Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168943056-13002-72033651564.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig248 Length=1178
Score E Sequences producing significant alignments: (Bits) Value gi|2662343|dbj|BAA23658.1| EF-1 alpha [Oryza sativa] 358 3e-151 gi|74486734|gb|ABA12220.1| translation elongation factor 1A-4 [G 362 1e-149 gi|1169476|sp|P43643|EF1A_TOBAC Elongation factor 1-alpha (EF... 355 2e-149 gi|74486736|gb|ABA12221.1| translation elongation factor 1A-5 [G 362 4e-149 gi|74486728|gb|ABA12217.1| translation elongation factor 1A-1 [G 362 5e-149 gi|74486742|gb|ABA12224.1| translation elongation factor 1A-8 [G 363 9e-149 gi|74486744|gb|ABA12225.1| translation elongation factor 1A-9 [G 361 9e-149 gi|74486730|gb|ABA12218.1| translation elongation factor 1A-2 [G 360 9e-149 gi|7230387|gb|AAF42977.1| elongation factor 1 alpha [Zea mays] 357 1e-148 gi|6015058|sp|O49169|EF1A_MANES Elongation factor 1-alpha (EF... 361 1e-148 gi|108706481|gb|ABF94276.1| Elongation factor 1-alpha, putati... 358 2e-148 gi|115451089|ref|NP_001049145.1| Os03g0177400 [Oryza sativa (... 358 2e-148 gi|15081765|gb|AAK82537.1| At1g07930/T6D22_3 [Arabidopsis thalia 350 2e-148 gi|7230385|gb|AAF42976.1| elongation factor 1 alpha [Zea mays] 357 3e-148 gi|48527431|gb|AAT45847.1| elongation factor 1-alpha 1 [Elaeis g 363 6e-148 gi|74486732|gb|ABA12219.1| translation elongation factor 1A-3 [G 358 7e-148 gi|2996096|gb|AAC15413.1| translation elongation factor-1 alp... 357 7e-148 gi|74486740|gb|ABA12223.1| translation elongation factor 1A-7 [G 358 9e-148 gi|24371055|dbj|BAC22125.1| eukaryotic elongation factor 1A [Bru 364 2e-147 gi|1864017|dbj|BAA09709.1| elongation factor-1 alpha [Nicotiana 355 2e-147 gi|26324158|gb|AAN77897.1| elongation factor 1 alpha [Stevia reb 356 3e-147 gi|66775524|gb|AAY56337.1| elongation factor-1 alpha [Musa acumi 352 5e-147 gi|18873725|gb|AAL79774.1|AF331849_1 elongation factor 1 alpha [ 359 1e-146 gi|74486738|gb|ABA12222.1| translation elongation factor 1A-6 [G 357 1e-146 gi|18873727|gb|AAL79775.1| elongation factor 1 alpha [Saccharum 359 1e-146 gi|3319882|emb|CAA06245.1| elongation factor 1-alpha (EF1-a) [Ci 352 1e-146 gi|3869088|dbj|BAA34348.1| elongation factor-1 alpha [Nicotiana 353 1e-146 gi|24745945|dbj|BAC23049.1| Elongation factor 1-alpha [Solanum t 352 3e-146 gi|119150|sp|P17786|EF1A_LYCES Elongation factor 1-alpha (EF-... 351 3e-146 gi|5917747|gb|AAD56020.1|AF181492_1 elongation factor-1 alpha 3 353 4e-146 gi|2282584|gb|AAB64207.1| elongation factor 1-alpha [Zea mays] 357 5e-146 gi|4138179|emb|CAA11705.1| elongation factor 1 alpha subunit [Ma 350 9e-146 gi|8778823|gb|AAF79822.1|AC026875_2 T6D22.2 [Arabidopsis thalian 350 1e-145 gi|110741201|dbj|BAF02151.1| elongation factor 1-alpha [Arabidop 350 1e-145 gi|295789|emb|CAA34456.1| elongation factor 1-alpha [Arabidopsis 350 1e-145 gi|13430510|gb|AAK25877.1|AF360167_1 putative translation elo... 350 1e-145 gi|13605682|gb|AAK32834.1|AF361822_1 At1g07930/T6D22_3 [Arabi... 350 1e-145 gi|15239308|ref|NP_200847.1| calmodulin binding / translation... 350 1e-145 gi|29892963|emb|CAD60652.1| elongation factor [Solanum tuberosum 353 2e-145 gi|82621190|gb|ABB86283.1| elongation factor-1 alpha-like [Solan 350 2e-145 gi|3122071|sp|Q41803|EF1A_MAIZE Elongation factor 1-alpha (EF... 354 3e-145 gi|81076159|gb|ABB55388.1| elongation factor 1-alpha-like [Solan 350 4e-145 gi|23397097|gb|AAN31833.1| putative translation elongation fa... 348 4e-145 gi|77999257|gb|ABB16975.1| elongation factor 1-alpha-like protei 350 4e-145 gi|29243204|dbj|BAC66180.1| elongation factor 1A [Avicennia mari 354 6e-145 gi|77999299|gb|ABB16996.1| elongation factor 1-alpha-like protei 350 7e-145 gi|83283977|gb|ABC01896.1| elongation factor 1-alpha-like protei 348 7e-145 gi|4680249|gb|AAD27590.1|AF121261_1 elongation factor 1-alpha 1; 353 7e-145 gi|5917745|gb|AAD56019.1|AF181491_1 elongation factor-1 alpha 2 351 7e-145 gi|7230391|gb|AAF42979.1| elongation factor 1 alpha [Zea mays] 346 1e-144 gi|18086389|gb|AAL57653.1| At1g07930/T6D22_3 [Arabidopsis thalia 350 1e-144 