Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168942797-21997-149429085112.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig238 Length=534
Related Structures Score E Sequences producing significant alignments: (Bits) Value gi|51039630|gb|AAT94362.1| putative chalcone isomerase 4 [Glycin 202 6e-52 gi|18414838|ref|NP_568154.1| unknown protein [Arabidopsis tha... 197 1e-50 gi|10176739|dbj|BAB09970.1| unnamed protein product [Arabidopsis 189 4e-48 gi|115487006|ref|NP_001065990.1| Os12g0115700 [Oryza sativa (... 185 7e-47 gi|115483851|ref|NP_001065587.1| Os11g0116300 [Oryza sativa (... 183 4e-46 gi|51039632|gb|AAT94363.1| chalcone isomerase 4B [Glycine max] 167 3e-41 gi|5921722|sp|O65333|CFI_ELAUM Chalcone--flavonone isomerase ... 75.9 8e-14 gi|76152009|gb|AAZ17563.2| chalcone isomerase [Camellia sinensis 72.4 9e-13 gi|84578875|dbj|BAE72880.1| chalcone isomerase [Verbena x hybrid 72.0 1e-12 gi|50788695|dbj|BAD34458.1| chalcone isomerase [Eustoma grandifl 71.6 2e-12 gi|51039626|gb|AAT94360.1| chalcone isomerase 2 [Glycine max] 70.9 3e-12 gi|1705761|sp|P51117|CFI_VITVI Chalcone--flavonone isomerase ... 70.9 3e-12 gi|73696205|gb|AAZ80910.1| chalcone isomerase [Canna generalis] 70.5 3e-12 gi|73696207|gb|AAZ80911.1| chalcone isomerase [Canna generalis] 70.5 3e-12 gi|62433123|dbj|BAD95484.1| chalcone flavonone isomerase [Gentia 70.1 5e-12 gi|3023465|sp|Q43754|CFI_DIACA Chalcone--flavonone isomerase ... 68.2 2e-11 gi|4126399|dbj|BAA36552.1| chalcone isomerase [Citrus sinensis] 66.6 5e-11 gi|228617|prf||1807331A chalcone flavanone isomerase 66.2 7e-11 gi|116136|sp|P11650|CFIA_PETHY Chalcone--flavonone isomerase ... 65.5 1e-10 gi|7331150|gb|AAF60296.1|AF233637_1 chalcone isomerase A [Petuni 65.1 1e-10 gi|71979900|dbj|BAE17120.1| chalcone isomerase [Fragaria x anana 65.1 1e-10 gi|27530603|dbj|BAC53984.1| putative chalcone isomerase [Lotus j 65.1 1e-10 gi|21327031|gb|AAM48130.1|AF509335_1 chalcone isomerase [Saussur 64.7 2e-10 gi|71979902|dbj|BAE17121.1| chalcone isomerase [Fragaria x anana 64.3 2e-10 gi|116138|sp|P11651|CFIB_PETHY Chalcone--flavonone isomerase ... 64.3 2e-10 gi|80751010|dbj|BAE48085.1| chalcone isomerase [Nicotiana tabacu 63.5 4e-10 gi|3041652|sp|P14298|CFI_PHAVU Chalcone--flavonone isomerase ... 63.5 4e-10 gi|20152986|gb|AAM13449.1|AF474923_1 chalcone isomerase [Hordeum 62.8 7e-10 gi|51871111|gb|AAU11843.1| chalcone isomerase [Allium cepa] 62.4 9e-10 gi|51871113|gb|AAU11844.1| chalcone isomerase [Allium cepa] 62.4 9e-10 gi|44889630|gb|AAS48418.1| chalcone isomerase [Allium cepa] >... 62.4 9e-10 gi|116134|sp|P28012|CFI1_MEDSA Chalcone--flavonone isomerase ... 62.0 1e-09 gi|18203239|sp|Q9LKC3|CHI_ARALP Chalcone--flavonone isomerase... 61.6 2e-09 gi|115456227|ref|NP_001051714.1| Os03g0819600 [Oryza sativa (... 61.2 2e-09 gi|20152984|gb|AAM13448.1|AF474922_1 chalcone isomerase [Oryza s 61.2 2e-09 gi|121485996|gb|ABK88308.2| chalcone isomerase [Chrysanthemum x 60.8 3e-09 gi|118421281|gb|ABK88309.1| chalcone isomerase [Chrysanthemum x 60.8 3e-09 gi|81864|pir||S14705 chalcone isomerase (EC 5.5.1.6) - kidney... 60.8 3e-09 gi|22218879|pdb|1JX0|A Chain A, Chalcone Isomerase--Y106f Mut... 60.5 4e-09 gi|28804193|emb|CAD69022.1| chalcone isomerase [Lotus japonicus] 60.1 5e-09 gi|22218881|pdb|1JX1|A Chain A, Chalcone Isomerase--T48a Muta... 60.1 5e-09 gi|27530601|dbj|BAC53983.1| putative chalcone isomerase [Lotus j 60.1 5e-09 gi|5921725|sp|O22651|CFI_RAPSA Chalcone--flavonone isomerase ... 