Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168942695-13982-102915178414.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig234 Length=723
Score E Sequences producing significant alignments: (Bits) Value gi|22536010|gb|AAN01148.1| LEC1-like protein [Phaseolus coccineu 251 2e-66 gi|55859472|emb|CAI05932.1| leafy cotyledon 1-like protein [H... 241 3e-63 gi|30695265|ref|NP_199578.2| transcription factor [Arabidopsi... 221 2e-57 gi|9758795|dbj|BAB09093.1| unnamed protein product [Arabidopsis 201 2e-51 gi|28393564|gb|AAO42202.1| unknown protein [Arabidopsis thaliana 200 4e-51 gi|3282674|gb|AAC39488.1| CCAAT-box binding factor HAP3 homolog 187 3e-47 gi|42562232|ref|NP_173616.2| LEC1 (LEAFY COTYLEDON 1); transc... 187 3e-47 gi|75337174|sp|Q9SFD8|NFYB9_ARATH Nuclear transcription facto... 187 3e-47 gi|16902050|gb|AAL27657.1| CCAAT-box binding factor HAP3 B domai 184 3e-46 gi|16902054|gb|AAL27659.1| CCAAT-box binding factor HAP3 B domai 184 4e-46 gi|37542680|gb|AAL47209.1| HAP3 transcriptional-activator [Or... 183 5e-46 gi|30349365|gb|AAP22065.1| leafy cotyledon 1 [Oryza sativa (indi 183 5e-46 gi|115448413|ref|NP_001047986.1| Os02g0725700 [Oryza sativa (... 183 5e-46 gi|46250699|dbj|BAD15083.1| CCAAT-box binding factor HAP3 homolo 181 2e-45 gi|15321716|gb|AAK95562.1|AF410176_1 leafy cotyledon1 [Zea mays] 181 3e-45 gi|45330733|dbj|BAD12396.1| HAP3 like CCAAT box binding protein 179 9e-45 gi|92888207|gb|ABE89225.1| Transcription factor CBF/NF-Y/arch... 177 3e-44 gi|110340516|gb|ABG67973.1| leafy cotyledon 1-like [Kalanchoe da 176 1e-43 gi|16902056|gb|AAL27660.1| CCAAT-box binding factor HAP3 B domai 169 1e-41 gi|40642653|emb|CAD33709.1| leafy cotyledon protein [Bixa orella 166 1e-40 gi|16902052|gb|AAL27658.1| CCAAT-box binding factor HAP3 B domai 166 1e-40 gi|37542678|gb|AAL47208.1| HAP3 transcriptional-activator [Oryza 164 3e-40 gi|115467608|ref|NP_001057403.1| Os06g0285200 [Oryza sativa (... 164 3e-40 gi|15233475|ref|NP_193190.1| transcription factor [Arabidopsi... 155 1e-37 gi|89257503|gb|ABD64993.1| transcription factor Hap3b, putative 154 2e-37 gi|115473263|ref|NP_001060230.1| Os07g0606600 [Oryza sativa (... 154 3e-37 gi|115453515|ref|NP_001050358.1| Os03g0413000 [Oryza sativa (... 154 4e-37 gi|37542669|gb|AAL47206.1| HAP3-like transcriptional-activato... 154 4e-37 gi|2398529|emb|CAA74052.1| Transcription factor [Arabidopsis tha 153 6e-37 gi|15238156|ref|NP_199575.1| transcription factor [Arabidopsi... 153 6e-37 gi|115840|sp|P25209|NFYB_MAIZE Nuclear transcription factor Y... 150 4e-36 gi|22380|emb|CAA42234.1| CAAT-box DNA binding protein subunit B 150 4e-36 gi|16902058|gb|AAL27661.1| CCAAT-box binding factor HAP3 B domai 149 8e-36 gi|73919925|sp|Q60EQ4|NFYB3_ORYSA Nuclear transcription facto... 149 8e-36 gi|30409461|dbj|BAC76332.1| HAP3 [Oryza sativa (japonica cultiva 149 8e-36 gi|18404885|ref|NP_030436.1| HAP3A; transcription factor [Ara... 148 2e-35 gi|116013394|dbj|BAF34520.1| Heading date 5 [Oryza sativa (in... 148 2e-35 gi|90186489|gb|ABD91517.1| transcription factory NF-YB [Salvia m 148 2e-35 gi|37542675|gb|AAL47207.1| HAP3-like transcriptional-activato... 148 2e-35 gi|115475021|ref|NP_001061107.1| Os08g0174500 [Oryza sativa (... 146 7e-35 gi|42570373|ref|NP_850277.2| transcription factor [Arabidopsi... 146 7e-35 gi|75253979|sp|Q67XJ2|NFYBA_ARATH Nuclear transcription facto... 145 1e-34 gi|15231796|ref|NP_190902.1| transcription factor [Arabidopsi... 145 1e-34 gi|116831067|gb|ABK28488.1| unknown [Arabidopsis thaliana] 144 3e-34 gi|15225440|ref|NP_178981.1| transcription factor [Arabidopsi... 144 3e-34 gi|15408794|dbj|BAB64190.1| putative HAP3-like transcriptiona... 144 3e-34 gi|33242897|gb|AAQ01152.1| CCAAT-binding protein [Oryza sativa ( 143 6e-34 gi|53749319|gb|AAU90178.1| putative CCAAT-binding transcripti... 143 6e-34 gi|30409459|dbj|BAC76331.1| HAP3 [Oryza sativa (japonica cultiva 143 6e-34 gi|115464351|ref|NP_001055775.1| Os05g0463800 [Oryza sativa (... 