Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168943748-14731-41219526103.BLASTQ4 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig273 Length=508
Score E Sequences producing significant alignments: (Bits) Value gi|18390408|ref|NP_563710.1| unknown protein [Arabidopsis tha... 200 2e-51 gi|310570|gb|AAC37469.1| a Lea protein with hydrophobic domai... 200 3e-51 gi|6851373|gb|AAF29532.1|AF218627_1 plasma membrane associated p 167 2e-41 gi|1724112|gb|AAB38504.1| ABA induced plasma membrane protein PM 165 9e-41 gi|115471773|ref|NP_001059485.1| Os07g0422100 [Oryza sativa (... 164 2e-40 gi|115463597|ref|NP_001055398.1| Os05g0381400 [Oryza sativa (... 162 6e-40 gi|115448481|ref|NP_001048020.1| Os02g0731500 [Oryza sativa (... 120 3e-27 gi|15218953|ref|NP_174245.1| unknown protein [Arabidopsis tha... 87.0 3e-17 gi|92872526|gb|ABE81135.1| AWPM-19-like [Medicago truncatula] 86.7 4e-17 gi|115482400|ref|NP_001064793.1| Os10g0464300 [Oryza sativa (... 86.7 4e-17 gi|115439403|ref|NP_001043981.1| Os01g0699900 [Oryza sativa (... 86.3 5e-17 gi|115435644|ref|NP_001042580.1| Os01g0247900 [Oryza sativa (... 84.7 2e-16 gi|15239619|ref|NP_197398.1| unknown protein [Arabidopsis tha... 82.0 1e-15 gi|5042452|gb|AAD38289.1|AC007789_15 putative ABA induced pla... 81.6 1e-15 gi|50878365|gb|AAT85140.1| unknown protein [Oryza sativa (japoni 79.7 5e-15 gi|15237455|ref|NP_199465.1| unknown protein [Arabidopsis tha... 72.0 1e-12 gi|18129294|emb|CAC83360.1| putative hydrophobic LEA-like protei 39.7 0.006 gi|40539017|gb|AAR87274.1| putative RING-H2 zinc finger prote... 35.0 0.14 gi|92871705|gb|ABE80636.1| hypothetical protein MtrDRAFT_AC13... 30.8 2.7 gi|22093735|dbj|BAC07028.1| putative o-methyltransferase [Ory... 30.8 2.7 gi|2661460|emb|CAA05921.1| ABI3 [Populus trichocarpa] 30.0 4.6 gi|2661462|emb|CAA05922.1| ABI3 [Populus trichocarpa] 30.0 4.6 gi|50428645|gb|AAT76996.1| putative PB1 domain containing pro... 29.3 7.9 gi|6650716|gb|AAF21982.1|AF115543_1 AUX1-like protein [Populus t 29.3 7.9 gi|18139937|gb|AAL60199.1|AF443205_1 serine/threonine protein ki 29.3 7.9
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 343 Number of extensions: 9 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 508 Length of database: 101054579 Length adjustment: 105 Effective length of query: 403 Effective length of database: 71302934 Effective search space: 4563387776 Effective search space used: 4563387776 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 63 (28.9 bits)