Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168943502-15626-194976473418.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig260 Length=536
Score E Sequences producing significant alignments: (Bits) Value gi|18411555|ref|NP_567210.1| unknown protein [Arabidopsis tha... 186 6e-47 gi|687677|gb|AAB00107.1| unknown 184 1e-46 gi|46390475|dbj|BAD15936.1| unknown protein [Oryza sativa (ja... 147 3e-35 gi|115467478|ref|NP_001057338.1| Os06g0264800 [Oryza sativa (... 136 5e-32 gi|115448483|ref|NP_001048021.1| Os02g0731600 [Oryza sativa (... 134 1e-31 gi|115476522|ref|NP_001061857.1| Os08g0430600 [Oryza sativa (... 134 1e-31 gi|115479645|ref|NP_001063416.1| Os09g0465800 [Oryza sativa (... 81.3 2e-15 gi|115472001|ref|NP_001059599.1| Os07g0469100 [Oryza sativa (... 80.5 3e-15 gi|87240857|gb|ABD32715.1| thylakoid membrane phosphoprotein ... 79.3 7e-15 gi|4467116|emb|CAB37550.1| hypothetical protein [Arabidopsis ... 78.2 2e-14 gi|18420175|ref|NP_568035.1| threonine endopeptidase [Arabido... 78.2 2e-14 gi|115467106|ref|NP_001057152.1| Os06g0217700 [Oryza sativa (... 76.3 6e-14 gi|115448811|ref|NP_001048185.1| Os02g0759900 [Oryza sativa (... 76.3 6e-14 gi|18407178|ref|NP_566086.1| TMP14 (THYLAKOID MEMBRANE PHOSPH... 75.9 8e-14 gi|21555057|gb|AAM63765.1| unknown [Arabidopsis thaliana] 74.3 2e-13 gi|115483154|ref|NP_001065170.1| Os10g0536500 [Oryza sativa (... 70.9 3e-12 gi|18403896|ref|NP_564603.1| unknown protein [Arabidopsis tha... 66.6 5e-11 gi|79319729|ref|NP_001031173.1| unknown protein [Arabidopsis tha 65.5 1e-10 gi|21554231|gb|AAM63306.1| unknown [Arabidopsis thaliana] 63.5 4e-10 gi|115440081|ref|NP_001044320.1| Os01g0761000 [Oryza sativa (... 53.5 4e-07 gi|116000281|emb|CAL49961.1| unnamed protein product [Ostreococc 53.1 6e-07 gi|14587304|dbj|BAB61215.1| P0460E08.25 [Oryza sativa (japoni... 53.1 6e-07 gi|116000637|emb|CAL50317.1| unnamed protein product [Ostreococc 37.0 0.042 gi|38569137|emb|CAE05666.3| OSJNBb0033P05.5 [Oryza sativa (japon 32.7 0.80 gi|77555638|gb|ABA98434.1| retrotransposon protein, putative,... 31.2 2.3 gi|77555636|gb|ABA98432.1| transposon protein, putative, CACT... 31.2 2.3 gi|46391037|dbj|BAD15980.1| hypothetical protein [Oryza sativa ( 31.2 2.3 gi|115471301|ref|NP_001059249.1| Os07g0236900 [Oryza sativa (... 30.8 3.0 gi|49387543|dbj|BAD25099.1| hypothetical protein [Oryza sativa ( 30.8 3.0 gi|33146678|dbj|BAC80073.1| putative RNA and export factor bi... 30.8 3.0 gi|32488915|emb|CAE04496.1| OSJNBb0059K02.6 [Oryza sativa (japon 30.8 3.0 gi|42570020|ref|NP_671833.2| unknown protein [Arabidopsis tha... 30.0 5.2 gi|29725864|gb|AAO89214.1| hypothetical protein [Arabidopsis tha 30.0 5.2 gi|116310136|emb|CAH67152.1| OSIGBa0122F23.9 [Oryza sativa (indi 29.6 6.8 gi|115459794|ref|NP_001053497.1| Os04g0551500 [Oryza sativa (... 29.6 6.8 gi|21397271|gb|AAM51835.1|AC105730_9 Putative plant disease r... 29.6 6.8 gi|50251752|dbj|BAD27685.1| hypothetical protein [Oryza sativa ( 29.6 6.8 gi|38175647|dbj|BAD01354.1| hypothetical protein [Oryza sativ... 29.6 6.8 gi|116058986|emb|CAL54693.1| Translation initiation factor 3,... 29.3 8.8 gi|115464747|ref|NP_001055973.1| Os05g0502000 [Oryza sativa (... 29.3 8.8 gi|77556076|gb|ABA98872.1| hypothetical protein LOC_Os12g3613... 29.3 8.8 gi|55771305|dbj|BAD72214.1| hypothetical protein [Oryza sativ... 29.3 8.8 gi|37573002|dbj|BAC98694.1| hypothetical protein [Oryza sativa ( 29.3 8.8 gi|34394771|dbj|BAC84144.1| hypothetical protein [Oryza sativ... 29.3 8.8
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 433 Number of extensions: 9 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 536 Length of database: 101054579 Length adjustment: 106 Effective length of query: 430 Effective length of database: 71019585 Effective search space: 5113410120 Effective search space used: 5113410120 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)