143 8e-34 gi|30687688|ref|NP_850304.1| HAP3A; transcription factor [Ara... 142 1e-33 gi|4371295|gb|AAD18153.1| putative CCAAT-box binding trancrip... 141 2e-33 gi|119358836|emb|CAL52202.2| Nfy Histone-like transcription f... 141 3e-33 gi|15227134|ref|NP_182302.1| transcription factor [Arabidopsi... 140 4e-33 gi|73919924|sp|Q5QMG3|NFYB2_ORYSA Nuclear transcription facto... 140 6e-33 gi|81074849|gb|ABB55377.1| transcription factor NF-Y CCAAT-bi... 138 2e-32 gi|115440879|ref|NP_001044719.1| Os01g0834400 [Oryza sativa (... 137 4e-32 gi|29367577|gb|AAO72650.1| CCAAT-binding transcription factor... 135 1e-31 gi|115465567|ref|NP_001056383.1| Os05g0573500 [Oryza sativa (... 132 1e-30 gi|52353540|gb|AAU44106.1| putative transcription factor HAP3... 132 2e-30 gi|89257496|gb|ABD64986.1| leafy cotyledon 1-like L1L protein... 130 4e-30 gi|15223998|ref|NP_172377.1| transcription factor [Arabidopsi... 120 7e-27 gi|28274147|gb|AAO33918.1| putative CCAAT-binding transcripti... 118 2e-26 gi|57899593|dbj|BAD87172.1| putative HAP3-like transcriptiona... 114 4e-25 gi|92882267|gb|ABE86662.1| Transcription factor CBF/NF-Y/arch... 112 1e-24 gi|13928060|emb|CAC37695.1| NF-YB1 protein [Oryza sativa (japoni 92.0 2e-18 gi|115448415|ref|NP_001047987.1| Os02g0725900 [Oryza sativa (... 90.5 6e-18 gi|45735896|dbj|BAD12929.1| putative NF-YB1 protein [Oryza sa... 90.5 6e-18 gi|9965735|gb|AAG10144.1|AF250338_1 transcription factor Hap3b [ 88.6 2e-17 gi|18481628|gb|AAL73489.1|AF464906_1 repressor protein [Glycine 78.6 2e-14 gi|30688804|ref|NP_851060.1| transcription factor [Arabidopsi... 75.9 1e-13 gi|79328468|ref|NP_001031927.1| unknown protein [Arabidopsis tha 74.3 4e-13 gi|115476204|ref|NP_001061698.1| Os08g0383700 [Oryza sativa (... 73.9 6e-13 gi|8346556|emb|CAB93720.1| DR1-like protein [Arabidopsis thalian 72.4 2e-12 gi|18415737|ref|NP_568190.1| DNA binding / transcription fact... 72.4 2e-12 gi|18481622|gb|AAL73486.1|AF464903_1 repressor protein [Triticum 67.8 4e-11 gi|30688817|ref|NP_197700.2| transcription factor [Arabidopsis t 62.4 2e-09 gi|116057499|emb|CAL51926.1| CCAAT-binding factor, subunit A ... 54.3 5e-07 gi|115480751|ref|NP_001063969.1| Os09g0568200 [Oryza sativa (... 53.9 6e-07 gi|45330735|dbj|BAD12397.1| HAP3 like CCAAT box binding protein 52.8 1e-06 gi|45330737|dbj|BAD12398.1| HAP3-like CCAAT box binding protein 50.4 7e-06 gi|45330741|dbj|BAD12400.1| HAP3 like CCAAT box binding protein 47.0 1e-05 gi|15225884|ref|NP_180316.1| transcription factor [Arabidopsi... 46.6 1e-04 gi|116058895|emb|CAL54602.1| Glucose-6-phosphate/phosphate an... 44.7 4e-04 gi|116061485|emb|CAL52203.1| Histone-like transcription facto... 41.6 0.003 gi|45330739|dbj|BAD12399.1| HAP3-like CCAAT box binding protein 34.7 0.38 gi|37572922|dbj|BAC98516.1| hypothetical protein [Oryza sativ... 32.3 1.9 gi|40645752|dbj|BAD06717.1| WRKY transcription factor 1 [Spinaci 31.2 4.2 gi|50508930|dbj|BAD31835.1| putative high-affinity potassium ... 30.8 5.4 gi|55792824|gb|AAV65495.1| trehalose 6-phosphate synthase [Gossy 30.4 7.1 gi|115481236|ref|NP_001064211.1| Os10g0162200 [Oryza sativa (... 30.4 7.1 gi|30024108|emb|CAC84682.1| putative histone H1 [Pinus pinaster] 30.0 9.3 gi|30684152|ref|NP_568283.2| oxoglutarate:malate antiporter [... 30.0 9.3 gi|77551553|gb|ABA94350.1| retrotransposon protein, putative,... 30.0 9.3 gi|115465890|ref|NP_001056544.1| Os06g0103700 [Oryza sativa (... 30.0 9.3
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 531 Number of extensions: 5 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 723 Length of database: 101054579 Length adjustment: 110 Effective length of query: 613 Effective length of database: 69886189 Effective search space: 9155090759 Effective search space used: 9155090759 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 66 (30.0 bits)