Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168943530-30465-9093230841.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig262 Length=541
Score E Sequences producing significant alignments: (Bits) Value gi|115477529|ref|NP_001062360.1| Os08g0536000 [Oryza sativa (... 199 4e-51 gi|3850999|gb|AAC72192.1| pyruvate dehydrogenase E1 beta subunit 199 5e-51 gi|3851001|gb|AAC72193.1| pyruvate dehydrogenase E1 beta subunit 197 1e-50 gi|3851003|gb|AAC72194.1| pyruvate dehydrogenase E1 beta subunit 196 3e-50 gi|115480067|ref|NP_001063627.1| Os09g0509200 [Oryza sativa (... 196 6e-50 gi|15241286|ref|NP_199898.1| pyruvate dehydrogenase (acetyl-t... 194 2e-49 gi|520478|gb|AAA52225.1| pyruvate dehydrogenase E1 beta subun... 194 2e-49 gi|1709454|sp|P52904|ODPB_PEA Pyruvate dehydrogenase E1 compo... 193 4e-49 gi|116058357|emb|CAL53546.1| Branched chain alpha-keto acid d... 160 3e-39 gi|55792499|gb|AAV65347.1| plastid pyruvate dehydrogenase E1 ... 107 3e-23 gi|108773225|ref|YP_635737.1| beta subunit of pyruvate dehydr... 104 2e-22 gi|2454184|gb|AAB86804.1| pyruvate dehydrogenase E1 beta subu... 103 4e-22 gi|108796799|ref|YP_636456.1| beta subunit of pyruvate dehydr... 103 4e-22 gi|15220670|ref|NP_174304.1| PDH-E1 BETA (PYRUVATE DEHYDROGEN... 103 4e-22 gi|15226781|ref|NP_181006.1| transketolase [Arabidopsis thali... 102 6e-22 gi|22711921|ref|NP_683783.1| pyruvate dehydrogenase E1 compon... 102 6e-22 gi|21593379|gb|AAM65328.1| putative pyruvate dehydrogenase E1... 102 1e-21 gi|108710070|gb|ABF97865.1| Pyruvate dehydrogenase E1 compone... 100 4e-21 gi|108796697|ref|YP_636504.1| beta subunit of pyruvate dehydr... 99.8 5e-21 gi|115489596|ref|NP_001067285.1| Os12g0616900 [Oryza sativa (... 97.8 2e-20 gi|11466393|ref|NP_038396.1| pyruvate dehydrogenase E1 compon... 92.8 7e-19 gi|115454325|ref|NP_001050763.1| Os03g0645100 [Oryza sativa (... 88.2 2e-17 gi|15231242|ref|NP_187954.1| DIN4 (DARK INDUCIBLE 4); 3-methy... 72.0 1e-12 gi|15222731|ref|NP_175947.1| BCDH BETA1 (BRANCHED-CHAIN ALPHA... 70.9 3e-12 gi|2982328|gb|AAC32149.1| pyruvate dehydrogenase E1 beta subunit 70.5 4e-12 gi|3746568|gb|AAC64005.1| branched-chain alpha-keto acid deca... 69.7 6e-12 gi|115470781|ref|NP_001058989.1| Os07g0170100 [Oryza sativa (... 65.5 1e-10 gi|92871781|gb|ABE80687.1| TonB box, N-terminal [Medicago trunca 58.9 1e-08 gi|116055692|emb|CAL57777.1| Branched chain alpha-keto acid d... 57.4 3e-08 gi|92871786|gb|ABE80692.1| pyruvate dehydrogenase e1 componen... 37.0 0.044 gi|117553508|gb|ABK35283.1| deoxyxylulose-5-phosphate synthas... 31.6 1.8 gi|61656095|gb|AAX49358.1| 1-deoxy-D-xylulose 5-phosphate syntha 31.2 2.4 gi|66271903|gb|AAY43920.1| phospholipid:sterol acyl transferase 30.8 3.1 gi|6579210|gb|AAF18253.1|AC011438_15 T23G18.7 [Arabidopsis thali 30.8 3.1 gi|118776428|gb|ABL14231.1| ribosomal protein S14 [Metzgeria con 30.4 4.1 gi|38260042|gb|AAR15338.1| hypothetical protein [Casuarina equis 30.4 4.1 gi|16930804|gb|AAL32062.1|AF443590_1 deoxy-D-xylulose-5-phosphat 30.4 4.1 gi|87299429|dbj|BAE79547.1| 1-deoxyxylulose 5-phosphate synth... 30.4 4.1 gi|118776426|gb|ABL14230.1| ribosomal protein S14 [Metzgeria myr 30.0 5.3 gi|92885930|gb|ABE87974.1| Zinc knuckle, putative [Medicago trun 30.0 5.3 gi|66865825|gb|AAY57561.1| liguleless 3 [Zea mays] 30.0 5.3 gi|75319612|sp|Q41382|RH7_SPIOL DEAD-box ATP-dependent RNA he... 30.0 5.3 gi|4240539|gb|AAD13611.1| knotted class 1 homeodomain protein li 30.0 5.3 gi|115470975|ref|NP_001059086.1| Os07g0190000 [Oryza sativa (... 30.0 5.3 gi|92874642|gb|ABE82879.1| Protein of unknown function DUF604 [M 29.6 6.9 gi|92873230|gb|ABE81721.1| Protein of unknown function DUF604 [M 29.6 6.9 gi|72255607|gb|AAZ66925.1| 117M18_6 [Brassica rapa] 29.6 6.9 gi|22797427|emb|CAD22155.2| 1-deoxy-D-xylulose 5-phosphate synth 29.6 6.9 gi|40317612|gb|AAP14354.2| 1-deoxy-D-xylulose-5-phosphate syn... 29.3 9.1 gi|30348875|gb|AAP31414.1|AF457125_1 knotted1-like homeodomain p 29.3 9.1 gi|72384451|gb|AAZ67567.1| 52O08_21 [Brassica rapa subsp. pekine 29.3 9.1 gi|115447929|ref|NP_001047744.1| Os02g0681100 [Oryza sativa (... 29.3 9.1
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 393 Number of extensions: 1 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 541 Length of database: 101054579 Length adjustment: 106 Effective length of query: 435 Effective length of database: 71019585 Effective search space: 5255449290 Effective search space used: 5255449290 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)