RID=1168943397-8275-130018124632.BLASTQ4, Contig254

BLASTX 2.2.15 [Oct-15-2006]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168943397-8275-130018124632.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters

If you have any problems or questions with the results of this search
please refer to the BLAST FAQs Taxonomy reports

Query=  Contig254
Length=543

Distribution of 27 Blast Hits on the Query Sequence

                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gi|108864437|gb|ABG22500.1|  Glycosyl hydrolases family 38 pro...  51.6    2e-06
gi|115485699|ref|NP_001067993.1|  Os11g0525600 [Oryza sativa (...  51.6    2e-06 
gi|15231611|ref|NP_189306.1|  alpha-mannosidase [Arabidopsis t...  45.4    1e-04 
gi|62319813|dbj|BAD93831.1|  alpha-mannosidase [Arabidopsis thali  40.0    0.005 
gi|79327811|ref|NP_001031878.1|  alpha-mannosidase [Arabidopsis t  40.0    0.005 
gi|22326796|ref|NP_196902.2|  alpha-mannosidase [Arabidopsis t...  40.0    0.005 
gi|10177664|dbj|BAB11126.1|  alpha-mannosidase [Arabidopsis thali  40.0    0.005
gi|110288592|gb|ABG65906.1|  glycosyl hydrolase family 38 prot...  33.9    0.37 
gi|115481094|ref|NP_001064140.1|  Os10g0140200 [Oryza sativa (...  33.9    0.37  
gi|110288591|gb|ABG65905.1|  glycosyl hydrolase family 38 prot...  33.9    0.37 
gi|18464022|gb|AAL73069.1|AC090873_15  Putative alpha-mannosid...  33.9    0.37 
gi|92886171|gb|ABE88173.1|  Glycosyl hydrolases family 38 C-te...  33.5    0.49 
gi|15239274|ref|NP_201416.1|  alpha-mannosidase [Arabidopsis t...  32.3    1.1   
gi|115460096|ref|NP_001053648.1|  Os04g0580500 [Oryza sativa (...  30.0    5.4

Alignments

 

>gi|108864437|gb|ABG22500.1|  Glycosyl hydrolases family 38 protein, expressed [Oryza sativa 
(japonica cultivar-group)]
Length=1018

 Score = 51.6 bits (122),  Expect = 2e-06
 Identities = 21/33 (63%), Positives = 25/33 (75%), Gaps = 0/33 (0%)
 Frame = +3

Query  15   QDGDEWANSRILSFSGMDPSYVLPDNVAMITLQ  113
            QDG  W NS +  FS MDP+Y LPDNVA++TLQ
Sbjct  875  QDGGNWVNSHVTKFSAMDPAYSLPDNVALLTLQ  907


 Score = 35.4 bits (80),  Expect = 0.13
 Identities = 16/18 (88%), Positives = 17/18 (94%), Gaps = 0/18 (0%)
 Frame = +2

Query  410  LQELDDGKVLLRLAHLYE  463
            LQEL+DG VLLRLAHLYE
Sbjct  906  LQELEDGTVLLRLAHLYE  923


>gi|115485699|ref|NP_001067993.1|  Os11g0525600 [Oryza sativa (japonica cultivar-group)]
 gi|77551210|gb|ABA94007.1|  Glycosyl hydrolases family 38 protein, expressed [Oryza sativa 
(japonica cultivar-group)]
 gi|113645215|dbj|BAF28356.1|  Os11g0525600 [Oryza sativa (japonica cultivar-group)]
Length=1020

 Score = 51.6 bits (122),  Expect = 2e-06
 Identities = 21/33 (63%), Positives = 25/33 (75%), Gaps = 0/33 (0%)
 Frame = +3

Query  15   QDGDEWANSRILSFSGMDPSYVLPDNVAMITLQ  113
            QDG  W NS +  FS MDP+Y LPDNVA++TLQ
Sbjct  877  QDGGNWVNSHVTKFSAMDPAYSLPDNVALLTLQ  909


 Score = 35.4 bits (80),  Expect = 0.13
 Identities = 16/18 (88%), Positives = 17/18 (94%), Gaps = 0/18 (0%)
 Frame = +2

