RID=1168941517-8221-160046475550.BLASTQ4, Contig218

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168941517-8221-160046475550.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig218
Length=534

Distribution of 17 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|33327292|gb|AAQ09002.1|  hypothetical protein [Phaseolus vulga   128    1e-29
gi|47834194|gb|AAT38818.1|  membrane protein [Brassica juncea]      128    1e-29
gi|18396294|ref|NP_564277.1|  unknown protein [Arabidopsis tha...   127    3e-29 
gi|9802529|gb|AAF99731.1|AC004557_10  F17L21.12 [Arabidopsis thal   125    1e-28
gi|115488784|ref|NP_001066879.1|  Os12g0514100 [Oryza sativa (...   122    6e-28 
gi|56713928|gb|AAW23954.1|  predicted membrane protein 2 [Brassic   119    6e-27
gi|47027018|gb|AAT08724.1|  unknown [Hyacinthus orientalis]         110    4e-24
gi|115473029|ref|NP_001060113.1|  Os07g0583000 [Oryza sativa (...   107    3e-23 
gi|115486381|ref|NP_001068334.1|  Os11g0637400 [Oryza sativa (...  95.9    8e-20 
gi|108862737|gb|ABA99116.2|  Ribosome associated membrane prot...  95.5    1e-19
gi|56713926|gb|AAW23953.1|  predicted membrane protein 3 [Brassic  92.0    1e-18
gi|77552122|gb|ABA94919.1|  Sugar transporter family protein, ...  90.5    3e-18
gi|116056398|emb|CAL52687.1|  Predicted membrane protein (ISS) [O  63.2    6e-10
gi|15239260|ref|NP_200835.1|  kinase [Arabidopsis thaliana] >g...  31.6    1.8   
gi|2618693|gb|AAB84340.1|  putative non-LTR retroelement rever...  31.2    2.3  
gi|6272380|gb|AAF06086.1|AC007918_10  F28J9.9 [Arabidopsis thalia  30.4    4.0  
gi|77555437|gb|ABA98233.1|  hypothetical protein LOC_Os12g2939...  30.0    5.2

Alignments

 

>gi|33327292|gb|AAQ09002.1|  hypothetical protein [Phaseolus vulgaris]
Length=68

 Score =  128 bits (322),  Expect = 1e-29
 Identities = 63/68 (92%), Positives = 66/68 (97%), Gaps = 0/68 (0%)
 Frame = +1

Query  127  MTTSRRLADRKVEKFEKNITKRGTVPETTTKKGKDYPVGPLLLGFFIFVVIGSSLFQIIR  306
            MTTSRR ADRKVEKFEKNITKRG VP+TT+KKGKDYPVGPLLLGFF+FVVIGSSLFQIIR
Sbjct  1    MTTSRRFADRKVEKFEKNITKRGFVPDTTSKKGKDYPVGPLLLGFFVFVVIGSSLFQIIR  60

Query  307  TATSGGMA  330
            TATSGGMA
Sbjct  61   TATSGGMA  68


>gi|47834194|gb|AAT38818.1|  membrane protein [Brassica juncea]
Length=68

 Score =  128 bits (321),  Expect = 1e-29
 Identities = 61/68 (89%), Positives = 67/68 (98%), Gaps = 0/68 (0%)
 Frame = +1

Query  127  MTTSRRLADRKVEKFEKNITKRGTVPETTTKKGKDYPVGPLLLGFFIFVVIGSSLFQIIR  306
            MTTS+RLADRK+EKF+KNITKRG VPETTTKKGKDYPVGP+LLGFF+FVVIGSSLFQIIR
Sbjct  1    MTTSKRLADRKIEKFDKNITKRGFVPETTTKKGKDYPVGPILLGFFVFVVIGSSLFQIIR  60

Query  307  TATSGGMA  330
            TATSGGM+
Sbjct  61   TATSGGMS  68


>gi|18396294|ref|NP_564277.1|  unknown protein [Arabidopsis thaliana]
 gi|18396300|ref|NP_564279.1|  unknown protein [Arabidopsis thaliana]
 gi|27754570|gb|AAO22732.1|  unknown protein [Arabidopsis thaliana]
 gi|28393875|gb|AAO42345.1|  unknown protein [Arabidopsis thaliana]
 gi|28416573|gb|AAO42817.1|  At1g27330 [Arabidopsis thaliana]
 gi|110743217|dbj|BAE99499.1|  hypothetical protein [Arabidopsis thaliana]
Length=68