gi|77745446|gb|ABB02622.1| elongation factor 1-alpha-like protei 348 1e-144 gi|17064954|gb|AAL32631.1| putative elongation factor 1-a [Ar... 346 2e-144 gi|7230397|gb|AAF42982.1| elongation factor 1 alpha [Zea mays] 353 2e-144 gi|61741088|gb|AAX54511.1| elongation factor 1 alpha [Actinidia 351 2e-144 gi|3122060|sp|O24534|EF1A_VICFA Elongation factor 1-alpha (EF... 348 2e-143 gi|18419676|gb|AAL69396.1| elongation factor 1-alpha [Elaeis ole 350 3e-143 gi|232029|sp|P29521|EF1A1_DAUCA Elongation factor 1-alpha (EF... 347 3e-143 gi|7230393|gb|AAF42980.1| elongation factor 1 alpha [Zea mays] 345 4e-143 gi|7230395|gb|AAF42981.1| elongation factor 1 alpha [Zea mays] 343 4e-143 gi|1352345|sp|P25698|EF1A_SOYBN Elongation factor 1-alpha (EF... 343 5e-143 gi|89276321|gb|ABD66517.1| EF-1 alpha [Gymnadenia conopsea] 355 7e-143 gi|82400148|gb|ABB72813.1| elongation factor 1-alpha-like protei 341 9e-143 gi|399414|sp|Q03033|EF1A_WHEAT Elongation factor 1-alpha (EF-... 342 9e-143 gi|7230389|gb|AAF42978.1| elongation factor 1 alpha [Zea mays] 346 1e-142 gi|12580861|emb|CAC27139.1| translation elongation factor-1 alph 343 2e-142 gi|24371059|dbj|BAC22127.1| eukaryotic elongation factor 1A [Sal 346 2e-142 gi|9802384|gb|AAF99703.1| elongation factor [Saccharum officinar 348 3e-142 gi|461987|sp|P34823|EF1A2_DAUCA Elongation factor 1-alpha (EF... 349 3e-142 gi|7542600|gb|AAF63516.1|AF242732_1 translation elongation facto 345 2e-141 gi|3122053|sp|Q41011|EF1A_PEA Elongation factor 1-alpha (EF-1... 342 5e-141 gi|461988|sp|P34824|EF1A1_HORVU Elongation factor 1-alpha (EF-1- 335 1e-140 gi|24371057|dbj|BAC22126.1| eukaryotic elongation factor 1A [Sua 335 2e-140 gi|6015054|sp|Q40034|EF1A2_HORVU Elongation factor 1-alpha (E... 337 2e-140 gi|37222953|gb|AAQ90154.1| putative translation elongation fa... 349 8e-135 gi|29419231|gb|AAO61852.1| translation elongation factor-1 alpha 327 1e-133 gi|40217939|gb|AAR82894.1| elongation factor 1-alpha [Cichorium 293 1e-127 gi|79331520|ref|NP_001032107.1| calmodulin binding / translat... 251 3e-120 gi|4731316|gb|AAD28440.1| elongation factor 1-alpha [Nicotiana t 270 4e-120 gi|89275337|gb|ABD66072.1| elongation factor 1-alpha [Phoenix da 334 1e-112 gi|106879593|emb|CAJ38380.1| translation elongation factor 1 alp 352 3e-111 gi|56481389|gb|AAV92325.1| translation elongation factor-1 al... 345 2e-109 gi|1235563|emb|CAA65453.1| elongation factor [Narcissus pseudona 343 2e-105 gi|110224776|emb|CAL07988.1| translation elongation factor 1 alp 359 3e-105 gi|110681478|emb|CAL25349.1| elongation factor 1 alpha [Platanus 358 2e-98 gi|108706480|gb|ABF94275.1| Elongation factor 1-alpha, putati... 189 2e-93 gi|50263010|gb|AAT72900.1| elongation factor 1A SMV resistanc... 328 2e-89 gi|54399520|gb|AAV34150.1| EF-1 alpha [Acetabularia acetabulum] 308 6e-87 gi|90811691|gb|ABD98043.1| elongation factor 1 alpha subunit [St 280 6e-80 gi|118722800|gb|ABL10112.1| translation elongation factor 1-alph 288 3e-77 gi|40287502|gb|AAR83865.1| elongation factor 1-alpha [Capsicum a 287 7e-77 gi|77999261|gb|ABB16977.1| elongation factor 1-alpha-like protei 187 8e-77 gi|21632054|gb|AAK85129.1| elongation factor [Juniperus ashei] 261 1e-76 gi|90823336|gb|ABE01138.1| elongation factor 1-alpha [Daucus car 178 4e-74 gi|1732359|gb|AAC06383.1| elongation factor 1 alpha [Malus x dom 248 3e-65 gi|20501713|gb|AAM19764.1| elongation factor 1 alpha [Heliant... 189 1e-63 gi|37783255|gb|AAP04393.1| translation elongation factor 1 alpha 189 3e-63 gi|62319702|dbj|BAD95246.1| translation elongation factor eEF... 239 1e-62 gi|32400867|gb|AAP80665.1|AF479046_1 elongation factor-1 alpha [ 227 6e-59 gi|73622869|gb|AAZ78473.1| elongation factor 1-alpha [Targionia 141 3e-58
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 829 Number of extensions: 9 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 1178 Length of database: 101054579 Length adjustment: 115 Effective length of query: 1063 Effective length of database: 68469444 Effective search space: 18966035988 Effective search space used: 18966035988 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 69 (31.2 bits)