Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168929540-5039-54879624485.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig25 Length=493
Score E Sequences producing significant alignments: (Bits) Value gi|71040677|gb|AAZ20287.1| ubiquitin-conjugating enzyme 2 [Arach 70.9 1e-25 gi|115454925|ref|NP_001051063.1| Os03g0712300 [Oryza sativa (... 66.6 3e-24 gi|18395221|ref|NP_564191.1| ubiquitin conjugating enzyme/ ub... 65.9 6e-24 gi|13324790|gb|AAK18838.1|AC082645_8 putative DNA-binding protei 66.6 2e-23 gi|115478418|ref|NP_001062804.1| Os09g0297100 [Oryza sativa (... 64.3 2e-23 gi|18404032|ref|NP_565834.1| ubiquitin conjugating enzyme/ ub... 65.5 2e-23 gi|18409633|ref|NP_566968.1| ubiquitin conjugating enzyme/ ub... 65.5 2e-23 gi|115489474|ref|NP_001067224.1| Os12g0605400 [Oryza sativa (... 65.5 2e-23 gi|21593918|gb|AAM65883.1| E2, ubiquitin-conjugating enzyme, ... 64.7 5e-23 gi|18409647|ref|NP_564994.1| ubiquitin conjugating enzyme/ ub... 64.7 5e-23 gi|46577794|gb|AAT01417.1| ubiquitin-conjugating enzyme famil... 65.5 6e-23 gi|76160962|gb|ABA40444.1| ubiquitin-conjugating enzyme famil... 63.9 6e-23 gi|75755857|gb|ABA26987.1| TO38-23 [Taraxacum officinale] 63.9 6e-23 gi|2982253|gb|AAC32114.1| CROC-1-like protein [Picea mariana] 62.8 3e-22 gi|30686662|ref|NP_850259.1| ubiquitin conjugating enzyme/ ub... 62.8 5e-22 gi|30693656|ref|NP_850684.1| ubiquitin conjugating enzyme/ ub... 62.8 5e-22 gi|32488709|emb|CAE03452.1| OSJNBa0088H09.10 [Oryza sativa (j... 63.5 9e-22 gi|9295713|gb|AAF87019.1|AC005292_28 F26F24.10 [Arabidopsis thal 65.9 3e-21 gi|75755827|gb|ABA26973.1| TO25-123 [Taraxacum officinale] 63.9 6e-19 gi|115461424|ref|NP_001054312.1| Os04g0684800 [Oryza sativa (... 63.5 8e-18 gi|17644141|gb|AAL38985.1| ubiquitin-conjugating enzyme E2 is... 53.5 3e-16 gi|116059844|emb|CAL55551.1| Ubiquitin-conjugating enzyme E2 (IS 37.7 4e-06 gi|121077798|gb|ABM47315.1| ubiquitin conjugating enzyme E2 [Vol 39.3 0.007 gi|21618179|gb|AAM67229.1| E2, ubiquitin-conjugating enzyme, ... 35.8 0.079 gi|18402475|ref|NP_566653.1| UBC19; ubiquitin conjugating enz... 34.3 0.23 gi|12322332|gb|AAG51188.1|AC079279_9 cyclin-specific ubiquiti... 33.9 0.30 gi|9454557|gb|AAF87880.1|AC012561_13 Putative ubiquitin carrier 33.9 0.30 gi|18403097|ref|NP_564572.1| UBC20; ubiquitin conjugating enz... 33.9 0.30 gi|18424219|ref|NP_568902.1| UBC7; ubiquitin conjugating enzyme 33.5 0.39 gi|79313223|ref|NP_001030691.1| FUS9 (FUSCA 9); ubiquitin con... 33.1 0.51 gi|52851174|emb|CAH58635.1| Ubiquitin-conjugating enzyme [Planta 33.1 0.51 gi|22331064|ref|NP_566459.2| FUS9 (FUSCA 9); ubiquitin conjug... 33.1 0.51 gi|18420949|ref|NP_568476.1| ubiquitin conjugating enzyme/ ub... 32.3 0.88 gi|115447471|ref|NP_001047515.1| Os02g0634800 [Oryza sativa (... 32.3 0.88 gi|28973769|gb|AAO64200.1| putative E2, ubiquitin-conjugating... 32.0 1.1 gi|19347846|gb|AAL86003.1| putative E2, ubiquitin-conjugating... 32.0 1.1 gi|31088843|sp|Q42540|UBC7_ARATH Ubiquitin-conjugating enzyme... 32.0 1.1 gi|115435910|ref|NP_001042713.1| Os01g0273100 [Oryza sativa (... 