaliana 132 6e-31 gi|115435724|ref|NP_001042620.1| Os01g0254900 [Oryza sativa (... 128 1e-29 gi|87241300|gb|ABD33158.1| t-snare [Medicago truncatula] 104 2e-22 gi|115448147|ref|NP_001047853.1| Os02g0702800 [Oryza sativa (... 85.1 1e-16 gi|41052700|dbj|BAD07558.1| putative syntaxin [Oryza sativa (... 85.1 1e-16 gi|15222626|ref|NP_174506.1| ATSYP24 [Arabidopsis thaliana] >... 70.1 4e-12 gi|8920601|gb|AAF81323.1|AC007767_3 Contains similarity to a ... 68.9 1e-11 gi|116060733|emb|CAL57211.1| SNARE protein PEP12/VAM3/Syntaxi... 63.2 5e-10 gi|115467166|ref|NP_001057182.1| Os06g0223000 [Oryza sativa (... 56.2 7e-08 gi|51536048|dbj|BAD38174.1| putative syntaxin [Oryza sativa (jap 56.2 7e-08 gi|82581146|emb|CAJ43714.1| 4-coumaryl-CoA ligase [Plantago majo 47.8 2e-05 gi|112292931|emb|CAL35828.1| plasma memebrane H+-ATPase [Plantag 46.6 5e-05 gi|82581148|emb|CAJ43715.1| sinapyl alcohol dehydrogenase [Plant 46.6 5e-05 gi|84453230|dbj|BAE71212.1| hypothetical protein [Trifolium prat 38.1 0.018 gi|7649667|emb|CAB88874.1| phosphatidylinositol 4-kinase [Solanu 35.0 0.16 gi|63020474|gb|AAY26120.1| pollen ankyrin-like protein [Lilium l 32.0 1.3 gi|21386784|gb|AAM23299.1| Y4 protein [Silene latifolia] 30.4 3.9 gi|17902572|emb|CAC81924.1| putative fructose-2,6-bisphosphatase 30.4 3.9 gi|68655470|emb|CAJ01708.1| chromomethylase 1 [Hordeum vulgare s 30.0 5.0 gi|13359447|dbj|BAB33419.1| putative senescence-associated prote 30.0 5.0 gi|13924741|gb|AAK49119.1| cyanogenic beta-glucosidase dhurrinas 29.3 8.6
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 303 Number of extensions: 4 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 529 Length of database: 101054579 Length adjustment: 106 Effective length of query: 423 Effective length of database: 71019585 Effective search space: 4971370950 Effective search space used: 4971370950 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)