Query  410  LQELDDGKVLLRLAHLYE  463
            LQEL+DG VLLRLAHLYE
Sbjct  908  LQELEDGTVLLRLAHLYE  925


>gi|15231611|ref|NP_189306.1|  alpha-mannosidase [Arabidopsis thaliana]
 gi|1888357|emb|CAA66821.1|  alpha-mannosidase [Arabidopsis thaliana]
 gi|1890154|emb|CAA72432.1|  alpha-mannosidase precursor [Arabidopsis thaliana]
 gi|11994305|dbj|BAB01735.1|  alpha-mannosidase [Arabidopsis thaliana]
 gi|14517403|gb|AAK62592.1|  AT3g26720/MLJ15_12 [Arabidopsis thaliana]
 gi|21360397|gb|AAM47314.1|  AT3g26720/MLJ15_12 [Arabidopsis thaliana]
Length=1019

 Score = 45.4 bits (106),  Expect = 1e-04
 Identities = 19/33 (57%), Positives = 24/33 (72%), Gaps = 0/33 (0%)
 Frame = +3

Query  15   QDGDEWANSRILSFSGMDPSYVLPDNVAMITLQ  113
            Q+GD W NS   +FS  +PSY LP NVA++TLQ
Sbjct  870  QEGDSWINSHKTTFSAFEPSYSLPKNVALLTLQ  902


 Score = 32.7 bits (73),  Expect = 0.83
 Identities = 14/18 (77%), Positives = 18/18 (100%), Gaps = 0/18 (0%)
 Frame = +2

Query  410  LQELDDGKVLLRLAHLYE  463
            LQEL++G+VLLRLAHL+E
Sbjct  901  LQELENGEVLLRLAHLFE  918


>gi|62319813|dbj|BAD93831.1|  alpha-mannosidase [Arabidopsis thaliana]
Length=180

 Score = 40.0 bits (92),  Expect = 0.005
 Identities = 17/21 (80%), Positives = 20/21 (95%), Gaps = 0/21 (0%)
 Frame = +3

Query  51   SFSGMDPSYVLPDNVAMITLQ  113
            SFSG+DPSY LPDNVA++TLQ
Sbjct  41   SFSGIDPSYSLPDNVALLTLQ  61


 Score = 37.4 bits (85),  Expect = 0.034
 Identities = 17/18 (94%), Positives = 17/18 (94%), Gaps = 0/18 (0%)
 Frame = +2

Query  410  LQELDDGKVLLRLAHLYE  463
            LQELDDG VLLRLAHLYE
Sbjct  60   LQELDDGNVLLRLAHLYE  77


>gi|79327811|ref|NP_001031878.1|  alpha-mannosidase [Arabidopsis thaliana]
Length=921

 Score = 40.0 bits (92),  Expect = 0.005
 Identities = 17/21 (80%), Positives = 20/21 (95%), Gaps = 0/21 (0%)
 Frame = +3

Query  51   SFSGMDPSYVLPDNVAMITLQ  113
            SFSG+DPSY LPDNVA++TLQ
Sbjct  885  SFSGIDPSYSLPDNVALLTLQ  905


 Score = 37.4 bits (85),  Expect = 0.034
 Identities = 17/18 (94%), Positives = 17/18 (94%), Gaps = 0/18 (0%)
 Frame = +2

Query  410  LQELDDGKVLLRLAHLYE  463
            LQELDDG VLLRLAHLYE
Sbjct  904  LQELDDGNVLLRLAHLYE  921


>gi|22326796|ref|NP_196902.2|  alpha-mannosidase [Arabidopsis thaliana]
 gi|79598781|ref|NP_851037.2|  alpha-mannosidase [Arabidopsis thaliana]
 gi|20466476|gb|AAM20555.1|  alpha-mannosidase [Arabidopsis thaliana]
 gi|23198186|gb|AAN15620.1|  alpha-mannosidase [Arabidopsis thaliana]
Length=1024

 Score = 40.0 bits (92),  Expect = 0.005
 Identities = 17/21 (80%), Positives = 20/21 (95%), Gaps = 0/21 (0%)
 Frame = +3

Query  51   SFSGMDPSYVLPDNVAMITLQ  113
            SFSG+DPSY LPDNVA++TLQ
Sbjct  885  SFSGIDPSYSLPDNVALLTLQ  905


 Score = 37.4 bits (85),  Expect = 0.034
 Identities = 17/18 (94%), Positives = 17/18 (94%), Gaps = 0/18 (0%)
 Frame = +2

