Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168943613-24945-126443364202.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig268 Length=193
Score E Sequences producing significant alignments: (Bits) Value gi|38016525|gb|AAR07598.1| fiber protein Fb19 [Gossypium barbade 65.9 4e-11 gi|18407428|ref|NP_566108.1| unknown protein [Arabidopsis tha... 62.8 4e-10 gi|21555580|gb|AAM63890.1| unknown [Arabidopsis thaliana] 62.8 4e-10 gi|115488992|ref|NP_001066983.1| Os12g0552500 [Oryza sativa (... 55.1 7e-08 gi|15239780|ref|NP_199716.1| unknown protein [Arabidopsis tha... 53.9 2e-07 gi|4704826|gb|AAD28288.1|AF139378_1 LlDD2A18 [Lupinus luteus] 52.4 5e-07 gi|115488990|ref|NP_001066982.1| Os12g0552400 [Oryza sativa (... 49.7 3e-06 gi|46949192|gb|AAT07452.1| putative universal stress protein [Mi 48.9 5e-06 gi|92878438|gb|ABE85050.1| Universal stress protein (Usp) [Medic 47.4 2e-05 gi|20067187|gb|AAM09541.1|AF491815_1 putative universal stres... 45.8 5e-05 gi|29367533|gb|AAO72622.1| unknown [Oryza sativa (japonica culti 45.4 6e-05 gi|115474017|ref|NP_001060607.1| Os07g0673400 [Oryza sativa (... 45.4 6e-05 gi|15228790|ref|NP_191814.1| unknown protein [Arabidopsis tha... 35.8 0.047 gi|79313191|ref|NP_001030675.1| unknown protein [Arabidopsis tha 35.8 0.047 gi|30681959|ref|NP_850563.1| unknown protein [Arabidopsis thalia 35.8 0.047 gi|18399413|ref|NP_566406.1| unknown protein [Arabidopsis thalia 35.8 0.047 gi|30681955|ref|NP_850562.1| unknown protein [Arabidopsis tha... 35.8 0.047 gi|115482168|ref|NP_001064677.1| Os10g0437500 [Oryza sativa (... 33.5 0.23 gi|6735362|emb|CAB68183.1| putative protein [Arabidopsis thalian 32.7 0.40 gi|30694813|ref|NP_850717.1| unknown protein [Arabidopsis thalia 32.7 0.40 gi|30694811|ref|NP_191404.2| unknown protein [Arabidopsis tha... 32.7 0.40 gi|92873020|gb|ABE81527.1| Protein kinase; UspA [Medicago tru... 32.3 0.52 gi|55792398|gb|AAV65310.1| universal stress protein [Hordeum vul 32.0 0.68 gi|116058643|emb|CAL54350.1| unnamed protein product [Ostreococc 31.6 0.89 gi|71913177|gb|AAZ53091.1| maturase K [Microcoelia physophora] 31.2 1.2 gi|5107827|gb|AAD40140.1|AF149413_21 contains similarity to p... 31.2 1.2 gi|15239600|ref|NP_197987.1| ATP binding / kinase/ protein ki... 31.2 1.2 gi|18408994|ref|NP_564927.1| unknown protein [Arabidopsis tha... 31.2 1.2 gi|115448821|ref|NP_001048190.1| Os02g0760500 [Oryza sativa (... 31.2 1.2 gi|21594903|gb|AAM66054.1| ethylene-responsive protein, putative 30.8 1.5 gi|92867991|gb|ABE78101.1| universal stress protein family [Medi 30.4 2.0 gi|115463381|ref|NP_001055290.1| Os05g0355400 [Oryza sativa (... 29.6 3.4 gi|15233295|ref|NP_188857.1| metal ion binding [Arabidopsis thal 29.6 3.4 gi|115469854|ref|NP_001058526.1| Os06g0707300 [Oryza sativa (... 29.6 3.4 gi|18423628|ref|NP_568808.1| unknown protein [Arabidopsis tha... 29.6 3.4 gi|8885586|dbj|BAA97516.1| unnamed protein product [Arabidopsis 29.6 3.4 gi|11994737|dbj|BAB03066.1| unnamed protein product [Arabidopsis 29.6 3.4 gi|3269293|emb|CAA19726.1| putative protein [Arabidopsis thal... 29.3 4.4 gi|62911453|gb|AAY21379.1| maturase K [Ranunculus ficaria subsp. 29.3 4.4 gi|51969908|dbj|BAD43646.1| unknown protein [Arabidopsis thalian 29.3 4.4 gi|51970852|dbj|BAD44118.1| unknown protein [Arabidopsis thalian 29.3 4.4 gi|51971917|dbj|BAD44623.1| unknown protein [Arabidopsis thalian 29.3 4.4 gi|51971835|dbj|BAD44582.1| unknown protein [Arabidopsis thalian 29.3 4.4 gi|51968678|dbj|BAD43031.1| unknown protein [Arabidopsis thalian 29.3 4.4 gi|18416966|ref|NP_567770.1| unknown protein [Arabidopsis tha... 29.3 4.4 gi|63253865|gb|AAY40189.1| maturase K [Pedicularis rex] 28.9 5.7 gi|53982304|gb|AAV25283.1| hypothetical protein [Oryza sativa (j 28.9 5.7 gi|1935912|gb|AAC49678.1| lethal leaf-spot 1 [Zea mays] 28.9 5.7 gi|115436154|ref|NP_001042835.1| Os01g0303800 [Oryza sativa (... 28.9 5.7 gi|115441365|ref|NP_001044962.1| Os01g0875300 [Oryza sativa (... 28.9 5.7 gi|116059222|emb|CAL54929.1| Chromatin remodeling complex WST... 28.5 7.5 gi|7573367|emb|CAB87673.1| putative receptor-like kinase [Arabid 28.5 7.5 gi|29468345|gb|AAO85512.1| CSN3 [Nicotiana benthamiana] 28.5 7.5 gi|79511817|ref|NP_196761.2| kinase [Arabidopsis thaliana] >g... 28.5 7.5 gi|15219439|ref|NP_175097.1| unknown protein [Arabidopsis tha... 28.5 7.5 gi|77994685|gb|ABB13620.1| USP-like protein [Astragalus sinicus] 28.1 9.8 gi|115456755|ref|NP_001051978.1| Os03g0861100 [Oryza sativa (... 28.1 9.8 gi|63253949|gb|AAY40231.1| maturase K [Pedicularis thamnophila] 28.1 9.8 gi|63253903|gb|AAY40208.1| maturase K [Pedicularis cyathophylla] 28.1 9.8 gi|31193925|gb|AAP44760.1| hypothetical protein [Oryza sativa (j 28.1 9.8 gi|5669654|gb|AAD46412.1|AF096262_1 ER6 protein [Lycopersicon es 28.1 9.8 gi|1935909|gb|AAC49676.1| lethal leaf-spot 1 [Zea mays] 28.1 9.8 gi|115447655|ref|NP_001047607.1| Os02g0653900 [Oryza sativa (... 28.1 9.8 gi|115436928|ref|NP_001043170.1| Os01g0511100 [Oryza sativa (... 28.1 9.8 gi|14140134|emb|CAC39051.1| lipase-like protein [Oryza sativa] 28.1 9.8
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 115 Number of extensions: 2 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 193 Length of database: 101054579 Length adjustment: 36 Effective length of query: 157 Effective length of database: 90854015 Effective search space: 2543912420 Effective search space used: 2543912420 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 61 (28.1 bits)