 Score =  127 bits (318),  Expect = 3e-29
 Identities = 61/68 (89%), Positives = 66/68 (97%), Gaps = 0/68 (0%)
 Frame = +1

Query  127  MTTSRRLADRKVEKFEKNITKRGTVPETTTKKGKDYPVGPLLLGFFIFVVIGSSLFQIIR  306
            MTTS+RLADRK+EKF+KNI KRG VPETTTKKGKDYPVGP+LLGFF+FVVIGSSLFQIIR
Sbjct  1    MTTSKRLADRKIEKFDKNILKRGFVPETTTKKGKDYPVGPILLGFFVFVVIGSSLFQIIR  60

Query  307  TATSGGMA  330
            TATSGGMA
Sbjct  61   TATSGGMA  68


>gi|9802529|gb|AAF99731.1|AC004557_10  F17L21.12 [Arabidopsis thaliana]
Length=77

 Score =  125 bits (313),  Expect = 1e-28
 Identities = 60/67 (89%), Positives = 65/67 (97%), Gaps = 0/67 (0%)
 Frame = +1

Query  130  TTSRRLADRKVEKFEKNITKRGTVPETTTKKGKDYPVGPLLLGFFIFVVIGSSLFQIIRT  309
            TTS+RLADRK+EKF+KNI KRG VPETTTKKGKDYPVGP+LLGFF+FVVIGSSLFQIIRT
Sbjct  11   TTSKRLADRKIEKFDKNILKRGFVPETTTKKGKDYPVGPILLGFFVFVVIGSSLFQIIRT  70

Query  310  ATSGGMA  330
            ATSGGMA
Sbjct  71   ATSGGMA  77


>gi|115488784|ref|NP_001066879.1|  Os12g0514100 [Oryza sativa (japonica cultivar-group)]
 gi|113649386|dbj|BAF29898.1|  Os12g0514100 [Oryza sativa (japonica cultivar-group)]
Length=68

 Score =  122 bits (307),  Expect = 6e-28
 Identities = 60/68 (88%), Positives = 64/68 (94%), Gaps = 0/68 (0%)
 Frame = +1

Query  127  MTTSRRLADRKVEKFEKNITKRGTVPETTTKKGKDYPVGPLLLGFFIFVVIGSSLFQIIR  306
            MTTSRRLADRK  KF+KNITKRG+VPETT KKG DYPVGP++LGFFIFVVIGSSLFQIIR
Sbjct  1    MTTSRRLADRKSAKFQKNITKRGSVPETTVKKGNDYPVGPMVLGFFIFVVIGSSLFQIIR  60

Query  307  TATSGGMA  330
            TATSGGMA
Sbjct  61   TATSGGMA  68


>gi|56713928|gb|AAW23954.1|  predicted membrane protein 2 [Brassica juncea]
Length=62

 Score =  119 bits (298),  Expect = 6e-27
 Identities = 57/62 (91%), Positives = 61/62 (98%), Gaps = 0/62 (0%)
 Frame = +1

Query  145  LADRKVEKFEKNITKRGTVPETTTKKGKDYPVGPLLLGFFIFVVIGSSLFQIIRTATSGG  324
            LADRK+EKF+KNITKRG VPETTTKKGKDYPVGP+LLGFF+FVVIGSSLFQIIRTATSGG
Sbjct  1    LADRKIEKFDKNITKRGFVPETTTKKGKDYPVGPILLGFFVFVVIGSSLFQIIRTATSGG  60

Query  325  MA  330
            MA
Sbjct  61   MA  62


>gi|47027018|gb|AAT08724.1|  unknown [Hyacinthus orientalis]
Length=85

 Score =  110 bits (274),  Expect = 4e-24
 Identities = 53/62 (85%), Positives = 57/62 (91%), Gaps = 0/62 (0%)
 Frame = +1

Query  145  LADRKVEKFEKNITKRGTVPETTTKKGKDYPVGPLLLGFFIFVVIGSSLFQIIRTATSGG  324
            L  RK+ KF+KNITKRG+VPETT KKG DYPVGP+LLGFFIFVVIGSSLFQIIRTATSGG
Sbjct  24   LLTRKIAKFQKNITKRGSVPETTVKKGNDYPVGPILLGFFIFVVIGSSLFQIIRTATSGG  83