Query  410  LQELDDGKVLLRLAHLYE  463
            LQELDDG VLLRLAHLYE
Sbjct  904  LQELDDGNVLLRLAHLYE  921


>gi|10177664|dbj|BAB11126.1|  alpha-mannosidase [Arabidopsis thaliana]
Length=1030

 Score = 40.0 bits (92),  Expect = 0.005
 Identities = 17/21 (80%), Positives = 20/21 (95%), Gaps = 0/21 (0%)
 Frame = +3

Query  51   SFSGMDPSYVLPDNVAMITLQ  113
            SFSG+DPSY LPDNVA++TLQ
Sbjct  891  SFSGIDPSYSLPDNVALLTLQ  911


 Score = 37.4 bits (85),  Expect = 0.034
 Identities = 17/18 (94%), Positives = 17/18 (94%), Gaps = 0/18 (0%)
 Frame = +2

Query  410  LQELDDGKVLLRLAHLYE  463
            LQELDDG VLLRLAHLYE
Sbjct  910  LQELDDGNVLLRLAHLYE  927


>gi|110288592|gb|ABG65906.1|  glycosyl hydrolase family 38 protein, putative, expressed [Oryza 
sativa (japonica cultivar-group)]
Length=873

 Score = 33.9 bits (76),  Expect = 0.37
 Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 0/33 (0%)
 Frame = +3

Query  15   QDGDEWANSRILSFSGMDPSYVLPDNVAMITLQ  113
            +D   W ++ I   S ++ +Y LPDNVA+ITLQ
Sbjct  740  EDERSWKSNNIAKASTVEGNYSLPDNVAIITLQ  772


 Score = 30.8 bits (68),  Expect = 3.2
 Identities = 13/18 (72%), Positives = 15/18 (83%), Gaps = 0/18 (0%)
 Frame = +2

Query  410  LQELDDGKVLLRLAHLYE  463
            LQ LDDG  LLRLAHL++
Sbjct  771  LQSLDDGTTLLRLAHLFQ  788


>gi|115481094|ref|NP_001064140.1|  Os10g0140200 [Oryza sativa (japonica cultivar-group)]
 gi|110288590|gb|ABG65904.1|  glycosyl hydrolase family 38 protein, putative, expressed [Oryza 
sativa (japonica cultivar-group)]
 gi|113638749|dbj|BAF26054.1|  Os10g0140200 [Oryza sativa (japonica cultivar-group)]
Length=1004

 Score = 33.9 bits (76),  Expect = 0.37
 Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 0/33 (0%)
 Frame = +3

Query  15   QDGDEWANSRILSFSGMDPSYVLPDNVAMITLQ  113
            +D   W ++ I   S ++ +Y LPDNVA+ITLQ
Sbjct  871  EDERSWKSNNIAKASTVEGNYSLPDNVAIITLQ  903


 Score = 30.8 bits (68),  Expect = 3.2
 Identities = 13/18 (72%), Positives = 15/18 (83%), Gaps = 0/18 (0%)
 Frame = +2

Query  410  LQELDDGKVLLRLAHLYE  463
            LQ LDDG  LLRLAHL++
Sbjct  902  LQSLDDGTTLLRLAHLFQ  919


>gi|110288591|gb|ABG65905.1|  glycosyl hydrolase family 38 protein, putative, expressed [Oryza 
sativa (japonica cultivar-group)]
Length=815

 Score = 33.9 bits (76),  Expect = 0.37
 Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 0/33 (0%)
 Frame = +3

Query  15   QDGDEWANSRILSFSGMDPSYVLPDNVAMITLQ  113
            +D   W ++ I   S ++ +Y LPDNVA+ITLQ
Sbjct  682  EDERSWKSNNIAKASTVEGNYSLPDNVAIITLQ  714


 Score = 30.8 bits (68),  Expect = 3.2
 Identities = 13/18 (72%), Positives = 15/18 (83%), Gaps = 0/18 (0%)
 Frame = +2

