Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168942675-11999-103258678069.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig233 Length=347
Related Structures Score E Sequences producing significant alignments: (Bits) Value gi|5822270|pdb|1QGN|A Chain A, Cystathionine Gamma-Synthase F... 103 1e-41 gi|5804835|emb|CAA04772.2| cystathionine gamma synthase [Frag... 102 2e-41 gi|40806079|gb|AAR92031.1| cystathionine gamma synthase [Lycoper 102 2e-41 gi|8439541|gb|AAF74981.1|AF082891_1 cystathionine gamma-synthase 102 2e-41 gi|3293261|gb|AAC25687.1| cystathionine gamma-synthase precursor 105 5e-41 gi|20259526|gb|AAM13883.1| putative cystathionine gamma-synthase 105 5e-41 gi|1373125|gb|AAC49574.1| similar to the metB gene product of... 105 5e-41 gi|15232042|ref|NP_186761.1| MTO1 (METHIONINE OVERACCUMULATIO... 105 5e-41 gi|1742961|emb|CAA64383.1| cystathionine gamma-synthase [Arabido 105 5e-41 gi|8439543|gb|AAF74982.1|AF082892_1 cystathionine gamma-synthase 103 2e-40 gi|3202028|gb|AAC19395.1| cystathionine gamma-synthase [Mesembry 100 2e-38 gi|4959932|gb|AAD34548.1|AF141602_1 cystathionine-gamma-synthase 94.7 4e-37 gi|92870065|gb|ABE79443.1| Cys/Met metabolism pyridoxal-phosp... 94.0 6e-37 gi|92883029|gb|ABE86772.1| Cys/Met metabolism pyridoxal-phosp... 95.1 1e-36 gi|113204691|gb|ABI34092.1| cystathionine gamma-synthase [Medica 94.0 3e-36 gi|108708426|gb|ABF96221.1| Cys/Met metabolism PLP-dependent ... 93.2 4e-33 gi|18921317|gb|AAL82522.1|AC084766_8 putative cystathionine gamm 93.2 4e-33 gi|2198851|gb|AAB61347.1| cystathionine gamma-synthase [Zea mays 93.2 6e-33 gi|2198853|gb|AAB61348.1| cystathionine gamma-synthase [Zea mays 93.2 6e-33 gi|15217498|ref|NP_174600.1| cystathionine gamma-synthase [Ar... 74.3 5e-27 gi|12322374|gb|AAG51206.1|AC051630_3 cystathionine gamma-synt... 66.2 1e-24 gi|115453239|ref|NP_001050220.1| Os03g0376100 [Oryza sativa (... 67.0 5e-23 gi|11602834|gb|AAG38873.1|AF076495_1 cystathionine gamma-synthas 67.0 5e-23 gi|115481894|ref|NP_001064540.1| Os10g0399700 [Oryza sativa (... 63.2 4e-21 gi|13940602|gb|AAK50404.1|AC021891_5 Putative O-succinylhomos... 62.0 9e-21 gi|78708558|gb|ABB47533.1| Cys/Met metabolism PLP-dependent e... 62.0 9e-21 gi|115481892|ref|NP_001064539.1| Os10g0399200 [Oryza sativa (... 60.1 3e-20 gi|5834422|gb|AAD31520.2|AF144102_1 cystathionine-gamma-synthase 83.6 2e-16 gi|51535796|dbj|BAD37853.1| putative O-succinylhomoserine (th... 54.7 2e-15 gi|71534904|gb|AAZ32856.1| cystathionine-gamma-synthase [Medicag 76.3 5e-15 gi|50727378|gb|AAT81295.1| cystathionine gamma synthase [Medicag 62.8 9e-11 gi|108708428|gb|ABF96223.1| Cys/Met metabolism PLP-dependent ... 64.3 1e-10 gi|108708427|gb|ABF96222.1| Cys/Met metabolism PLP-dependent ... 64.3 1e-10 gi|2146729|pir||S71228 O-succinylhomoserine (thiol)-lyase (EC... 58.2 9e-09 gi|116059552|emb|CAL55259.1| Cystathionine beta-lyases/cystat... 43.1 3e-04 gi|115482952|ref|NP_001065069.1| Os10g0517500 [Oryza sativa (... 39.3 0.004 gi|15217709|ref|NP_176647.1| catalytic [Arabidopsis thaliana]... 33.5 0.23 gi|12324074|gb|AAG52002.1|AC012563_12 hypothetical protein; 1... 31.2 1.1 gi|30697632|ref|NP_176979.2| unknown protein [Arabidopsis tha... 31.2 1.1 gi|110267785|gb|ABG57059.1| GAGA-binding transcriptional activat 30.8 1.5 gi|110267804|gb|ABG57060.1| GAGA-binding transcriptional activat 30.8 1.5 gi|83616232|gb|ABC25621.1| GAGA-binding transcriptional activ... 30.8 1.5 gi|83616240|gb|ABC25625.1| GAGA-binding transcriptional activ... 30.8 1.5 gi|83616224|gb|ABC25617.1| GAGA-binding transcriptional activ... 30.8 1.5 gi|18394147|ref|NP_563955.1| unknown protein [Arabidopsis tha... 30.8 1.5 gi|115463979|ref|NP_001055589.1| Os05g0423200 [Oryza sativa (... 29.6 3.3 gi|22326854|ref|NP_197166.2| damaged DNA binding [Arabidopsis... 29.6 3.3 gi|10176972|dbj|BAB10190.1| unnamed protein product [Arabidopsis 29.6 3.3 gi|92897904|gb|ABE93949.1| hypothetical protein MtrDRAFT_AC12... 28.9 5.6 gi|39577662|gb|AAR28441.1| basic pentacysteine 1 [Arabidopsis th 28.9 5.6 gi|18391534|ref|NP_565279.1| unknown protein [Arabidopsis tha... 28.9 5.6 gi|21594368|gb|AAM66000.1| unknown [Arabidopsis thaliana] 28.9 5.6 gi|115486992|ref|NP_001065983.1| Os12g0114400 [Oryza sativa (... 28.5 7.3 gi|77553484|gb|ABA96280.1| pentatricopeptide, putative, expre... 28.5 7.3 gi|73811199|gb|AAZ86536.1| truncated COL1 [Lolium perenne] 28.1 9.5
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 213 Number of extensions: 2 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 347 Length of database: 101054579 Length adjustment: 83 Effective length of query: 264 Effective length of database: 77536612 Effective search space: 2481171584 Effective search space used: 2481171584 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)