Query  325  MA  330
            MA
Sbjct  84   MA  85


>gi|115473029|ref|NP_001060113.1|  Os07g0583000 [Oryza sativa (japonica cultivar-group)]
 gi|27817834|dbj|BAC55602.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|50509231|dbj|BAD30501.1|  unknown protein [Oryza sativa (japonica cultivar-group)]
 gi|113611649|dbj|BAF22027.1|  Os07g0583000 [Oryza sativa (japonica cultivar-group)]
Length=67

 Score =  107 bits (266),  Expect = 3e-23
 Identities = 51/66 (77%), Positives = 60/66 (90%), Gaps = 1/66 (1%)
 Frame = +1

Query  127  MTTSRRLADRKVEKFEKNITKRGTVPETTTKKGKDYPVGPLLLGFFIFVVIGSSLFQIIR  306
            MTTSRRL+DRKV +FEKN+TKRG+VPET  KKG DYPVGP++LGFF+FVV+GSSLFQIIR
Sbjct  1    MTTSRRLSDRKVARFEKNVTKRGSVPETV-KKGNDYPVGPIVLGFFVFVVVGSSLFQIIR  59

Query  307  TATSGG  324
            TA + G
Sbjct  60   TAQNAG  65


>gi|115486381|ref|NP_001068334.1|  Os11g0637400 [Oryza sativa (japonica cultivar-group)]
 gi|113645556|dbj|BAF28697.1|  Os11g0637400 [Oryza sativa (japonica cultivar-group)]
Length=573

 Score = 95.9 bits (237),  Expect = 8e-20
 Identities = 46/54 (85%), Positives = 49/54 (90%), Gaps = 0/54 (0%)
 Frame = +1

Query  130  TTSRRLADRKVEKFEKNITKRGTVPETTTKKGKDYPVGPLLLGFFIFVVIGSSL  291
            TTSRRLADRK  KF+KNITKRG+VPETT KKG DYPVGPL+LGFFIFVVIGS L
Sbjct  12   TTSRRLADRKTAKFQKNITKRGSVPETTVKKGNDYPVGPLVLGFFIFVVIGSYL  65


>gi|108862737|gb|ABA99116.2|  Ribosome associated membrane protein RAMP4 containing protein, 
expressed [Oryza sativa (japonica cultivar-group)]
Length=66

 Score = 95.5 bits (236),  Expect = 1e-19
 Identities = 45/53 (84%), Positives = 49/53 (92%), Gaps = 0/53 (0%)
 Frame = +1

Query  127  MTTSRRLADRKVEKFEKNITKRGTVPETTTKKGKDYPVGPLLLGFFIFVVIGS  285
            MTTSRRLADRK  KF+KNITKRG+VPETT KKG DYPVGP++LGFFIFVVIGS
Sbjct  1    MTTSRRLADRKSAKFQKNITKRGSVPETTVKKGNDYPVGPMVLGFFIFVVIGS  53


>gi|56713926|gb|AAW23953.1|  predicted membrane protein 3 [Brassica juncea]
Length=51

 Score = 92.0 bits (227),  Expect = 1e-18
 Identities = 42/47 (89%), Positives = 46/47 (97%), Gaps = 0/47 (0%)
 Frame = +1

Query  145  LADRKVEKFEKNITKRGTVPETTTKKGKDYPVGPLLLGFFIFVVIGS  285
            LADRK+EKF+KNITKRG VPETTTKKGKDYPVGP+LLGFF+FVVIGS
Sbjct  1    LADRKIEKFDKNITKRGFVPETTTKKGKDYPVGPILLGFFVFVVIGS  47


>gi|77552122|gb|ABA94919.1|  Sugar transporter family protein, expressed [Oryza sativa (japonica 
cultivar-group)]
Length=544

 Score = 90.5 bits (223),  Expect = 3e-18
 Identities = 43/51 (84%), Positives = 46/51 (90%), Gaps = 0/51 (0%)
 Frame = +1

Query  127  MTTSRRLADRKVEKFEKNITKRGTVPETTTKKGKDYPVGPLLLGFFIFVVI  279
            MTTSRRLADRK  KF+KNITKRG+VPETT KKG DYPVGPL+LGFFIFV I
Sbjct  1    MTTSRRLADRKTAKFQKNITKRGSVPETTVKKGNDYPVGPLVLGFFIFVRI  51