Query  410  LQELDDGKVLLRLAHLYE  463
            LQ LDDG  LLRLAHL++
Sbjct  713  LQSLDDGTTLLRLAHLFQ  730


>gi|18464022|gb|AAL73069.1|AC090873_15  Putative alpha-mannosidase [Oryza sativa]
 gi|19919971|gb|AAM08419.1|AC112513_5  Putative alpha-mannosidase [Oryza sativa]
Length=438

 Score = 33.9 bits (76),  Expect = 0.37
 Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 0/34 (0%)
 Frame = +3

Query  12   LQDGDEWANSRILSFSGMDPSYVLPDNVAMITLQ  113
            L D   W ++ I   S ++ +Y LPDNVA+ITLQ
Sbjct  304  LVDERSWKSNNIAKASTVEGNYSLPDNVAIITLQ  337


 Score = 30.8 bits (68),  Expect = 3.2
 Identities = 13/18 (72%), Positives = 15/18 (83%), Gaps = 0/18 (0%)
 Frame = +2

Query  410  LQELDDGKVLLRLAHLYE  463
            LQ LDDG  LLRLAHL++
Sbjct  336  LQSLDDGTTLLRLAHLFQ  353


>gi|92886171|gb|ABE88173.1|  Glycosyl hydrolases family 38 C-terminal domain, putative [Medicago 
truncatula]
Length=1018

 Score = 33.5 bits (75),  Expect = 0.49
 Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 0/28 (0%)
 Frame = +3

Query  30   WANSRILSFSGMDPSYVLPDNVAMITLQ  113
            W +S +   + MDP+Y LP NVA+ITL+
Sbjct  890  WKSSHLTKGTLMDPNYSLPPNVALITLE  917


 Score = 32.3 bits (72),  Expect = 1.1
 Identities = 15/18 (83%), Positives = 16/18 (88%), Gaps = 0/18 (0%)
 Frame = +2

Query  410  LQELDDGKVLLRLAHLYE  463
            L+ELD G VLLRLAHLYE
Sbjct  916  LEELDGGIVLLRLAHLYE  933


>gi|15239274|ref|NP_201416.1|  alpha-mannosidase [Arabidopsis thaliana]
 gi|10177130|dbj|BAB10420.1|  alpha-mannosidase [Arabidopsis thaliana]
Length=1047

 Score = 32.3 bits (72),  Expect = 1.1
 Identities = 15/18 (83%), Positives = 16/18 (88%), Gaps = 0/18 (0%)
 Frame = +2

Query  410  LQELDDGKVLLRLAHLYE  463
            L+ELD G VLLRLAHLYE
Sbjct  932  LEELDLGNVLLRLAHLYE  949


 Score = 30.0 bits (66),  Expect = 5.4
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 0/33 (0%)
 Frame = +3

Query  15   QDGDEWANSRILSFSGMDPSYVLPDNVAMITLQ  113
            ++ ++W  S  +    MD  Y LP N+A+ITL+
Sbjct  901  ENKEKWKASNTVKGYAMDHLYTLPQNIALITLE  933


>gi|115460096|ref|NP_001053648.1|  Os04g0580500 [Oryza sativa (japonica cultivar-group)]
 gi|38345868|emb|CAD41165.2|  OSJNBa0064M23.10 [Oryza sativa (japonica cultivar-group)]
 gi|113565219|dbj|BAF15562.1|  Os04g0580500 [Oryza sativa (japonica cultivar-group)]
Length=337

 Score = 30.0 bits (66),  Expect = 5.4
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 0/27 (0%)
 Frame = -1

Query  495  FKFNPLTKIPPSYKCANRRRTFPSSNS  415
            F F P TK+ P  +C  RR  FP+ +S
Sbjct  2    FTFTPATKMSPCCRCLTRRLLFPAMSS  28

  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding 
environmental samples
    Posted date:  Jan 15, 2007  4:53 AM
  Number of letters in database: 101,054,579
  Number of sequences in database:  283,349
Lambda     K      H
   0.318    0.134    0.401 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 283349
Number of Hits to DB: 389
Number of extensions: 5
Number of successful extensions: 0
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 0
Number of HSP's successfully gapped: 0
Length of query: 543
Length of database: 101054579
Length adjustment: 106
Effective length of query: 437
Effective length of database: 71019585
Effective search space: 5326468875
Effective search space used: 5326468875
T: 12
A: 40
X1: 16 (7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.4 bits)
S2: 64 (29.3 bits)