59.7 6e-09 gi|60099394|dbj|BAD89981.1| mutant protein of chalcone isomerase 59.3 8e-09 gi|51039624|gb|AAT94359.1| chalcone isomerase 1B1 [Glycine max] 59.3 8e-09 gi|51039634|gb|AAT94364.1| chalcone isomerase 1B2 [Glycine max] 59.3 8e-09 gi|15233190|ref|NP_191072.1| TT5 (TRANSPARENT TESTA 5); chalc... 59.3 8e-09 gi|5921723|sp|O22604|CFI_IPOPU Chalcone--flavonone isomerase ... 59.3 8e-09 gi|166660|gb|AAA32766.1| chalcone isomerase [Arabidopsis thal... 59.3 8e-09 gi|8670918|emb|CAB94970.1| chalcone flavanone isomerase [Arabido 59.3 8e-09 gi|27530707|dbj|BAC54038.1| chalcone isomerase [Lotus japonicus] 59.3 8e-09 gi|8670955|emb|CAB94981.1| chalcone flavanone isomerase [Arab... 59.3 8e-09 gi|21536962|gb|AAM61303.1| chalcone isomerase, putative [Arabido 58.9 1e-08 gi|19223828|dbj|BAB85838.1| chalcone isomerase [Ipomoea batatas] 58.9 1e-08 gi|5921724|sp|Q43056|CFI_PUELO Chalcone--flavonone isomerase ... 58.9 1e-08 gi|6778727|dbj|BAA90334.1| chalcone isomerase [Ipomoea batatas] 58.9 1e-08 gi|729103|sp|Q08704|CFI_MAIZE Chalcone--flavonone isomerase (... 58.2 2e-08 gi|116135|sp|P28013|CFI2_MEDSA Chalcone--flavonone isomerase ... 57.0 4e-08 gi|8671874|gb|AAF78437.1|AC018748_16 Contains a weak similari... 56.6 5e-08 gi|15220807|ref|NP_175757.1| unknown protein [Arabidopsis tha... 56.6 5e-08 gi|5921721|sp|Q42663|CFI_CALCH Chalcone--flavonone isomerase ... 56.6 5e-08 gi|77455574|gb|ABA86593.1| putative chalcone isomerase [Aquilegi 54.7 2e-07 gi|729104|sp|P41089|CFI_PEA Chalcone--flavonone isomerase (Ch... 52.8 7e-07 gi|14582263|gb|AAK69432.1|AF276302_1 chalcone isomerase [Glyc... 52.4 1e-06 gi|112806958|dbj|BAF03075.1| chalcone isomerase [Solanum melonge 52.0 1e-06 gi|51039628|gb|AAT94361.1| putative chalcone isomerase 3 [Glycin 51.6 2e-06 gi|13924652|gb|AAK49088.1|AF258296_1 chalcone flavonone synthase 49.7 6e-06 gi|47679001|dbj|BAC98341.2| chalcone isomerase [Prunus persica] 49.3 8e-06 gi|13924644|gb|AAK49085.1|AF258293_1 chalcone flavonone synthase 48.1 2e-05 gi|28804474|dbj|BAC58031.1| chalcone flavanone isomerase [Raphan 48.1 2e-05 gi|13924647|gb|AAK49086.1|AF258294_1 chalcone flavonone synth... 47.4 3e-05 gi|13924655|gb|AAK49089.1|AF258297_1 chalcone flavonone synthase 47.0 4e-05 gi|76786619|gb|ABA55017.1| chalcone isomerase [Astragalus membra 46.6 5e-05 gi|15239301|ref|NP_201423.1| chalcone isomerase [Arabidopsis ... 45.8 9e-05 gi|19585|emb|CAA48774.1| chalcone isomerase [Malus sp.] 42.7 8e-04 gi|19587|emb|CAA48775.1| chalcone isomerase [Malus sp.] 42.7 8e-04 gi|115445809|ref|NP_001046684.1| Os02g0320300 [Oryza sativa (... 42.4 0.001 gi|13919599|gb|AAK33135.1| chalcone isomerase [Fragaria vesca su 40.8 0.003 gi|91807102|gb|ABE66278.1| chalcone-flavanone isomerase/chalc... 36.6 0.055
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 360 Number of extensions: 7 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 534 Length of database: 101054579 Length adjustment: 106 Effective length of query: 428 Effective length of database: 71019585 Effective search space: 5113410120 Effective search space used: 5113410120 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)