Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. RID: 1168944134-31756-134460962310.BLASTQ1 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples 4,458,890 sequences; 1,532,996,420 total letters If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
If you have any problems or questions with the results of this search please refer to the BLAST FAQs Taxonomy reports
Query= Contig283 Length=554
Score E Sequences producing significant alignments: (Bits) Value gi|18395825|ref|NP_564242.1| inositol or phosphatidylinositol... 149 8e-36 gi|92894700|gb|ABE92357.1| Phosphatidylinositol 3- and 4-kina... 147 2e-35 gi|110739504|dbj|BAF01661.1| hypothetical protein [Arabidopsis t 114 3e-25 gi|42570679|ref|NP_973413.1| inositol or phosphatidylinositol... 114 3e-25 gi|18395629|ref|NP_565307.1| inositol or phosphatidylinositol... 114 3e-25 gi|115467596|ref|NP_001057397.1| Os06g0283400 [Oryza sativa (... 103 3e-22 gi|18394020|ref|NP_563930.1| inositol or phosphatidylinositol... 93.6 4e-19 gi|8920569|gb|AAF81291.1|AC027656_8 Strong similarity to an u... 93.6 4e-19 gi|115479727|ref|NP_001063457.1| Os09g0474800 [Oryza sativa (... 90.1 5e-18 gi|115461194|ref|NP_001054197.1| Os04g0668700 [Oryza sativa (... 81.3 2e-15 gi|90657540|gb|ABD96840.1| hypothetical protein [Cleome spinosa] 75.5 1e-13 gi|115477024|ref|NP_001062108.1| Os08g0489800 [Oryza sativa (... 74.7 2e-13 gi|15226765|ref|NP_181617.1| inositol or phosphatidylinositol... 40.0 0.005 gi|19310381|gb|AAL84930.1| At2g40850/T20B5.5 [Arabidopsis thalia 37.4 0.035 gi|99014570|emb|CAK22275.1| putative phosphatidylinositol kinase 36.6 0.060 gi|110739176|dbj|BAF01504.1| hypothetical protein [Arabidopsis t 33.9 0.39 gi|15228965|ref|NP_191219.1| inositol or phosphatidylinositol... 33.9 0.39 gi|115435892|ref|NP_001042704.1| Os01g0270700 [Oryza sativa (... 33.5 0.51 gi|18568239|gb|AAL75976.1|AF466203_5 putative pol protein [Zea m 30.8 3.3 gi|92891283|gb|ABE90750.1| Eukaryotic aspartyl protease, putativ 30.4 4.3 gi|4185310|gb|AAD09017.1| gag protein [Zea mays] 30.4 4.3 gi|52075737|dbj|BAD44957.1| hypothetical protein [Oryza sativ... 30.4 4.3 gi|116256765|sp|Q9FZ92|RH44_ARATH Putative DEAD-box ATP-dependen 30.0 5.6 gi|9795619|gb|AAF98437.1|AC021044_16 Similar to RNA helicases [A 30.0 5.6 gi|53793334|dbj|BAD54555.1| hypothetical protein [Oryza sativa ( 30.0 5.6 gi|115449177|ref|NP_001048368.1| Os02g0793300 [Oryza sativa (... 30.0 5.6 gi|42571295|ref|NP_973738.1| SPL8 (SQUAMOSA PROMOTER BINDING ... 29.6 7.3 gi|22329284|ref|NP_683267.1| SPL8 (SQUAMOSA PROMOTER BINDING ... 29.6 7.3 gi|218302|dbj|BAA02261.1| reverse transcriptase [Nicotiana tabac 29.6 7.3 gi|26451395|dbj|BAC42797.1| putative squamosa promoter bindin... 29.6 7.3 gi|116309804|emb|CAH66843.1| H0525C06.6 [Oryza sativa (indica cu 29.3 9.6 gi|110737392|dbj|BAF00640.1| Calmodulin-binding transcription... 29.3 9.6 gi|115460566|ref|NP_001053883.1| Os04g0616900 [Oryza sativa (... 29.3 9.6 gi|115458570|ref|NP_001052885.1| Os04g0442900 [Oryza sativa (... 29.3 9.6 gi|3645898|gb|AAC49501.1| Gag [Zea mays] 29.3 9.6 gi|77557165|gb|ABA99961.1| retrotransposon protein, putative,... 29.3 9.6 gi|18254418|gb|AAL66759.1|AF464738_10 putative pol protein [Zea 29.3 9.6 gi|15242417|ref|NP_196503.1| EICBP.B; calmodulin binding / tr... 29.3 9.6
Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples Posted date: Jan 15, 2007 4:53 AM Number of letters in database: 101,054,579 Number of sequences in database: 283,349 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 283349 Number of Hits to DB: 353 Number of extensions: 7 Number of successful extensions: 0 Number of sequences better than 10: 0 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 0 Number of HSP's successfully gapped: 0 Length of query: 554 Length of database: 101054579 Length adjustment: 106 Effective length of query: 448 Effective length of database: 71019585 Effective search space: 5539527630 Effective search space used: 5539527630 T: 12 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 64 (29.3 bits)