31.6 1.5 gi|18408206|ref|NP_566884.1| ubiquitin conjugating enzyme/ ub... 31.6 1.5 gi|115187640|gb|ABI84264.1| ubiquitin-conjugating enzyme [Arachi 31.2 2.0 gi|115452601|ref|NP_001049901.1| Os03g0308000 [Oryza sativa (... 31.2 2.0 gi|115187678|gb|ABI84266.1| ubiquitin-conjugating enzyme 1 like 30.8 2.5 gi|115472979|ref|NP_001060088.1| Os07g0577400 [Oryza sativa (... 30.0 4.3 gi|115440721|ref|NP_001044640.1| Os01g0819400 [Oryza sativa (... 30.0 4.3 gi|2668744|gb|AAB88617.1| ubiquitin conjugating enzyme [Zea mays 30.0 4.3 gi|34393509|dbj|BAC83070.1| putative elicitor inducible beta-... 30.0 4.3 gi|21104784|dbj|BAB93371.1| ubiquitin conjugating enzyme [Ory... 30.0 4.3 gi|115187598|gb|ABI84262.1| ubiquitin-conjugating enzyme 9 [Arac 29.6 5.7 gi|115464311|ref|NP_001055755.1| Os05g0460200 [Oryza sativa (... 29.6 5.7 gi|2624417|emb|CAA05772.1| Ubiquitin carrier protein [Zea mays] 29.6 5.7 gi|115440951|ref|NP_001044755.1| Os01g0839700 [Oryza sativa (... 29.6 5.7 gi|2641619|gb|AAC12662.1| ubiquitin-conjugating enzyme protein E 29.6 5.7 gi|18400088|ref|NP_564472.1| ubiquitin conjugating enzyme/ ub... 29.6 5.7 gi|18398206|ref|NP_566331.1| ubiquitin conjugating enzyme/ ub... 29.6 5.7 gi|297880|emb|CAA78716.1| ubiquitin conjugating enzyme [Arabi... 29.6 5.7 gi|115454263|ref|NP_001050732.1| Os03g0638800 [Oryza sativa (... 29.3 7.4 gi|37718855|gb|AAR01726.1| putative protein kinase [Oryza sat... 29.3 7.4 gi|79321461|ref|NP_001031298.1| ubiquitin conjugating enzyme/... 29.3 7.4 gi|5381319|gb|AAD42941.1|AF091621_1 ubiquitin-conjugating enzyme 29.3 7.4 gi|3834310|gb|AAC83026.1| Similar to Ubiquitin-conjugating en... 29.3 7.4 gi|75755940|gb|ABA27026.1| TO71-1 [Taraxacum officinale] 29.3 7.4 gi|71040675|gb|AAZ20286.1| ubiquitin-conjugating enzyme 1 [Arach 29.3 7.4 gi|30685060|ref|NP_849678.1| ubiquitin conjugating enzyme/ ub... 29.3 7.4 gi|18394416|ref|NP_564011.1| ubiquitin conjugating enzyme/ ub... 29.3 7.4 gi|18412149|ref|NP_565192.1| ubiquitin conjugating enzyme/ ub... 29.3 7.4 gi|136647|sp|P25868|UBC7_WHEAT Ubiquitin-conjugating enzyme E... 29.3 7.4 gi|115439109|ref|NP_001043834.1| Os01g0673600 [Oryza sativa (... 29.3 7.4 gi|18410268|ref|NP_567020.1| ubiquitin conjugating enzyme/ ub... 29.3 7.4 gi|116058207|emb|CAL53396.1| Ubiquitin-protein ligase (ISS) [Ost 28.9 9.7 gi|110289483|gb|ABG66220.1| Ubiquitin-conjugating enzyme E2 I... 28.9 9.7 gi|63079015|gb|AAY29571.1| immature spike ubiquitin-conjugati... 28.9 9.7 gi|81076243|gb|ABB55390.1| ubiquitin-conjugating enzyme E2 7-... 28.9 9.7 gi|115483148|ref|NP_001065167.1| Os10g0536000 [Oryza sativa (... 28.9 9.7 gi|18394114|ref|NP_563951.1| UBC1 (UBIQUITIN CARRIER PROTEIN ... 28.9 9.7 gi|18395424|ref|NP_565289.1| ATUBC2; ubiquitin conjugating en... 28.9 9.7
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 322 Number of extensions: 2 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 493 Length of database: 101054579 Length adjustment: 104 Effective length of query: 389 Effective length of database: 71586283 Effective search space: 4295176980 Effective search space used: 4295176980 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 63 (28.9 bits)