>gi|116056398|emb|CAL52687.1|  Predicted membrane protein (ISS) [Ostreococcus tauri]
Length=110

 Score = 63.2 bits (152),  Expect = 6e-10
 Identities = 31/64 (48%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
 Frame = +1

Query  136  SRRLADRKVEKFEKNITKRGTVPETTTKKGKDYPVGPLLLGFFIFVVIGSSLFQIIRTAT  315
            S R+ + + +KF  NI +RG V     KK K++ VGP++LGFF FVVIGSS+ Q++R+A+
Sbjct  46   SARVMNHRSKKFHGNIHRRGEVSAKDAKK-KEFGVGPVMLGFFCFVVIGSSVLQVLRSAS  104

Query  316  SGGM  327
            SG +
Sbjct  105  SGAL  108


>gi|15239260|ref|NP_200835.1|  kinase [Arabidopsis thaliana]
 gi|8885577|dbj|BAA97507.1|  receptor-like protein kinase [Arabidopsis thaliana]
 gi|51969170|dbj|BAD43277.1|  receptor like protein kinase [Arabidopsis thaliana]
Length=668

 Score = 31.6 bits (70),  Expect = 1.8
 Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 0/35 (0%)
 Frame = +1

Query  178  NITKRGTVPETTTKKGKDYPVGPLLLGFFIFVVIG  282
            +I+K   VP ++TKK    PV  +LLG   F+V+G
Sbjct  266  DISKLPKVPHSSTKKKSTSPVLSVLLGLIAFIVLG  300


>gi|2618693|gb|AAB84340.1|  putative non-LTR retroelement reverse transcriptase [Arabidopsis 
thaliana]
Length=1094

 Score = 31.2 bits (69),  Expect = 2.3
 Identities = 36/152 (23%), Positives = 59/152 (38%), Gaps = 18/152 (11%)
 Frame = +1

Query  61   EIFVRFLPATVSGYL---ISPSSLIMTTSRRLADRKVEKFE--------KNITKRGTVPE  207
            +I  + L A +  YL   +SP+       R ++D  +   E        + I+K   V +
Sbjct  244  KIISKILSARLKKYLPVIVSPTQSAFVAERLVSDNIILAHEIVHNLRTNEKISKDFMVFK  303

Query  208  TTTKKGKDYPVGPLLLGFFIFVVIGSSLFQIIRTATSGGMA*VCI-------IHVKKWQR  366
            T   K  D    P L G  + +   S+    +    S     V I       I   +  R
Sbjct  304  TDMSKAYDRVEWPFLKGILLALGFNSTWINWMMACVSSVSYSVLINGQPFGHITPHRGLR  363

Query  367  RLVILCPFFLLVCRELMMHLLDVLTHIGKY*G  462
            +   L PF  ++C E ++H+L+    IGK  G
Sbjct  364  QGDPLSPFLFVLCTEALIHILNQAEKIGKISG  395


>gi|6272380|gb|AAF06086.1|AC007918_10  F28J9.9 [Arabidopsis thaliana]
Length=228

 Score = 30.4 bits (67),  Expect = 4.0
 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 0/37 (0%)
 Frame = +3

Query  420  AFTRCAYSYWQVLRILNKTSRLGSYGLFHKDSVVPFS  530
            A  R   +YW++ +I  K+ +  S GLF++D + P S
Sbjct  113  AHWRVMVAYWRIPKIKEKSEKARSSGLFNRDGLNPHS  149


>gi|77555437|gb|ABA98233.1|  hypothetical protein LOC_Os12g29390 [Oryza sativa (japonica cultivar-group)]
Length=244

 Score = 30.0 bits (66),  Expect = 5.2
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 0/29 (0%)
 Frame = +3

Query  183  YKERNCA*NNHQEGEGLSCWPFAAWVLHI  269
            ++E  C  N H+   G SCW F  + LH+
Sbjct  192  HREAECTLNLHKALRGCSCWAFGQFGLHV  220

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 511
Number of extensions: 6
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 534
Length of database: 101054579
Length adjustment: 106
Effective length of query: 428
Effective length of database: 71019585
Effective search space: 5113410120
Effective search space used: 5113410120
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 64 (29.3 bits)